Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,185,872	A→G	N10S (AAC→AGC)	pepT →	peptidase T

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,185,872	0	A	G	100.0%	329.3 / NA	92	N10S (AAC→AGC)	pepT	peptidase T
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (43/49);  total (43/49)

GGTAATGCTGATAAATATTCCCGCTTGCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAACTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAATGTGACCTTAAG  >  NC_000913/1185737‑1186001                                                                                                                                        |                                                                                                                                  ggTAATGCTGATAAATATTCCCGCTTGCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTAc                                                                                                                               <  1:363873/140‑1 (MQ=255)  gTAATGCTGATAAATATTCCCGCTTGCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACg                                                                                                                              <  2:1142405/140‑1 (MQ=255)     aTGCTGATAAATATTCCCGCTTGCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACgtgt                                                                                                                           <  1:116069/140‑1 (MQ=255)     aTGCTGATAAATATTCCCGCTTGCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACgtgt                                                                                                                           <  2:147792/140‑1 (MQ=255)      tGCTGATAAATATTCCCGCTTGCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGtc                                                                                                                          >  1:386197/1‑140 (MQ=255)      tGCTGATAAATATTCCCGCTTGCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGtc                                                                                                                          <  1:1267569/140‑1 (MQ=255)        cTGATAAATATTCCCGCTTGCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGtctc                                                                                                                        >  1:1078892/1‑140 (MQ=255)          gATAAATATTCCCGCTTGCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTg                                                                                                                      <  2:503711/140‑1 (MQ=255)           aTAAATATTCCCGCTTGCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGATGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTgg                                                                                                                     >  1:71696/1‑140 (MQ=255)           aTAAATATTCCCGCTTGCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTgg                                                                                                                     >  1:173083/1‑140 (MQ=255)            tAAATATTCCCGCTTGCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGtc                                                                                                                          <  2:1293181/134‑1 (MQ=255)            tAAATATTCCCGCTTGCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGtc                                                                                                                          >  1:1293181/1‑134 (MQ=255)                   tCCCGCTTGCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCaa                                                                                                             >  1:671276/1‑140 (MQ=255)                     ccGCTTGCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAATTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATc                                                                                                           >  2:1309880/1‑140 (MQ=255)                          tGCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAg                                                                                                      >  1:937183/1‑140 (MQ=255)                          tGCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAg                                                                                                      >  2:1301294/1‑140 (MQ=255)                           gCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGc                                                                                                     <  1:126758/140‑1 (MQ=255)                           gCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGc                                                                                                     <  2:717719/140‑1 (MQ=255)                            cAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATAcc                                                                                                                >  2:248397/1‑128 (MQ=255)                            cAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATAcc                                                                                                                <  1:248397/128‑1 (MQ=255)                            cAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCa                                                                                                    >  2:809481/1‑140 (MQ=255)                              ggggTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAgg                                                                                                  <  2:329035/140‑1 (MQ=255)                              ggggTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAgg                                                                                                  <  1:462063/140‑1 (MQ=255)                                 gTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGt                                                                                               <  2:671276/140‑1 (MQ=255)                                  tAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTg                                                                                              <  1:87853/140‑1 (MQ=255)                                  tAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTg                                                                                              >  1:1288593/1‑140 (MQ=255)                                    aaaGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTgag                                                                                            >  2:1102795/1‑140 (MQ=255)                                     aaGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTgaga                                                                                           >  2:1321649/1‑140 (MQ=255)                                           ccTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTga                                                                                             >  2:244061/1‑132 (MQ=255)                                           ccTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTga                                                                                             <  1:244061/132‑1 (MQ=255)                                           ccTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGtt                                                                                     >  2:368932/1‑140 (MQ=255)                                           ccTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGtt                                                                                     >  2:315212/1‑140 (MQ=255)                                              gACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTccc                                                                                  <  1:1102795/140‑1 (MQ=255)                                               aCGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCa                                                                                 >  2:698833/1‑140 (MQ=255)                                               aCGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCa                                                                                 >  2:441875/1‑140 (MQ=255)                                                cGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAg                                                                                >  2:951782/1‑140 (MQ=255)                                                     tatTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACgg                                                                           <  2:937183/140‑1 (MQ=255)                                                      atTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGa                                                                          <  1:1301294/140‑1 (MQ=255)                                                        ttGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAg                                                                        <  1:146108/140‑1 (MQ=255)                                                         tGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATTGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAgg                                                                       >  1:707235/1‑140 (MQ=255)                                                          gTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGc                                                                      <  2:555203/140‑1 (MQ=255)                                                          gTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGc                                                                      <  1:809481/140‑1 (MQ=255)                                                             tcttCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCaa                                                                   >  1:670298/3‑140 (MQ=255)                                                               ttCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATg                                                                 >  2:426387/1‑140 (MQ=255)                                                               ttCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATg                                                                 >  2:94841/1‑140 (MQ=255)                                                               ttCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATg                                                                 >  1:975293/1‑140 (MQ=255)                                                                tCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATgg                                                                <  1:368932/140‑1 (MQ=255)                                                                  ttGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGaa                                                              <  1:1321649/140‑1 (MQ=255)                                                                            ataatGTTGTCACAAAAAGTGAGGGTGACTACATTGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCAt                                                    <  2:707235/140‑1 (MQ=255)                                                                            ataatGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCAt                                                    <  2:1078892/140‑1 (MQ=255)                                                                                   tgtCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGa                                             >  2:1245072/1‑140 (MQ=255)                                                                                   tgtCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGa                                             >  1:38778/1‑140 (MQ=255)                                                                                     tCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGaaa                                           >  2:1015089/1‑140 (MQ=255)                                                                                     tCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGaaa                                           >  1:57682/1‑140 (MQ=255)                                                                                     tCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGaaa                                           >  2:212830/1‑140 (MQ=255)                                                                                     tCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGa                                             <  2:936078/138‑1 (MQ=255)                                                                                     tCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGa                                             >  1:936078/1‑138 (MQ=255)                                                                                         aaaaaGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGagc                                       >  1:287766/1‑140 (MQ=255)                                                                                               tGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCg                                 >  2:285299/1‑140 (MQ=255)                                                                                                gAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGa                                <  1:698833/140‑1 (MQ=255)                                                                                                 aGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGaa                               <  2:386197/140‑1 (MQ=255)                                                                                                       aCTACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATg                         >  2:783012/1‑140 (MQ=255)                                                                                                         tACATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATggg                       <  1:285299/140‑1 (MQ=255)                                                                                                          aCATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATgggg                      <  1:1245072/140‑1 (MQ=255)                                                                                                           cATGGATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGc                     <  1:1015089/140‑1 (MQ=255)                                                                                                               gATAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTAt                 >  2:1390724/1‑140 (MQ=255)                                                                                                                aTAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTAt                 >  1:1100351/1‑139 (MQ=255)                                                                                                                aTAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTAt                 <  2:1100351/139‑1 (MQ=255)                                                                                                                 tAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCa               <  1:446953/140‑1 (MQ=255)                                                                                                                 tAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCa               >  2:634236/1‑140 (MQ=255)                                                                                                                 tAAACTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCa               >  1:1197664/1‑140 (MQ=255)                                                                                                                   aaCTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCCCGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAAt             <  1:1233242/140‑1 (MQ=255)                                                                                                                   aaCTACTTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAAt             <  1:1110643/140‑1 (MQ=255)                                                                                                                    actactTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGTCCAATGGAAGTTATTGCATCTGCTGAATGAGCAGCTCGAAGAGATGGGGCTTATCAAtg            <  2:975293/140‑1 (MQ=255)                                                                                                                    actactTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAAtg            <  1:426387/140‑1 (MQ=255)                                                                                                                     ctactTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAAtgt           <  2:1224774/140‑1 (MQ=255)                                                                                                                        ctTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAATGTGAc        <  1:212830/140‑1 (MQ=255)                                                                                                                        ctTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAATGTGAc        <  1:783012/140‑1 (MQ=255)                                                                                                                        ctTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAATGTGAc        <  1:1309880/140‑1 (MQ=255)                                                                                                                        ctTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAATGTGAc        <  1:315212/140‑1 (MQ=255)                                                                                                                        ctTGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAATGTGAc        <  1:146586/140‑1 (MQ=255)                                                                                                                         ttGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATggg                       <  2:1116321/124‑1 (MQ=255)                                                                                                                         ttGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATggg                       >  1:1116321/1‑124 (MQ=255)                                                                                                                         ttGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAATGTGAcc       <  1:634236/140‑1 (MQ=255)                                                                                                                          tGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATggg                       <  2:651211/123‑1 (MQ=255)                                                                                                                          tGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATggg                       >  1:651211/1‑123 (MQ=255)                                                                                                                          tGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAATGTGACCt      >  2:21310/1‑140 (MQ=255)                                                                                                                          tGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAATGTGACCt      <  1:441875/140‑1 (MQ=255)                                                                                                                          tGAGCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAATGTGACCt      <  1:94841/140‑1 (MQ=255)                                                                                                                             gCGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAATGTGACCTTaa   <  1:1338270/140‑1 (MQ=255)                                                                                                                              cGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAATGTGACCTTAAg  >  1:485445/1‑140 (MQ=255)                                                                                                                              cGATTTTTGAGCTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAATGTGACCTTAAg  >  1:605352/1‑140 (MQ=255)                                                                                                                                        |                                                                                                                                  GGTAATGCTGATAAATATTCCCGCTTGCAGGGGTAAAAGTGACCTGACGCAATATTTGTCTTTTCTTGCTTCTTAATAATGTTGTCACAAAAAGTGAGGGTGACTACATGGATAAACTACTTGAGCGATTTTTGAACTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAATGTGACCTTAAG  >  NC_000913/1185737‑1186001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑