BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,034,608	T→C	pseudogene (558/1193 nt)	yedS →	putative outer membrane protein YedS, N‑terminal fragment

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,034,608	0	T	C	100.0%	405.0 / NA	114	pseudogene (558/1193 nt)	yedS	putative outer membrane protein YedS, N‑terminal fragment
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (61/53); total (61/53)

Only 100 of 115 total aligned reads displayed.

GACAACTTCATGAACGGTCGTGCTAATGGTGTTGCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGTTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAAACTCTGATCGTTCAGATCGTCAGGTTG  >  NC_000913/2034471‑2034743

gACAACTTCATGAACGGTCGTGCTAATGGTGTTGCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTc                                                                                                                                       >  1:753409/1‑140 (MQ=255)

     cTTCATGAACGGTCGTGCTAATGGTGTTGCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTa                                                                                                                                  <  2:512061/140‑1 (MQ=255)

           gAACGGTCGTGCTAATGGTGTTGCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAgtggtg                                                                                                                            >  2:1217603/1‑140 (MQ=255)

            aaCGGTCGTGCTAATGGTGTTGCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGa                                                                                                                           <  1:312809/140‑1 (MQ=255)

            aaCGGTCGTGCTAATGGTGTTGCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGa                                                                                                                           <  2:515414/140‑1 (MQ=255)

            aaCGGTCGTGCTAATGGTGTTGCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGa                                                                                                                           <  1:917444/140‑1 (MQ=255)

                gTCGTGCTAATGGTGTTGCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGc                                                                                                                       >  1:1162890/1‑140 (MQ=255)

                gTCGTGCTAATGGTGTTGCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGc                                                                                                                       >  2:134831/1‑140 (MQ=255)

                gTCGTGCTAATGGTGTTGCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGc                                                                                                                       >  2:1056871/1‑140 (MQ=255)

                           ggTGTTGCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGa                                                                                                                           <  1:1196676/125‑1 (MQ=255)

                           ggTGTTGCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGa                                                                                                                           >  2:1196676/1‑125 (MQ=255)

                           ggTGTTGCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTc                                                                                                            >  2:928086/1‑140 (MQ=255)

                           ggTGTTGCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTc                                                                                                            >  2:458697/1‑140 (MQ=255)

                              gtTGCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCaa                                                                                                         >  2:254810/1‑140 (MQ=255)

                              gtTGCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCaa                                                                                                         >  2:489650/1‑140 (MQ=255)

                                 gCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGa                                                                                                      >  1:607840/1‑140 (MQ=255)

                                        aCCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGt                                                                                               <  1:277819/140‑1 (MQ=255)

                                         ccGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTg                                                                                              <  2:1350734/140‑1 (MQ=255)

                                         ccGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTg                                                                                              >  1:1141009/1‑140 (MQ=255)

                                            tAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATg                                                                                           >  2:945657/1‑140 (MQ=255)

                                               cAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGtt                                                                                        >  2:1158909/1‑140 (MQ=255)

                                                 aTGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTc                                                                                      <  1:1158909/140‑1 (MQ=255)

                                                   ggCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCgg                                                                                    <  2:714692/140‑1 (MQ=255)

                                                   ggCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCgg                                                                                    >  1:1002454/1‑140 (MQ=255)

                                                   ggCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCgg                                                                                    <  2:284685/140‑1 (MQ=255)

                                                   ggCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGCGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCgg                                                                                    >  2:38021/1‑140 (MQ=255)

                                                    gCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGt                                                                                   <  2:630662/140‑1 (MQ=255)

                                                    gCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGt                                                                                   >  2:1100158/1‑140 (MQ=255)

                                                    gCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGt                                                                                   <  1:835020/140‑1 (MQ=255)

                                                    gCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGt                                                                                   >  2:662804/1‑140 (MQ=255)

                                                     cttcttTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTa                                                                                  <  1:282825/140‑1 (MQ=255)

                                                     cttcttTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTa                                                                                  <  1:134831/140‑1 (MQ=255)

                                                     cttcttTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTa                                                                                  <  2:753409/140‑1 (MQ=255)

                                                        cttTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGt                                                                               >  1:168092/1‑140 (MQ=255)

                                                         tttGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTc                                                                              <  1:489650/140‑1 (MQ=255)

                                                              ttAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACAt                                                                         >  2:1106979/1‑140 (MQ=255)

                                                                  gTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTa                                                                     >  1:989904/1‑140 (MQ=255)

                                                                  gTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTa                                                                     <  1:928086/140‑1 (MQ=255)

                                                                   tCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTAc                                                                    <  1:1106979/140‑1 (MQ=255)

                                                                   tCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTAc                                                                    >  2:218135/1‑140 (MQ=255)

                                                                       tGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTAcgact                                                                >  1:515149/1‑140 (MQ=255)

                                                                       tGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTAcgact                                                                >  2:965160/1‑140 (MQ=255)

                                                                       tGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTAcgact                                                                >  1:343547/1‑140 (MQ=255)

                                                                       tGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTAcgact                                                                >  1:199663/1‑140 (MQ=255)

                                                                          cTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTAcgacttcg                                                             >  1:1301474/1‑140 (MQ=255)

                                                                            tGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTAcgacttcgac                                                           <  2:762207/140‑1 (MQ=255)

                                                                            tGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTAcgacttcgac                                                           >  1:762207/1‑140 (MQ=255)

                                                                              aaCTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTAcgacttcgactt                                                         <  2:1162890/140‑1 (MQ=255)

                                                                              aaCTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTAcgacttcgactt                                                         <  1:458697/140‑1 (MQ=255)

                                                                                   tgctttgcAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCggct                                                    >  1:519109/1‑138 (MQ=255)

                                                                                   tgctttgcAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGtt                                                    >  1:971817/1‑140 (MQ=255)

                                                                                   tgctttgcAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGtt                                                    <  1:916690/140‑1 (MQ=255)

                                                                                   tgctttgcAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGtt                                                    >  1:691009/1‑140 (MQ=255)

                                                                                   tgctttgcAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGtt                                                    >  2:499197/1‑140 (MQ=255)

                                                                                     ctttgcAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTa                                                  <  2:164780/140‑1 (MQ=255)

                                                                                     ctttgcAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTa                                                  >  2:389983/1‑140 (MQ=255)

                                                                                            atatCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTgg                                           <  1:389983/140‑1 (MQ=255)

                                                                                             tatCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTggg                                          <  2:515149/140‑1 (MQ=255)

                                                                                               tCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGtg                                        <  2:1174576/140‑1 (MQ=255)

                                                                                               tCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGtg                                        <  1:1289502/140‑1 (MQ=255)

                                                                                                 aGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGtgct                                      <  2:1141009/140‑1 (MQ=255)

                                                                                                  gggTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGtgctg                                     >  2:20226/1‑140 (MQ=255)

                                                                                                  gggTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGtgctg                                     >  2:476962/1‑140 (MQ=255)

                                                                                                  gggTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGtgctg                                     >  1:79643/1‑140 (MQ=255)

                                                                                                  gggTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGtgctg                                     >  2:1115613/1‑140 (MQ=255)

                                                                                                   ggTAATAATGAAAGTGGTGGACCATTCGGGCAGGACGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGtgctgc                                    <  2:971817/140‑1 (MQ=255)

                                                                                                   ggTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGtgctgc                                    <  2:611269/140‑1 (MQ=255)

                                                                                                   ggTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGtgctgc                                    <  1:810412/140‑1 (MQ=255)

                                                                                                   ggTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGtgctgc                                    >  1:443466/1‑140 (MQ=255)

                                                                                                    gTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCa                                   >  2:901849/1‑140 (MQ=255)

                                                                                                    gTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCa                                   >  1:1014976/1‑140 (MQ=255)

                                                                                                       ataatGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCatat                                >  2:507794/1‑140 (MQ=255)

                                                                                                       ataatGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCatat                                <  2:607840/140‑1 (MQ=255)

                                                                                                       ataatGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCatat                                <  2:989904/140‑1 (MQ=255)

                                                                                                       ataatGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCatat                                <  2:256713/140‑1 (MQ=255)

                                                                                                       ataatGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCatat                                >  1:1381209/1‑140 (MQ=255)

                                                                                                        taatGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATAGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATc                               >  1:1390363/1‑140 (MQ=255)

                                                                                                         aatGAAAGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCa                              <  2:595982/140‑1 (MQ=255)

                                                                                                             aaaGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTggg                                          <  1:1029730/124‑1 (MQ=255)

                                                                                                             aaaGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAAAct                          >  2:187806/1‑140 (MQ=255)

                                                                                                             aaaGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAAAct                          >  2:1084802/1‑140 (MQ=255)

                                                                                                             aaaGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAAAct                          >  2:1082555/1‑140 (MQ=255)

                                                                                                              aaGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAAActc                         <  2:343547/140‑1 (MQ=255)

                                                                                                               aGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCaaa                            >  2:1337029/1‑136 (MQ=255)

                                                                                                               aGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAGActct                        <  2:443466/140‑1 (MQ=255)

                                                                                                               aGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAAActct                        <  2:79467/140‑1 (MQ=255)

                                                                                                               aGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAAActct                        <  2:79643/140‑1 (MQ=255)

                                                                                                               aGTGGTGGACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAAActct                        >  1:213452/1‑140 (MQ=255)

                                                                                                                 tggtggACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAAACTCTGa                      <  1:945657/140‑1 (MQ=255)

                                                                                                                   gtggACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCATCATCCTACGACTTCGACTTCGGTTTAAGTCTGGGtgctgc                                    <  1:431213/124‑1 (MQ=255)

                                                                                                                   gtggACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAAACTCTGATc                    >  1:276953/1‑140 (MQ=255)

                                                                                                                    tggACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAAACTCTGATCg                   >  1:1243561/1‑140 (MQ=255)

                                                                                                                      gACCATTCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAAACTCTGATCGtt                 >  1:1034744/1‑140 (MQ=255)

                                                                                                                           ttCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAAACTCTGATCGTTCAGAt            >  1:900948/1‑140 (MQ=255)

                                                                                                                           ttCGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAAACTCTGATCGTTCAGAt            <  1:1056871/140‑1 (MQ=255)

                                                                                                                             cGGGCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAAACTCTGATCGTTCAGATCg          >  1:222379/1‑140 (MQ=255)

                                                                                                                              gggCAGGAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAAACTCTGATCGTTCAGATCGt         <  1:1064728/140‑1 (MQ=255)

                                                                                                                                   ggAAGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAAACTCTGATCGTTCAGATCGTCAGGt    <  2:1303260/140‑1 (MQ=255)

                                                                                                                                     aaGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAAACTCTGATCGTTCAGATCGTCAGGTTg  >  2:1048428/1‑140 (MQ=255)

                                                                                                                                     aaGGCTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTACATATCAAACTCTGATCGTTCAGATCGTCAGGTTg  >  2:930479/1‑140 (MQ=255)

GACAACTTCATGAACGGTCGTGCTAATGGTGTTGCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGTTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATCAAACTCTGATCGTTCAGATCGTCAGGTTG  >  NC_000913/2034471‑2034743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`