Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,897,560	C→T	P19S (CCG→TCG)	cbrB →	putative inner membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,897,560	0	C	T	100.0%	307.1 / NA	85	P19S (CCG→TCG)	cbrB	putative inner membrane protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (45/40);  total (45/40)

TTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGAGCTATTCCTGCGTTGTTAAC  >  NC_000913/3897429‑3897690                                                                                                                                    |                                                                                                                                   ttACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAAtt                                                                                                                            >  2:424298/1‑140 (MQ=255)   aCGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTgg                                                                                                                          >  2:235296/1‑140 (MQ=255)      gCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGgtgt                                                                                                                       <  2:1127276/140‑1 (MQ=255)       cATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGtt                                                                                                                      >  2:937088/1‑140 (MQ=255)       cATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGtt                                                                                                                      >  2:736293/1‑140 (MQ=255)            ttcttcACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGtt                                                                                                                 >  1:1128831/1‑140 (MQ=255)            ttcttcACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGtt                                                                                                                 >  2:269527/1‑140 (MQ=255)              cttcACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTc                                                                                                               <  1:424298/140‑1 (MQ=255)              cttcACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTc                                                                                                               <  2:687030/140‑1 (MQ=255)                 cacaCTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTg                                                                                                            <  1:369846/140‑1 (MQ=255)                  acacTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGt                                                                                                           <  1:640121/140‑1 (MQ=255)                   cacTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTc                                                                                                          <  2:678666/140‑1 (MQ=255)                    acTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTcc                                                                                                         <  2:610411/140‑1 (MQ=255)                    acTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTcc                                                                                                         <  2:883307/140‑1 (MQ=255)                    acTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTcc                                                                                                         <  1:457266/140‑1 (MQ=255)                    acTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTcc                                                                                                         <  2:147223/140‑1 (MQ=255)                    acTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTcc                                                                                                         >  1:532523/1‑140 (MQ=255)                      tCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCctc                                                                                                       >  1:1200876/1‑140 (MQ=255)                      tCCCTGCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCt                                                                                                                    <  2:570983/127‑1 (MQ=255)                      tCCCTGCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCt                                                                                                                    >  1:570983/1‑127 (MQ=255)                       cccTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCctct                                                                                                      <  2:1200876/140‑1 (MQ=255)                        ccTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTa                                                                                                     >  2:999294/1‑140 (MQ=255)                         cTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTcc                                                                                                         <  1:253956/135‑1 (MQ=255)                         cTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTcc                                                                                                         >  2:253956/1‑135 (MQ=255)                         cTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTAc                                                                                                    >  1:915696/1‑140 (MQ=255)                                tACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATAttct                                                                                             >  1:299678/1‑140 (MQ=255)                                tACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATAttct                                                                                             >  1:196861/1‑140 (MQ=255)                                 aCCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATAttctt                                                                                            >  1:1055968/1‑140 (MQ=255)                                  ccccGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCtt                                                                                                             <  1:48486/122‑1 (MQ=255)                                  ccccGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCtt                                                                                                             >  2:48486/1‑122 (MQ=255)                                  ccccGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATAttcttc                                                                                           >  2:662605/1‑140 (MQ=255)                                  ccccGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATAttcttc                                                                                           >  2:466337/1‑140 (MQ=255)                                  ccccGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATAttcttc                                                                                           >  1:144071/1‑140 (MQ=255)                                       cTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCaaa                                                                                      >  2:499899/1‑140 (MQ=255)                                        ttAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCaaaa                                                                                     >  1:1162545/1‑140 (MQ=255)                                         tAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAg                                                                                    <  2:522076/140‑1 (MQ=255)                                             ttGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAAcc                                                                                >  2:157391/1‑140 (MQ=255)                                                gcgcTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCt                                                                             <  1:662605/140‑1 (MQ=255)                                                 cgcTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTg                                                                            <  2:1055968/140‑1 (MQ=255)                                                       aaGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCtt                                                                      <  2:356415/140‑1 (MQ=255)                                                       aaGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCtt                                                                      <  1:736293/140‑1 (MQ=255)                                                        aGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCttt                                                                     <  2:915696/140‑1 (MQ=255)                                                         ggTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTg                                                                    <  2:299678/140‑1 (MQ=255)                                                           taagtaaAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTggg                                                                  <  1:645358/140‑1 (MQ=255)                                                             agtaaAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTg                                                                >  2:244116/1‑140 (MQ=255)                                                                  aGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTg                                                                    >  2:1036461/1‑131 (MQ=255)                                                                  aGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTg                                                                    <  1:1036461/131‑1 (MQ=255)                                                                    ggAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCt                                                                       >  2:607974/1‑126 (MQ=255)                                                                    ggAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCt                                                                       <  1:607974/126‑1 (MQ=255)                                                                       gTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATc                                                      >  2:1056202/1‑140 (MQ=255)                                                                       gTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATc                                                      >  1:483739/1‑140 (MQ=255)                                                                         ttGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCa                                                    >  1:98308/1‑140 (MQ=255)                                                                         ttGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCa                                                    >  2:838175/1‑140 (MQ=255)                                                                               tGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAAttttt                                              >  2:258638/1‑140 (MQ=255)                                                                                gTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACAGCTGGTTCTTTGGGTGATAATACATCCAATTTTtc                                             >  2:830657/1‑140 (MQ=255)                                                                                     tttCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTa                                        >  2:586670/1‑140 (MQ=255)                                                                                       tCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTAtt                                      >  1:229783/1‑140 (MQ=255)                                                                                         aCGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGt                                    >  1:2629/1‑140 (MQ=255)                                                                                          cGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTc                                   >  1:332759/1‑140 (MQ=255)                                                                                           gTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCg                                  >  1:756116/1‑140 (MQ=255)                                                                                           gTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCg                                  >  1:1345/1‑140 (MQ=255)                                                                                           gTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTCGGGTGATAATACATCCAATTTTTCTCTTATTGTCg                                  >  1:922862/1‑140 (MQ=255)                                                                                               ggTAATACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATaa                              >  1:152921/1‑140 (MQ=255)                                                                                                  aaTACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTa                           <  2:332759/140‑1 (MQ=255)                                                                                                    tACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACg                         <  1:586670/140‑1 (MQ=255)                                                                                                    tACATCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACg                         <  2:196861/140‑1 (MQ=255)                                                                                                       aTCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGa                      >  2:980171/1‑140 (MQ=255)                                                                                                       aTCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGa                      >  2:1198577/1‑140 (MQ=255)                                                                                                        tCACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGAg                     <  2:653861/140‑1 (MQ=255)                                                                                                         cACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATa                               <  2:444812/129‑1 (MQ=255)                                                                                                         cACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATa                               >  1:444812/1‑129 (MQ=255)                                                                                                         cACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACg                         >  2:1074415/1‑135 (MQ=255)                                                                                                         cACGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACg                         <  1:1074415/135‑1 (MQ=255)                                                                                                           cGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGAg                     <  1:1138592/137‑1 (MQ=255)                                                                                                           cGGACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGAg                     >  2:1138592/1‑137 (MQ=255)                                                                                                            ggACTTTATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGAGCTAt                 <  1:235296/140‑1 (MQ=255)                                                                                                                tttATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGAGCTATTCCt             >  1:1176817/1‑140 (MQ=255)                                                                                                                 ttATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGAGCTATTCCTg            <  1:999294/140‑1 (MQ=255)                                                                                                                 ttATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGAGCTATTCCTg            >  1:941341/1‑140 (MQ=255)                                                                                                                 ttATTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGAGCTATTCCTg            <  1:658366/140‑1 (MQ=255)                                                                                                                   aTTTTGCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGAGCTATTCCTGCg          <  2:1176817/140‑1 (MQ=255)                                                                                                                        gCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGAGCTATTCCTGCgttgtt     <  1:1198577/140‑1 (MQ=255)                                                                                                                        gCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGAGCTATTCCTGCgttgtt     <  1:499899/140‑1 (MQ=255)                                                                                                                        gCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGAGCTATTCCTGCgttgtt     <  1:1056202/140‑1 (MQ=255)                                                                                                                        gCAGTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGAGCTATTCCTGCgttgtt     <  2:22768/140‑1 (MQ=255)                                                                                                                           gTTTTAGGATCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGAGCTATTCCTGCGTTGTTAAc  <  2:941341/140‑1 (MQ=255)                                                                                                                                    |                                                                                                                                   TTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGAGCTATTCCTGCGTTGTTAAC  >  NC_000913/3897429‑3897690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑