Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	35,374	T→C	intergenic (‑3/+3)	caiE ← / ← caiD	putative transferase CaiE/crotonobetainyl‑CoA hydratase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	35,374	0	T	C	100.0%	283.0 / NA	75	intergenic (‑3/+3)	caiE/caiD	putative transferase CaiE/crotonobetainyl‑CoA hydratase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (36/39);  total (36/39)

CCACGCAGTGAGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAGCGATACGCTTCTTCTAC  >  NC_000913/35238‑35508                                                                                                                                         |                                                                                                                                       ccacGCAGTGAGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGgctgt                                                                                                                                     >  1:359344/1‑140 (MQ=255) ccacGCAGTGAGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGATCACGgctgt                                                                                                                                     >  2:1041714/1‑140 (MQ=255)  cacGCAGTGAGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGgctgtt                                                                                                                                    >  1:101402/1‑140 (MQ=255)   acGCAGTGAGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTa                                                                                                                                   <  2:1108110/140‑1 (MQ=255)    cGCAGTGAGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTaa                                                                                                                                  >  1:397599/1‑140 (MQ=255)       aGTGAGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGt                                                                                                                               <  2:857585/140‑1 (MQ=255)       aGTGAGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGt                                                                                                                               <  2:291578/140‑1 (MQ=255)            ggCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCttt                                                                                                                          >  1:555286/1‑140 (MQ=255)             gCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTc                                                                                                                         <  1:1041714/140‑1 (MQ=255)                 gTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCcaca                                                                                                                     <  2:397599/140‑1 (MQ=255)                         aTGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATcg                                                                                                             <  1:556256/140‑1 (MQ=255)                          tGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCcaca                                                                                                                     <  2:1183410/131‑1 (MQ=255)                          tGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCcaca                                                                                                                     >  1:1183410/1‑131 (MQ=255)                                cacCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTtct                                                                                                      >  1:67477/1‑140 (MQ=255)                                  ccGGCTCCCACAATCACATCCCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCg                                                                                                    >  2:1138340/1‑140 (MQ=255)                                   ccgCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCgg                                                                                                   >  2:371183/3‑140 (MQ=255)                                   cGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCgg                                                                                                   >  1:27182/1‑140 (MQ=255)                                   cGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCgg                                                                                                   >  2:1081584/1‑140 (MQ=255)                                   cGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCgg                                                                                                   >  1:633329/1‑140 (MQ=255)                                   cGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCgg                                                                                                   >  2:1009507/1‑140 (MQ=255)                                     gCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCa                                                                                                 >  1:8470/1‑140 (MQ=255)                                     gCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCa                                                                                                 <  1:1009507/140‑1 (MQ=255)                                     gCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCa                                                                                                 <  1:371183/140‑1 (MQ=255)                                     gCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCa                                                                                                 >  2:429335/1‑140 (MQ=255)                                      cTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCaa                                                                                                >  2:512471/1‑140 (MQ=255)                                        cccACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAAc                                                                                              >  1:497315/1‑140 (MQ=255)                                              aTCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGc                                                                                        <  2:67477/140‑1 (MQ=255)                                               tCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCg                                                                                       <  1:722146/140‑1 (MQ=255)                                                cacaTCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCgg                                                                                      <  2:555286/140‑1 (MQ=255)                                                   aTCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGccc                                                                                   <  2:269131/140‑1 (MQ=255)                                                   aTCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGccc                                                                                   <  1:829568/140‑1 (MQ=255)                                                    tCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCt                                                                                  >  2:535537/1‑140 (MQ=255)                                                           tCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATgg                                                                           >  1:101406/1‑140 (MQ=255)                                                                aCGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCAt                                                                        >  1:370470/1‑138 (MQ=255)                                                                aCGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCAt                                                                        <  2:370470/138‑1 (MQ=255)                                                                       tGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAAt                                                               >  2:52411/1‑140 (MQ=255)                                                                        gggATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATg                                                              <  2:629371/140‑1 (MQ=255)                                                                        gggATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATg                                                              <  1:996061/140‑1 (MQ=255)                                                                         ggATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGc                                                             >  1:860307/1‑140 (MQ=255)                                                                         ggATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGc                                                             >  1:163746/1‑140 (MQ=255)                                                                           aTGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAg                                                           <  2:939404/140‑1 (MQ=255)                                                                           aTGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAg                                                           <  1:627733/140‑1 (MQ=255)                                                                             ggACAAACGCCGTCGGGTGAACCACCCGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGaa                                                         <  1:842829/140‑1 (MQ=255)                                                                              gACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAAc                                                        >  1:362942/1‑140 (MQ=255)                                                                              gACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTC‑AAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAAcc                                                       >  2:806531/1‑140 (MQ=255)                                                                                cAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCg                                                      <  2:27182/140‑1 (MQ=255)                                                                                   aCGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTcc                                                                   <  1:1191818/124‑1 (MQ=255)                                                                                   aCGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTcc                                                                   >  2:1191818/1‑124 (MQ=255)                                                                                   aCGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAg                                                           >  1:1119572/1‑132 (MQ=255)                                                                                   aCGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAg                                                           <  2:1119572/132‑1 (MQ=255)                                                                                     gCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGa                                                 <  1:32343/140‑1 (MQ=255)                                                                                     gCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGa                                                 <  2:359344/140‑1 (MQ=255)                                                                                      ccGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGAt                                                <  2:362942/140‑1 (MQ=255)                                                                                       cGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATa                                               <  1:381928/140‑1 (MQ=255)                                                                                        gTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGAt                                                <  1:640889/138‑1 (MQ=255)                                                                                        gTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGAt                                                >  2:640889/1‑138 (MQ=255)                                                                                        gTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAg                                              >  2:580647/1‑140 (MQ=255)                                                                                        gTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAg                                              >  1:275762/1‑140 (MQ=255)                                                                                        gTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAg                                              >  1:1025724/1‑140 (MQ=255)                                                                                         tCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAgt                                             >  2:927131/1‑140 (MQ=255)                                                                                                   caccGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAacac                                   >  1:1083687/1‑140 (MQ=255)                                                                                                   caccGGAATTAACCCCTC‑AAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACAcg                                  <  1:806531/140‑1 (MQ=255)                                                                                                    accGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACAcg                                  <  2:1083687/140‑1 (MQ=255)                                                                                                    accGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACAcg                                  <  1:580647/140‑1 (MQ=255)                                                                                                       ggAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACAcgc                                 <  2:1177788/138‑1 (MQ=255)                                                                                                       ggAATTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACAcgc                                 >  1:1177788/1‑138 (MQ=255)                                                                                                         aaTTAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCt                             <  2:633329/140‑1 (MQ=255)                                                                                                           ttAACCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGc                           <  2:48637/140‑1 (MQ=255)                                                                                                              aCCCCTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGaa                        <  1:224288/140‑1 (MQ=255)                                                                                                                cccTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAaca                                    <  1:294264/126‑1 (MQ=255)                                                                                                                cccTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAaca                                    >  2:294264/1‑126 (MQ=255)                                                                                                                cccTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAata                      <  2:558932/140‑1 (MQ=255)                                                                                                                cccTCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAata                      >  1:558932/1‑140 (MQ=255)                                                                                                                   tCAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAg                   >  2:859033/1‑140 (MQ=255)                                                                                                                    cAAAGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAGc                  >  1:326031/1‑140 (MQ=255)                                                                                                                     aaaGGCGTAATAGCTCACGGCTGTTACCGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAGCg                 <  2:842100/140‑1 (MQ=255)                                                                                                                      aaGGCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAGCGa                <  1:859033/140‑1 (MQ=255)                                                                                                                        ggCGTAATAGCTCACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAGCGATa              <  2:860307/140‑1 (MQ=255)                                                                                                                                    cACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGGATATAGCGATACGCTTCTTCTAc  >  1:447348/1‑140 (MQ=255)                                                                                                                                    cACGGCTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAGCGATACGCTTCTTCTAc  >  1:204477/1‑140 (MQ=255)                                                                                                                                         |                                                                                                                                       CCACGCAGTGAGGCGAGTGGGCCGATGTAGACACCGGCTCCCACAATCACATCGCCAATCAAGACGGCACTGGGATGGACAAACGCCGTCGGGTGAACCACCGGAATTAACCCCTCAAAGGCGTAATAGCTCACGGTTGTTAACGTCCTTTCCACACCGGATCGCGCTTCTCGGCAAACGCCAGCGGCCCTTCAATGGCATCTTCCGAATGCAGAACCGATGGATAGTGTTTCAACACGCCGCTGCGAATATAGCGATACGCTTCTTCTAC  >  NC_000913/35238‑35508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑