BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,854,315	C→T	intergenic (+51/‑23)	hypE → / → fhlA	hydrogenase maturation protein, carbamoyl dehydratase/DNA‑binding transcriptional activator FhlA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,854,315	0	C	T	100.0%	364.0 / NA	101	intergenic (+51/‑23)	hypE/fhlA	hydrogenase maturation protein, carbamoyl dehydratase/DNA‑binding transcriptional activator FhlA
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (49/52); total (49/52)

Only 100 of 106 total aligned reads displayed.

GTAAAGGTGTTCGTCTTGCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGCGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTG  >  NC_000913/2854179‑2854448

gTAAAGGTGTTCGTCTTGCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGACAATGACCTTTTGCACCGCTTTGTGGt                                                                                                                                    >  2:164771/1‑140 (MQ=255)

 tAAAGGTGTTCGTCTTGCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTgtggtg                                                                                                                                   >  2:1147878/1‑140 (MQ=255)

 tAAAGGTGTTCGTCTTGCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTgtggtg                                                                                                                                   >  2:723881/1‑140 (MQ=255)

 tAAAGGTGTTCGTCTTGCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTgtggtg                                                                                                                                   <  1:837680/140‑1 (MQ=255)

   aaGGTGTTCGTCTTGCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGGACCGCTTTGTGGTGCt                                                                                                                                 >  2:1264952/1‑140 (MQ=255)

   aaGGTGTTCGTCTTGCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCt                                                                                                                                 >  2:946904/1‑140 (MQ=255)

   aaGGTGTTCGTCTTGCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCt                                                                                                                                 >  2:153897/1‑140 (MQ=255)

   aaGGTGTTCGTCTTGCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCt                                                                                                                                 >  1:1250640/1‑140 (MQ=255)

         ttCGTCTTGCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTg                                                                                                                           >  2:949896/1‑140 (MQ=255)

         ttCGTCTTGCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTg                                                                                                                           >  2:1384497/1‑140 (MQ=255)

          tCGTCTTGCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTgg                                                                                                                          >  1:683424/1‑140 (MQ=255)

           cGTCTTGCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGga                                                                                                                         >  2:1195633/1‑140 (MQ=255)

           cGTCTTGCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGga                                                                                                                         <  1:37586/140‑1 (MQ=255)

              cTTGCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGgaaga                                                                                                                      <  2:1279012/140‑1 (MQ=255)

              cTTGCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGgaaga                                                                                                                      <  2:514885/140‑1 (MQ=255)

                 gCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACa                                                                                                                   <  1:1195633/140‑1 (MQ=255)

                 gCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACa                                                                                                                   <  2:386070/140‑1 (MQ=255)

                   cGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACaaa                                                                                                                 <  1:597206/140‑1 (MQ=255)

                     gTCTGTATGTCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAAt                                                                                                               <  1:909874/140‑1 (MQ=255)

                        tGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTc                                                                                                            <  1:153897/140‑1 (MQ=255)

                        tGTATGGCATCGACCGATCCCTCGCTCTGCCCCACGCCGAACCGCTTCCGCGTCTATGCTCATACAATTCTCGAGCTCCTCTAGCTAGTCAATGCACTTTTGCCCCGCTTTGCGGTGCTTTCCTGGAAGAACAAAATGTc                                                                                                            <  2:351301/140‑1 (MQ=255)

                          tATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCat                                                                                                          <  2:683424/140‑1 (MQ=255)

                            tGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCatat                                                                                                        <  2:686495/140‑1 (MQ=255)

                            tGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCatat                                                                                                        <  1:573927/140‑1 (MQ=255)

                               cGTGAAACGAACCCTCGATTTATCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATaca                                                                                                     >  1:549263/1‑140 (MQ=255)

                               cGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATaca                                                                                                     <  1:420030/140‑1 (MQ=255)

                               cGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATaca                                                                                                     <  2:1228746/140‑1 (MQ=255)

                               cGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATaca                                                                                                     >  1:346624/1‑140 (MQ=255)

                                gTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAAt                                                                                                               >  2:678690/1‑129 (MQ=255)

                                gTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAAt                                                                                                               <  1:678690/129‑1 (MQ=255)

                                  gAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATGTGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCg                                                                                                  <  1:1366806/140‑1 (MQ=255)

                                  gAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCg                                                                                                  >  2:224387/1‑140 (MQ=255)

                                       gAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATTTACACCGATGAg                                                                                             <  2:1158316/140‑1 (MQ=255)

                                       gAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAg                                                                                             <  1:889664/140‑1 (MQ=255)

                                             tCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGAtct                                                                                       >  1:1349117/1‑140 (MQ=255)

                                             tCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGT‑AATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGAtctc                                                                                      <  1:381839/140‑1 (MQ=255)

                                               gATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCg                                                                                     <  2:1349117/140‑1 (MQ=255)

                                               gATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCg                                                                                     >  2:1243379/1‑140 (MQ=255)

                                               gATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCg                                                                                     >  2:914130/1‑140 (MQ=255)

                                                aTTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCgg                                                                                    <  2:549263/140‑1 (MQ=255)

                                                          cGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAggg                                                                          <  2:677853/140‑1 (MQ=255)

                                                           gCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCgg                                                                                    >  2:1367913/1‑129 (MQ=255)

                                                           gCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCgg                                                                                    <  1:1367913/129‑1 (MQ=255)

                                                           gCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGacaaca                                                                              <  2:1140029/135‑1 (MQ=255)

                                                           gCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGacaaca                                                                              >  1:1140029/1‑135 (MQ=255)

                                                           gCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAg                                                                            <  2:251141/137‑1 (MQ=255)

                                                           gCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAg                                                                            >  1:251141/1‑137 (MQ=255)

                                                               aaCCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGgttgtt                                                                     >  2:637354/1‑140 (MQ=255)

                                                                   gCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGAc                                                                 <  2:1403241/140‑1 (MQ=255)

                                                                   gCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGAc                                                                 <  2:1043584/140‑1 (MQ=255)

                                                                   gCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGAc                                                                 <  1:957978/140‑1 (MQ=255)

                                                                     ttCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACAt                                                               >  2:1071009/1‑140 (MQ=255)

                                                                     ttCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACAt                                                               <  2:360960/140‑1 (MQ=255)

                                                                         gcgTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACt                                                           <  1:224387/140‑1 (MQ=255)

                                                                         gcgTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACt                                                           <  1:538532/140‑1 (MQ=255)

                                                                           gTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCg                                                         <  1:949896/140‑1 (MQ=255)

                                                                             atatGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGa                                                       <  1:910865/140‑1 (MQ=255)

                                                                             atatGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGa                                                       <  1:1264952/140‑1 (MQ=255)

                                                                             atatGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGa                                                       <  1:1050077/140‑1 (MQ=255)

                                                                              tatGCTAATAAAATTCTAAATCTCCTATAGTTAGACAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGac                                                      <  1:164771/140‑1 (MQ=255)

                                                                                     ataaAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTg                                               >  1:1328835/1‑140 (MQ=255)

                                                                                     ataaAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTg                                               >  1:519714/1‑140 (MQ=255)

                                                                                      taaAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGa                                                       <  1:280131/131‑1 (MQ=255)

                                                                                      taaAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGa                                                       >  2:280131/1‑131 (MQ=255)

                                                                                      taaAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTgc                                              >  2:507988/1‑140 (MQ=255)

                                                                                            tCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACGAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCagcagc                                        >  2:963607/1‑140 (MQ=255)

                                                                                             cTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGcc                                       <  1:1147878/140‑1 (MQ=255)

                                                                                               aaaTCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCg                                     >  1:991547/1‑140 (MQ=255)

                                                                                                  tctcCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATc                                  <  1:723881/140‑1 (MQ=255)

                                                                                                     ccTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATc                                  <  1:1227808/137‑1 (MQ=255)

                                                                                                     ccTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATc                                  >  2:1227808/1‑137 (MQ=255)

                                                                                                      cTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGc                              <  2:94610/140‑1 (MQ=255)

                                                                                                      cTATAGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGc                              >  2:704561/1‑140 (MQ=255)

                                                                                                       tataGTTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGcc                             <  1:637354/140‑1 (MQ=255)

                                                                                                       tataGCTAGTCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACAACACTCGGACACTATTGCAGCAGCCCGATCTGGcc                             <  2:1250640/140‑1 (MQ=255)

                                                                                                          agttagtCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCg                          <  2:283694/140‑1 (MQ=255)

                                                                                                            ttagtCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCt                        >  2:378659/1‑140 (MQ=255)

                                                                                                             tagtCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCtg                       >  1:833465/1‑140 (MQ=255)

                                                                                                              agtCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCg                          >  1:605090/1‑136 (MQ=255)

                                                                                                              agtCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCg                          <  2:605090/136‑1 (MQ=255)

                                                                                                              agtCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCtgt                      >  2:135637/1‑140 (MQ=255)

                                                                                                              agtCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCtgt                      >  1:6494/1‑140 (MQ=255)

                                                                                                              agtCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCtgt                      >  2:380532/1‑140 (MQ=255)

                                                                                                              agtCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCtgt                      >  2:371474/1‑140 (MQ=255)

                                                                                                              agtCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCtgt                      >  1:51809/1‑140 (MQ=255)

                                                                                                              agtCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCtgt                      >  1:472606/1‑140 (MQ=255)

                                                                                                               gtCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCtgtg                     >  2:1005959/1‑140 (MQ=255)

                                                                                                                tCAATGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCtgtgt                    >  2:207837/1‑140 (MQ=255)

                                                                                                                   aTGACCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCTGTGTGAg                 >  2:537382/1‑140 (MQ=255)

                                                                                                                      aCCTTTTGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGct              >  1:982222/1‑140 (MQ=255)

                                                                                                                          tttGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCg                          <  2:66172/124‑1 (MQ=255)

                                                                                                                          tttGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCttt          >  2:670573/1‑140 (MQ=255)

                                                                                                                          tttGCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCttt          >  2:951918/1‑140 (MQ=255)

                                                                                                                             gCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGc       <  2:1197441/140‑1 (MQ=255)

                                                                                                                             gCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGc       <  1:975986/140‑1 (MQ=255)

                                                                                                                             gCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGc       <  2:1328835/140‑1 (MQ=255)

                                                                                                                             gCACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGc       <  1:207837/140‑1 (MQ=255)

                                                                                                                              cACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCa      <  1:507988/140‑1 (MQ=255)

                                                                                                                              cACCGCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCa      <  1:380532/140‑1 (MQ=255)

                                                                                                                                  gCTTTGTGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTg  >  1:568755/1‑140 (MQ=255)

GTAAAGGTGTTCGTCTTGCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAATAAAATTCTAAATCTCCTATAGTTAGTCAATGACCTTTTGCACCGCTTTGCGGTGCTTTCCTGGAAGAACAAAATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTG  >  NC_000913/2854179‑2854448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`