Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 155,284 A→G I48T (ATT→ACT)  htrE ← putative fimbrial usher protein HtrE

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913155,2840AG100.0% 431.3 / NA 122I48T (ATT→ACT) htrEputative fimbrial usher protein HtrE
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (66/56);  total (66/56)

Only 100 of 128 total aligned reads displayed.

AGCCTGGGCGTTCTTTTTTCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAATATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAGATGATGATAATTTTTAGTATATTCTA  >  NC_000913/155148‑155419
                                                                                                                                        |                                                                                                                                       
aGCCTGGGCGTTCTTTTTTCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAgtat                                                                                                                                      <  2:1392653/140‑1 (MQ=255)
aGCCTGGGCGTTCTTTTTTCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAgtat                                                                                                                                      <  1:1179331/140‑1 (MQ=255)
   cTGGGCGTTCTTTTTTCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAg                                                                                                                                   >  1:19025/1‑140 (MQ=255)
     gggCGTTCTTTTTTCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTGGAt                                                                                                                                 >  1:22631/1‑140 (MQ=255)
     gggCGTTCTTTTTTCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGAt                                                                                                                                 >  2:448605/1‑140 (MQ=255)
     gggCGTTCTTTTTTCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGAt                                                                                                                                 <  1:314527/140‑1 (MQ=255)
      ggCGTTCTTTTTTCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCGGTATTAGATg                                                                                                                                >  2:1246390/1‑140 (MQ=255)
      ggCGTTCTTTTTTCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAgtat                                                                                                                                      <  2:1055481/134‑1 (MQ=255)
      ggCGTTCTTTTTTCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAgtat                                                                                                                                      >  1:1055481/1‑134 (MQ=255)
      ggCGTTCTTTTTTCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATg                                                                                                                                >  2:145511/1‑140 (MQ=255)
      ggCGTTCTTTTTTCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATg                                                                                                                                >  1:1238805/1‑140 (MQ=255)
      ggCGTTCTTTTTTCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATg                                                                                                                                >  2:678577/1‑140 (MQ=255)
      ggCGTTCTTTTTTCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATg                                                                                                                                >  2:1144659/1‑140 (MQ=255)
      ggCGTTCTTTTTTCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATg                                                                                                                                >  2:528876/1‑140 (MQ=255)
           tCTTTTTTCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTc                                                                                                                           >  1:1262252/1‑140 (MQ=255)
           tCTTTTTTCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTc                                                                                                                           >  2:557306/1‑140 (MQ=255)
            cTTTTTTCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCt                                                                                                                          >  2:800526/1‑140 (MQ=255)
             ttttttCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTg                                                                                                                         <  1:10123/140‑1 (MQ=255)
             ttttttCCTTCAATTGCGACAAATGTAATACTCTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTg                                                                                                                         <  2:383961/140‑1 (MQ=255)
               ttttCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGcc                                                                                                                       <  1:557306/140‑1 (MQ=255)
                   ccTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCAt                                                                                                                   <  1:528876/140‑1 (MQ=255)
                   ccTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCAt                                                                                                                   <  2:1284976/140‑1 (MQ=255)
                      tCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAg                                                                                                                <  1:956776/140‑1 (MQ=255)
                      tCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAg                                                                                                                <  1:1218694/140‑1 (MQ=255)
                       cAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAgg                                                                                                               <  2:947529/140‑1 (MQ=255)
                       cAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAgg                                                                                                               <  2:153154/140‑1 (MQ=255)
                            gCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGt                                                                                                          <  1:678577/140‑1 (MQ=255)
                            gCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGt                                                                                                          <  2:22449/140‑1 (MQ=255)
                             cGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTa                                                                                                         <  2:745089/140‑1 (MQ=255)
                                           cTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAAc                                                                                           <  1:474220/140‑1 (MQ=255)
                                            tttGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACg                                                                                          >  1:393685/1‑140 (MQ=255)
                                              tGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAg                                                                                        >  2:1245831/1‑140 (MQ=255)
                                              tGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAg                                                                                        >  1:242242/1‑140 (MQ=255)
                                              tGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAg                                                                                        >  2:144117/1‑140 (MQ=255)
                                              tGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAg                                                                                        >  1:402769/1‑140 (MQ=255)
                                              tGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAg                                                                                        >  2:378722/1‑140 (MQ=255)
                                              tGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAg                                                                                        >  2:1152622/1‑140 (MQ=255)
                                              tGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAg                                                                                        >  1:730481/1‑140 (MQ=255)
                                              tGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCAGATTCAACGAg                                                                                        >  2:868961/1‑140 (MQ=255)
                                                gTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGtt                                                                                      <  1:92974/140‑1 (MQ=255)
                                                gTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGtt                                                                                      >  2:101789/1‑140 (MQ=255)
                                                gTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGtt                                                                                      >  1:1221657/1‑140 (MQ=255)
                                                  tAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCa                                                                                    <  1:281152/140‑1 (MQ=255)
                                                   aaTGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAg                                                                                   >  2:1026223/1‑140 (MQ=255)
                                                       aTTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACt                                                                               <  1:101789/140‑1 (MQ=255)
                                                          ggttggtCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGaa                                                                            >  1:74996/1‑140 (MQ=255)
                                                          ggttggtCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGaa                                                                            >  2:6356/1‑140 (MQ=255)
                                                          ggttggtCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGaa                                                                            >  2:676263/1‑140 (MQ=255)
                                                          ggttggtCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGaa                                                                            <  1:1245831/140‑1 (MQ=255)
                                                           gttggtCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCa                                                                                    <  2:974088/131‑1 (MQ=255)
                                                           gttggtCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGaaa                                                                           >  1:212301/1‑140 (MQ=255)
                                                           gttggtCGTTTACATAAACACTGACGTCGTAAACACCCGATATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGaaa                                                                           >  2:1215597/1‑140 (MQ=255)
                                                              ggtCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCa                                                                        >  1:952555/1‑140 (MQ=255)
                                                              ggtCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCa                                                                        >  2:348361/1‑140 (MQ=255)
                                                               gtCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCGGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAg                                                                       <  1:1246390/140‑1 (MQ=255)
                                                               gtCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAg                                                                       >  2:391340/1‑140 (MQ=255)
                                                               gtCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAg                                                                       >  2:332746/1‑140 (MQ=255)
                                                                tCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGt                                                                      <  2:230234/140‑1 (MQ=255)
                                                                tCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGt                                                                      >  2:1302488/1‑140 (MQ=255)
                                                                 cGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTa                                                                     >  1:973589/1‑140 (MQ=255)
                                                                  gTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTAt                                                                    >  1:99143/1‑140 (MQ=255)
                                                                    ttACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTg                                                                  <  1:145511/140‑1 (MQ=255)
                                                                    ttACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTg                                                                  <  1:676263/140‑1 (MQ=255)
                                                                    ttACATAAACACTGACGTCATAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTAAAAGCAGTATTg                                                                  <  2:393370/140‑1 (MQ=255)
                                                                             cacTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATAcagc                                                         >  2:1341453/1‑140 (MQ=255)
                                                                                 gACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAgcg                                                     >  1:138379/1‑140 (MQ=255)
                                                                                 gACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAgcg                                                     >  1:1353130/1‑140 (MQ=255)
                                                                                  aCGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAgcgc                                                    >  1:161918/1‑140 (MQ=255)
                                                                                     tcgtAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCa                                                 <  2:706313/140‑1 (MQ=255)
                                                                                        tAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCaaaa                                              >  2:827843/1‑140 (MQ=255)
                                                                                        tAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCaaaa                                              <  1:448605/140‑1 (MQ=255)
                                                                                                 ggTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGAt                                     <  1:1152622/140‑1 (MQ=255)
                                                                                                  gTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATa                                    <  1:697221/140‑1 (MQ=255)
                                                                                                  gTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATa                                    <  2:952555/140‑1 (MQ=255)
                                                                                                     taGCGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACgg                                 <  1:378722/140‑1 (MQ=255)
                                                                                                        cGGGGTTGCCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTc                              >  2:432522/1‑140 (MQ=255)
                                                                                                        cGGGGTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTc                              >  1:90950/1‑140 (MQ=255)
                                                                                                          gggTTACCTTCACTGTACCGGCTGAGATCAGTATTGGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAg                            <  2:22631/140‑1 (MQ=255)
                                                                                                            gTTACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAgat                          >  2:919541/1‑140 (MQ=255)
                                                                                                             ttACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAgatg                         >  2:1338474/1‑140 (MQ=255)
                                                                                                             ttACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAgatg                         >  2:588145/1‑140 (MQ=255)
                                                                                                             ttACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAgatg                         >  2:1243260/1‑140 (MQ=255)
                                                                                                             ttACCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATC‑GGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGt                               <  1:359518/133‑1 (MQ=255)
                                                                                                               aCCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGt                               >  1:326892/1‑132 (MQ=255)
                                                                                                               aCCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGt                               <  2:326892/132‑1 (MQ=255)
                                                                                                               aCCTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAgatgat                       >  1:1118625/1‑140 (MQ=255)
                                                                                                                ccTTCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAgatgatg                      >  1:1170559/1‑140 (MQ=255)
                                                                                                                  ttCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAgatgatgat                    <  1:588145/140‑1 (MQ=255)
                                                                                                                  ttCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAgatgatgat                    <  2:1221657/140‑1 (MQ=255)
                                                                                                                   tCACTGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAGATGATGATa                   <  2:525671/140‑1 (MQ=255)
                                                                                                                       tGTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAGATGATGATAAttt               <  1:1215597/140‑1 (MQ=255)
                                                                                                                        gTACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAGATGATGATAAtttt              <  2:730481/140‑1 (MQ=255)
                                                                                                                         tACCGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAGATGATGATAAttttt             <  2:402769/140‑1 (MQ=255)
                                                                                                                            cGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAGATGATGATAATTTTTAGt          <  1:1338474/140‑1 (MQ=255)
                                                                                                                            cGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAGATGATGATAATTTTTAGt          >  1:118008/1‑140 (MQ=255)
                                                                                                                            cGGCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAGATGATGATAATTTTTAGt          <  1:800526/140‑1 (MQ=255)
                                                                                                                             ggCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAGATGATGATAATTTTTAGta         <  1:6356/140‑1 (MQ=255)
                                                                                                                              gCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAGATGATGATAATTTTTAGtat        >  2:422316/1‑140 (MQ=255)
                                                                                                                              gCTGAGATCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAGATGATGATAATTTTTAGtat        <  1:919541/140‑1 (MQ=255)
                                                                                                                                   gaTCAGTATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAGATGATGATAATTTTTAGTATATTCt   >  1:651437/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                       
AGCCTGGGCGTTCTTTTTTCCTTCAATTGCGACAAATGTAATACTTTGGTTAATGATTGGTTGGTCGTTTACATAAACACTGACGTCGTAAACACCCGGTATAGCGGGGTTACCTTCACTGTACCGGCTGAGATCAATATTAGATGCATTCTGCCCCATCAGGAAGGTATGGTCATATTCAACGAGTTCAGCACTGAAAGCAGTATTGCAATACAGCAGCGCGCAAAACGTGGCGATACGGGTCAGATGATGATAATTTTTAGTATATTCTA  >  NC_000913/155148‑155419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑