Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,764,173 T→C E327E (GAA→GAG)  abpA ← CP4‑57 prophage; anti‑bacteriophage protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,764,1730TC100.0% 334.3 / NA 94E327E (GAA→GAG) abpACP4‑57 prophage; anti‑bacteriophage protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (35/59);  total (35/59)

CCCCTGCTTTTTCCACGTATAGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGTTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTATTTCTTAAGTGAGTACTGCT  >  NC_000913/2764037‑2764303
                                                                                                                                         |                                                                                                                                  
ccccTGCTTTTTCCACGTATAGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGctct                                                                                                                                 <  2:229595/140‑1 (MQ=255)
ccccTGCTTTTTCCACGTATAGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGctct                                                                                                                                 <  1:201106/140‑1 (MQ=255)
ccccTGCTTTTTCCACGTATAGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTAAGTCGctct                                                                                                                                 <  1:501756/140‑1 (MQ=255)
  ccTGCTTTTTCCACGTATAGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCg                                                                                                                               <  2:39292/140‑1 (MQ=255)
    tGCTTTTTCCACGTATAGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCt                                                                                                                             <  1:1290389/140‑1 (MQ=255)
        ttttCCACGTATAGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCt                                                                                                                             >  2:913425/1‑136 (MQ=255)
        ttttCCACGTATAGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCt                                                                                                                             <  1:913425/136‑1 (MQ=255)
         tttCCACGTATAGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCa                                                                                                                        <  2:1028799/140‑1 (MQ=255)
             cACGTATAGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCaatga                                                                                                                    <  2:1279561/140‑1 (MQ=255)
              aCGTATAGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCaatgaa                                                                                                                   >  2:668607/1‑140 (MQ=255)
              aCGTATAGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCaat                                                                                                                      <  1:1280412/137‑1 (MQ=255)
              aCGTATAGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCaat                                                                                                                      >  2:1280412/1‑137 (MQ=255)
                gTATAGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCaatgaatg                                                                                                                 >  2:1313483/1‑140 (MQ=255)
                 tataGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGt                                                                                                                <  2:336139/140‑1 (MQ=255)
                 tataGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGt                                                                                                                <  2:975934/140‑1 (MQ=255)
                  ataGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTc                                                                                                               <  1:1313483/140‑1 (MQ=255)
                  ataGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTc                                                                                                               <  2:1167293/140‑1 (MQ=255)
                   taGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTCGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCa                                                                                                              >  2:1019540/1‑140 (MQ=255)
                    aGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAg                                                                                                             <  2:598798/140‑1 (MQ=255)
                    aGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAg                                                                                                             <  2:879168/140‑1 (MQ=255)
                    aGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAg                                                                                                             >  2:1203405/1‑140 (MQ=255)
                    aGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTC‑ATGAATGTCAGt                                                                                                            <  2:1080730/140‑1 (MQ=255)
                        tGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTa                                                                                                         >  2:625279/1‑140 (MQ=255)
                          cAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATg                                                                                                       >  1:169750/1‑140 (MQ=255)
                           aaGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGt                                                                                                                >  2:679972/1‑130 (MQ=255)
                           aaGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGt                                                                                                                <  1:679972/130‑1 (MQ=255)
                           aaGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGa                                                                                                      >  2:675195/1‑140 (MQ=255)
                           aaGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGa                                                                                                      >  1:182738/1‑140 (MQ=255)
                           aaGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCCGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGa                                                                                                      >  1:84002/1‑140 (MQ=255)
                                aTAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATc                                                                                                 >  1:709208/1‑140 (MQ=255)
                                 tAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCa                                                                                                <  1:1198536/140‑1 (MQ=255)
                                     ctggctTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACa                                                                                            >  2:357906/1‑140 (MQ=255)
                                       ggctTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACAtt                                                                                          >  1:987907/1‑140 (MQ=255)
                                         ctTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGAc                                                                                             >  2:48451/1‑135 (MQ=255)
                                         ctTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGAc                                                                                             <  1:48451/135‑1 (MQ=255)
                                         ctTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTc                                                                                        >  1:1085408/1‑140 (MQ=255)
                                         ctTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTc                                                                                        >  2:828490/1‑140 (MQ=255)
                                         ctTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTc                                                                                        >  2:434235/1‑140 (MQ=255)
                                         ctTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTc                                                                                        >  1:1039025/1‑140 (MQ=255)
                                           ttCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCtt                                                                                      <  2:1163193/140‑1 (MQ=255)
                                                ggtgCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGt                                                                                 <  2:1166215/140‑1 (MQ=255)
                                                  tgctgcCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCg                                                                               <  1:279940/140‑1 (MQ=255)
                                                  tgctgcCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCg                                                                               >  2:397393/1‑140 (MQ=255)
                                                    ctgcCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGga                                                                             >  1:1026042/1‑140 (MQ=255)
                                                    ctgcCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGga                                                                             >  1:359961/1‑140 (MQ=255)
                                                           aTCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAAc                                                                      <  1:489782/140‑1 (MQ=255)
                                                           aTCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAAc                                                                      <  1:658286/140‑1 (MQ=255)
                                                           aTCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAAc                                                                      <  1:1203405/140‑1 (MQ=255)
                                                            tCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAAcc                                                                     >  2:979422/1‑140 (MQ=255)
                                                                 gCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATc                                                                <  2:182738/140‑1 (MQ=255)
                                                                 gCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATc                                                                <  2:1002864/140‑1 (MQ=255)
                                                                   gTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCa                                                              <  1:1207650/140‑1 (MQ=255)
                                                                     gCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAAc                                                            <  2:359961/140‑1 (MQ=255)
                                                                           gCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTCGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGa                                                      <  1:1019540/140‑1 (MQ=255)
                                                                            cACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGAc                                                     <  2:668394/140‑1 (MQ=255)
                                                                             aCTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACa                                                    <  1:731057/140‑1 (MQ=255)
                                                                                 gACCCAAAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGAc                                                 >  1:535468/1‑140 (MQ=255)
                                                                                 gACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACg                                                >  2:346113/1‑140 (MQ=255)
                                                                                 gACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACg                                                >  1:1106558/1‑140 (MQ=255)
                                                                                       aaaaaTTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATc                                           <  1:57271/140‑1 (MQ=255)
                                                                                           aTTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCcgcg                                       <  1:891317/140‑1 (MQ=255)
                                                                                           aTTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTCTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCcgcg                                       <  1:640036/140‑1 (MQ=255)
                                                                                            ttCGCTGACGTCATGGAGCGATTTGAAGACGGAGTTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCCTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGa                                      <  1:637065/140‑1 (MQ=255)
                                                                                            ttCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGa                                      <  1:828490/140‑1 (MQ=255)
                                                                                             tCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGAt                                     <  1:672361/140‑1 (MQ=255)
                                                                                               gCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGAtgt                                   >  2:1243939/1‑140 (MQ=255)
                                                                                                     gTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGt                             <  1:548652/140‑1 (MQ=255)
                                                                                                       cATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAg                           <  2:709208/140‑1 (MQ=255)
                                                                                                       cATGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAg                           <  2:1063678/140‑1 (MQ=255)
                                                                                                        aTGGAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGc                          >  2:1347824/1‑140 (MQ=255)
                                                                                                          ggAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCgg                        <  2:535468/140‑1 (MQ=255)
                                                                                                          ggAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCgg                        <  2:528907/140‑1 (MQ=255)
                                                                                                          ggAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCgg                        <  2:990597/140‑1 (MQ=255)
                                                                                                          ggAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCgg                        <  2:394873/140‑1 (MQ=255)
                                                                                                          ggAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCgg                        <  2:1039025/140‑1 (MQ=255)
                                                                                                          ggAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCgg                        <  2:1085408/140‑1 (MQ=255)
                                                                                                           gAGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGt                       >  1:302840/1‑140 (MQ=255)
                                                                                                            aGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTa                      <  2:1093530/140‑1 (MQ=255)
                                                                                                            aGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTa                      <  2:84002/140‑1 (MQ=255)
                                                                                                            aGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTa                      <  2:778828/140‑1 (MQ=255)
                                                                                                            aGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTa                      <  1:675195/140‑1 (MQ=255)
                                                                                                            aGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTa                      <  2:1239678/140‑1 (MQ=255)
                                                                                                            aGCGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTa                      <  2:97905/140‑1 (MQ=255)
                                                                                                              cGATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTAtt                    >  2:191370/1‑140 (MQ=255)
                                                                                                               gATTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTAttt                   >  2:329196/1‑140 (MQ=255)
                                                                                                                aTTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTATTTc                  >  2:942682/1‑140 (MQ=255)
                                                                                                                aTTTGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCAT‑CAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTATTTCt                 <  2:1335747/140‑1 (MQ=255)
                                                                                                                 tttGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTATTTCt                 <  1:901532/140‑1 (MQ=255)
                                                                                                                 tttGAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTATTTCt                 <  2:987907/140‑1 (MQ=255)
                                                                                                                    gAAGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTATTTCTTaa              <  2:468922/140‑1 (MQ=255)
                                                                                                                      aGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTATTTCTTAAGt            >  2:419428/1‑140 (MQ=255)
                                                                                                                      aGACGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTATTTCTTAAGt            >  2:1361796/1‑140 (MQ=255)
                                                                                                                         cGGAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTATTTCTTAAGTGAg         <  1:668607/140‑1 (MQ=255)
                                                                                                                          ggAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTa                      <  1:215452/126‑1 (MQ=255)
                                                                                                                          ggAATTCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTa                      >  2:215452/1‑126 (MQ=255)
                                                                                                                              ttCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTATTTCTTAAGTGAGTActg    <  1:625279/140‑1 (MQ=255)
                                                                                                                               tCTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTATTTCTTAAGTGAGTActgc   <  1:357906/140‑1 (MQ=255)
                                                                                                                                cTTTAGTCGCTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTATTTCTTAAGTGAGTActgct  <  1:1347824/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                  
CCCCTGCTTTTTCCACGTATAGCATGCAAGGAATAGGCTGGCTTTCGTGGTGCTGCCGGATCGTTGCGTGCAACAGCACTCGACCC‑AAAAATTCGCTGACGTCATGGAGCGATTTGAAGACGGAATTCTTTAGTCGTTCTCGCTTTTCAATGAATGTCAGTTTATGAATATCAGACATTTCTTTTGGTCGGAGAAAAACCTCATCCAACCATTGACAGACGTTATCCGCGATGTGCTTGTAGCGGTATTTCTTAAGTGAGTACTGCT  >  NC_000913/2764037‑2764303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑