BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	459,379	T→C	R164R (CGT→CGC)	lon →	Lon protease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	459,379	0	T	C	100.0%	377.1 / NA	106	R164R (CGT→CGC)	lon	Lon protease
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (42/64); total (42/64)

Only 100 of 107 total aligned reads displayed.

CGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGG  >  NC_000913/459243‑459512

cGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTg                                                                                                                                    >  1:917283/1‑140 (MQ=255)

cGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTg                                                                                                                                    >  1:112405/1‑140 (MQ=255)

cGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTg                                                                                                                                    >  1:713730/1‑140 (MQ=255)

cGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTg                                                                                                                                    <  1:363814/140‑1 (MQ=255)

 gCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTgg                                                                                                                                   >  2:1381035/1‑140 (MQ=255)

 gCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTgg                                                                                                                                   >  1:822619/1‑140 (MQ=255)

 gCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTgg                                                                                                                                   >  1:282265/1‑140 (MQ=255)

  ccGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGc                                                                                                                                  >  1:1034860/1‑140 (MQ=255)

  ccGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGc                                                                                                                                  <  2:287869/140‑1 (MQ=255)

   cGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCg                                                                                                                                 <  2:811839/140‑1 (MQ=255)

   cGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCg                                                                                                                                 <  1:152636/140‑1 (MQ=255)

   cGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCg                                                                                                                                 <  1:326845/140‑1 (MQ=255)

      ccATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGAt                                                                                                                              >  2:736955/1‑140 (MQ=255)

        aTTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATAc                                                                                                                            <  1:343623/140‑1 (MQ=255)

        aTTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATAc                                                                                                                            <  1:1381035/140‑1 (MQ=255)

        aTTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATAc                                                                                                                            <  2:732773/140‑1 (MQ=255)

         ttGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATAcc                                                                                                                           <  2:1055462/140‑1 (MQ=255)

          tgatgaGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAACAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCa                                                                                                                          <  1:1233045/140‑1 (MQ=255)

          tgatgaGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCa                                                                                                                          <  1:261449/140‑1 (MQ=255)

          tgatgaGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCa                                                                                                                          <  1:421313/140‑1 (MQ=255)

          tgatgaGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCa                                                                                                                          <  1:801135/140‑1 (MQ=255)

          tgatgaGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCa                                                                                                                          <  1:1335007/140‑1 (MQ=255)

            atgaGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCAtt                                                                                                                        <  2:817341/140‑1 (MQ=255)

              gaGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATtgc                                                                                                                      <  1:1383419/140‑1 (MQ=255)

               aGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATtgct                                                                                                                     <  2:503989/140‑1 (MQ=255)

                 cGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGa                                                                                                                               <  1:89030/128‑1 (MQ=255)

                 cGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGa                                                                                                                               >  2:89030/1‑128 (MQ=255)

                 cGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGAt                                                                                                                              >  1:108050/1‑129 (MQ=255)

                 cGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGAt                                                                                                                              <  2:108050/129‑1 (MQ=255)

                 cGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATtgctgc                                                                                                                   >  1:1130277/1‑140 (MQ=255)

                   ggAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCAt                                                                                                                         >  2:947334/1‑132 (MQ=255)

                   ggAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCAt                                                                                                                         <  1:947334/132‑1 (MQ=255)

                       cAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACatat                                                                                                             <  2:1130277/140‑1 (MQ=255)

                       cAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACatat                                                                                                             <  2:713730/140‑1 (MQ=255)

                           aaGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCg                                                                                                         <  2:367556/140‑1 (MQ=255)

                                cTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGaa                                                                                                    >  2:750358/1‑140 (MQ=255)

                                cTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGaa                                                                                                    >  2:3517/1‑140 (MQ=255)

                                       gTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCt                                                                                             <  2:1380219/140‑1 (MQ=255)

                                        tACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTg                                                                                            <  2:1385169/140‑1 (MQ=255)

                                        tACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTg                                                                                            >  2:569555/1‑140 (MQ=255)

                                          cTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGAc                                                                                          >  1:332910/1‑140 (MQ=255)

                                          cTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGAc                                                                                          >  2:557263/1‑140 (MQ=255)

                                            gCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACaa                                                                                        <  1:56155/140‑1 (MQ=255)

                                             cAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACaaa                                                                                       <  1:1340444/140‑1 (MQ=255)

                                                tCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAg                                                                                    >  1:347175/1‑140 (MQ=255)

                                                tCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAg                                                                                    >  1:756217/1‑140 (MQ=255)

                                                tCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAg                                                                                    <  2:282265/140‑1 (MQ=255)

                                                 cAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGt                                                                                   <  2:1150792/140‑1 (MQ=255)

                                                 cAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGt                                                                                   <  2:525500/140‑1 (MQ=255)

                                                 cAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGt                                                                                   <  2:402811/140‑1 (MQ=255)

                                                 cAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGt                                                                                   <  1:73181/140‑1 (MQ=255)

                                                 cAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGt                                                                                   <  2:822619/140‑1 (MQ=255)

                                                 cAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGt                                                                                   <  1:557263/140‑1 (MQ=255)

                                                 cAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGt                                                                                   <  2:395005/140‑1 (MQ=255)

                                                       gTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACATACAGt                                                                                   >  1:1332917/1‑134 (MQ=255)

                                                       gTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGt                                                                                   <  2:1332917/134‑1 (MQ=255)

                                                                  aCATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTcc                                                                  >  1:1383823/1‑140 (MQ=255)

                                                                         gCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTa                                                           >  1:1106338/1‑140 (MQ=255)

                                                                         gCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTa                                                           >  2:555765/1‑140 (MQ=255)

                                                                          cTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTaa                                                          <  2:481894/140‑1 (MQ=255)

                                                                            gAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTaacg                                                        <  1:560767/140‑1 (MQ=255)

                                                                             aaCAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGTAGATGTCCGACGTTaacg                                                        <  2:242847/139‑1 (MQ=255)

                                                                             aaCAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGTAGATGTCCGACGTTaacg                                                        >  1:242847/1‑139 (MQ=255)

                                                                             aaCAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTaacga                                                       >  1:867013/1‑140 (MQ=255)

                                                                             aaCAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTaacga                                                       >  1:438257/1‑140 (MQ=255)

                                                                             aaCAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTaacga                                                       >  2:777141/1‑140 (MQ=255)

                                                                               cAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCTCATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTaacgaac                                                     <  1:1140674/140‑1 (MQ=255)

                                                                                aaaaaaaTCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTaacgaacg                                                    <  1:444872/140‑1 (MQ=255)

                                                                                aaaaaaaTCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTaacgaacg                                                    <  1:750358/140‑1 (MQ=255)

                                                                                aaaaaaaTCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTaacgaacg                                                    <  2:828911/140‑1 (MQ=255)

                                                                                 aaaaaaTCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGt                                                   <  2:1364075/140‑1 (MQ=255)

                                                                                  aaaaaTCCCACCGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTc                                                  <  2:347175/140‑1 (MQ=255)

                                                                                  aaaaaTCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTc                                                  <  2:438257/140‑1 (MQ=255)

                                                                                       tCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGaa                                             >  1:396219/1‑140 (MQ=255)

                                                                                             caGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTg                                       <  2:332910/140‑1 (MQ=255)

                                                                                             caGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTg                                       <  1:1271538/140‑1 (MQ=255)

                                                                                               gAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGAt                                     <  1:28017/140‑1 (MQ=255)

                                                                                               gAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGAt                                     <  2:458884/140‑1 (MQ=255)

                                                                                                  gTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGc                                  >  2:254220/1‑140 (MQ=255)

                                                                                                     cTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAat                               >  1:1022220/1‑140 (MQ=255)

                                                                                                     cTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAat                               >  1:533978/1‑140 (MQ=255)

                                                                                                     cTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAat                               >  1:676569/1‑140 (MQ=255)

                                                                                                     cTGACGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAat                               >  1:820464/1‑140 (MQ=255)

                                                                                                         cGTCGCTGAATAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAGACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAatgatg                           <  2:112405/140‑1 (MQ=255)

                                                                                                                 aaTAGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGa                   <  1:569555/140‑1 (MQ=255)

                                                                                                                    agaaTCGACGATCCCGCGCGCCTGGCGGATGCCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAAt                <  2:867013/137‑1 (MQ=255)

                                                                                                                    aGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAAt                >  2:1349786/1‑140 (MQ=255)

                                                                                                                    aGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAAt                <  2:676569/140‑1 (MQ=255)

                                                                                                                    aGCATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAAt                <  2:1022220/140‑1 (MQ=255)

                                                                                                                      cATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCg              >  2:1378224/1‑140 (MQ=255)

                                                                                                                      cATCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCg              >  1:1162578/1‑140 (MQ=255)

                                                                                                                        tCGACGATCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGAt            <  2:258069/140‑1 (MQ=255)

                                                                                                                           acgaTCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATctg         <  1:1349786/140‑1 (MQ=255)

                                                                                                                              aTCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATctgctg      <  2:756217/140‑1 (MQ=255)

                                                                                                                              aTCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATctgctg      >  2:305925/1‑140 (MQ=255)

                                                                                                                               tCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCtgctgc     <  2:533978/140‑1 (MQ=255)

                                                                                                                               tCCGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCtgctgc     >  1:1248771/1‑140 (MQ=255)

                                                                                                                                ccGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCa    <  1:305925/140‑1 (MQ=255)

                                                                                                                                 cGGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAg   >  1:546650/1‑140 (MQ=255)

                                                                                                                                  ggCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAgg  >  1:338323/1‑140 (MQ=255)

CGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGG  >  NC_000913/459243‑459512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`