Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,484,128	C→T	R51R (CGG→CGA)	holC ←	DNA polymerase III subunit chi

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,484,128	0	C	T	100.0%	334.4 / NA	94	R51R (CGG→CGA)	holC	DNA polymerase III subunit chi
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (51/43);  total (51/43)

CAATATATCGCGCCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGCCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAGCCATCGACGGTGGTGTCATTGTCCAGAAGGTA  >  NC_000913/4483993‑4484262                                                                                                                                        |                                                                                                                                       cAATATATCGCGCCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGt                                                                                                                                    <  1:1379425/140‑1 (MQ=255)  aaTATATCGCGCCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTa                                                                                                                                   <  1:1000896/140‑1 (MQ=255)    tatatCGCGCCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAg                                                                                                                                 <  2:2853/140‑1 (MQ=255)     atatCGCGCCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGc                                                                                                                                <  2:1367886/140‑1 (MQ=255)     atatCGCGCCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGc                                                                                                                                >  1:829588/1‑140 (MQ=255)     atatCGCGCCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGc                                                                                                                                >  2:714669/1‑140 (MQ=255)     atatCGCGCCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTAATCCAGTCGGTAAGc                                                                                                                                >  1:934483/1‑140 (MQ=255)      tatCGCGCCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGcc                                                                                                                               <  1:473857/140‑1 (MQ=255)       atCGCGCCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCt                                                                                                                              >  2:874846/1‑140 (MQ=255)       atCGCGCCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCt                                                                                                                              >  1:752162/1‑140 (MQ=255)       atCGCGCCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCt                                                                                                                              >  1:381202/1‑140 (MQ=255)       atCGCGCCGGCTGCTGCTACGCTTTTGCGGCCAGACGATCTCCACCGGTGCACCGCCTCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCt                                                                                                                              >  2:1252323/1‑140 (MQ=255)         cgcgCCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGc                                                                                                                            >  2:1410642/1‑140 (MQ=255)         cgcgCCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGc                                                                                                                            >  2:920675/1‑140 (MQ=255)         cgcgCCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGc                                                                                                                            >  1:46354/1‑140 (MQ=255)         cgcgCCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGc                                                                                                                            >  1:662721/1‑140 (MQ=255)           cgcCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCtt                                                                                                                          >  1:676255/1‑140 (MQ=255)           cgcCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCtt                                                                                                                          >  2:148128/1‑140 (MQ=255)           cgcCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCtt                                                                                                                          >  2:1297094/1‑140 (MQ=255)           cgcCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCtt                                                                                                                          >  1:310188/1‑140 (MQ=255)           cgcCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCtt                                                                                                                          <  2:423950/140‑1 (MQ=255)            gcCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCttt                                                                                                                         >  2:796190/1‑140 (MQ=255)              cGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTc                                                                                                                       >  2:474189/1‑140 (MQ=255)              cGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTc                                                                                                                       >  1:843998/1‑140 (MQ=255)              cGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTc                                                                                                                       >  1:1225481/1‑140 (MQ=255)                     tgctACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTca                                                                                                                <  2:407057/140‑1 (MQ=255)                     tgctACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTca                                                                                                                <  2:1225481/140‑1 (MQ=255)                     tgctACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTAATCCAGTCGGTAAGCCTGCTTTTCATCTTca                                                                                                                <  2:934483/140‑1 (MQ=255)                          cGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGc                                                                                                           >  2:989403/1‑140 (MQ=255)                           gCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCg                                                                                                          <  2:1239216/140‑1 (MQ=255)                            cTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGa                                                                                                         <  2:829588/140‑1 (MQ=255)                               ttGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGa                                                                                                      >  1:765330/1‑140 (MQ=255)                                tGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAg                                                                                                     <  2:1391498/140‑1 (MQ=255)                                tGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAg                                                                                                     <  2:189188/140‑1 (MQ=255)                                tGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAg                                                                                                     <  1:1211512/140‑1 (MQ=255)                                 gCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGc                                                                                                    >  1:568445/1‑140 (MQ=255)                                 gCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGc                                                                                                    <  2:598557/140‑1 (MQ=255)                                 gCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGc                                                                                                    <  1:143249/140‑1 (MQ=255)                                 gCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGc                                                                                                    <  1:443915/140‑1 (MQ=255)                                  cGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCa                                                                                                   <  1:920675/140‑1 (MQ=255)                                     ccAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCAcgc                                                                                                <  2:46354/140‑1 (MQ=255)                                             tctcCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCg                                                                                        <  2:381202/140‑1 (MQ=255)                                              ctcCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGc                                                                                       <  1:386318/140‑1 (MQ=255)                                              ctcCACCGGTACACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGc                                                                                       <  1:966680/140‑1 (MQ=255)                                                 cACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTgc                                                                                    >  1:837744/1‑140 (MQ=255)                                                       tGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAAc                                                                              >  2:1082052/1‑140 (MQ=255)                                                       tGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAAc                                                                              >  1:95684/1‑140 (MQ=255)                                                         cACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGt                                                                            >  1:855662/1‑140 (MQ=255)                                                         cACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGt                                                                            >  2:180070/1‑140 (MQ=255)                                                         cACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGt                                                                            >  2:390459/1‑140 (MQ=255)                                                         cACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGt                                                                            >  1:1296566/1‑140 (MQ=255)                                                                 cgcgGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTc                                                                          <  2:230366/134‑1 (MQ=255)                                                                 cgcgGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTc                                                                          >  1:230366/1‑134 (MQ=255)                                                                 cgcgGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGc                                                                    >  1:1222929/1‑140 (MQ=255)                                                                   cgGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAGCGTTCTGCGGCaa                                                                  <  2:608913/140‑1 (MQ=255)                                                                      tCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAAttt                                                               <  2:219194/140‑1 (MQ=255)                                                                          tctcCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTcaca                                                           <  1:557166/140‑1 (MQ=255)                                                                           ctcCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTcacac                                                          >  1:14939/1‑140 (MQ=255)                                                                           ctcCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTcacac                                                          <  1:1015036/140‑1 (MQ=255)                                                                            tcCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTcacaca                                                         >  1:236724/1‑140 (MQ=255)                                                                                gCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAg                                                     >  1:641362/1‑140 (MQ=255)                                                                                gCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAg                                                     >  2:449920/1‑140 (MQ=255)                                                                                gCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAg                                                     >  1:604327/1‑140 (MQ=255)                                                                                gCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAg                                                     >  1:742770/1‑140 (MQ=255)                                                                                gCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAg                                                     >  2:35717/1‑140 (MQ=255)                                                                                gCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAg                                                     >  2:1011440/1‑140 (MQ=255)                                                                                gCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCACCAATTTCACACACCAg                                                     >  1:832684/1‑140 (MQ=255)                                                                                  tAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGtt                                                   >  2:1291448/1‑140 (MQ=255)                                                                                        aTGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCaa                                             >  2:1057102/1‑140 (MQ=255)                                                                                          gCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACg                                           <  1:714669/140‑1 (MQ=255)                                                                                          gCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACg                                           <  1:1011440/140‑1 (MQ=255)                                                                                          gCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACg                                           <  1:1252323/140‑1 (MQ=255)                                                                                          gCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACg                                           <  1:492663/140‑1 (MQ=255)                                                                                           cGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATTTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTcaca                                                           >  2:271771/1‑123 (MQ=255)                                                                                           cGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATTTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTcaca                                                           <  1:271771/123‑1 (MQ=255)                                                                                                cAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCtt                                     <  1:1071607/140‑1 (MQ=255)                                                                                                   aGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAg                                  <  2:837744/140‑1 (MQ=255)                                                                                                   aGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAg                                  <  1:180070/140‑1 (MQ=255)                                                                                                       ttCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAGCCAt                              <  1:989403/140‑1 (MQ=255)                                                                                                        tCTGCCGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAGCCATc                             >  1:1174478/1‑140 (MQ=255)                                                                                                            ccGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAGCCATCGACg                         >  1:595120/1‑140 (MQ=255)                                                                                                             cGGACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAGCCATCGACgg                        <  2:14939/140‑1 (MQ=255)                                                                                                               gACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAGCCATCGACggtg                      >  1:1352511/1‑140 (MQ=255)                                                                                                               gACGCGCCCACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAGCCATCGACggtg                      >  2:1077485/1‑140 (MQ=255)                                                                                                                     cccACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAGCCATCGACGGTGGTGTCa                <  1:1110379/140‑1 (MQ=255)                                                                                                                      ccACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAGCCATCAACGGTGGTGTCa                >  1:394996/1‑139 (MQ=255)                                                                                                                      ccACAGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAGCCATCAACGGTGGTGTCa                <  2:394996/139‑1 (MQ=255)                                                                                                                         caGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAGCCATCGACGGTGGTGTCATTGt            <  1:578767/140‑1 (MQ=255)                                                                                                                          aGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAGCCATCGACGGTGGTGTCATTGTc           <  2:742770/140‑1 (MQ=255)                                                                                                                          aGGGCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAGCCATCGACGGTGGTGTCATTGTc           <  2:843998/140‑1 (MQ=255)                                                                                                                           gggCTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAGCCATCGACGGTGGTGTCATTGTcc          >  2:632089/1‑140 (MQ=255)                                                                                                                              cTTCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCTATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAGCCATCGACGGTGGTGTCATTGTCCAGa       >  2:1376318/1‑140 (MQ=255)                                                                                                                                tCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAGCCATCGACGGTGGTGTCAtt              <  2:683635/131‑1 (MQ=255)                                                                                                                                tCATCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAGCCATCGACGGTGGTGTCAtt              >  1:683635/1‑131 (MQ=255)                                                                                                                                   tCCAGTCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAGCCATCGACGGTGGTGTCATTGTCCAGAAGGTa  <  2:592212/140‑1 (MQ=255)                                                                                                                                        |                                                                                                                                       CAATATATCGCGCCGGCTGCTGCTACGCTTTTGCGGCCAGGCGATCTCCACCGGTGCACCGCCGCGCGGTCCTTCTCCCGCTAAATTATGCGGAACAAAGCTTTCTGCCGGACGCGCCCACAGGGCTTCATCCAGCCGGTAAGCCTGCTTTTCATCTTCACAGGCGATGAGCACGCGCTTACCGCTGCGCCAACGTTCTGCGGCAATTTCACACACCAGTTGCTCAACGGCGCTTAAGCCATCGACGGTGGTGTCATTGTCCAGAAGGTA  >  NC_000913/4483993‑4484262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑