Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,219,636	A→G	pseudogene (36/2648 nt)	ycgH →	putative transporter component, N‑terminal fragment

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,219,636	0	A	G	100.0%	300.6 / NA	79	pseudogene (36/2648 nt)	ycgH	putative transporter component, N‑terminal fragment
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (33/46);  total (33/46)

TTTGTCTTTACCCTCCGTTTTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGACTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGATAATAATCCGATAAGTAATGGAGAGTATCTA  >  NC_000913/1219513‑1219771                                                                                                                            |                                                                                                                                        tttgtCTTTACCCTCCGTTTTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCgg                                                                                                                         <  1:1132745/140‑1 (MQ=255)  ttgtCTTTACCCTCCGTTTTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGt                                                                                                                        <  2:1038888/140‑1 (MQ=255)  ttgtCTTTACCCTCCGTTTTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGt                                                                                                                        <  1:87565/140‑1 (MQ=255)  ttgtCTTTACCCTCCGTTCTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGt                                                                                                                        <  1:656642/140‑1 (MQ=255)      cTTTACCCTCCGTTTTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGt                                                                                                                    <  1:1151360/140‑1 (MQ=255)      cTTTACCCTCCGTTTTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGt                                                                                                                    <  2:607670/140‑1 (MQ=255)      cTTTACCCTCCGTTTTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGt                                                                                                                    <  2:425880/140‑1 (MQ=255)           cccTCCGTTTTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGc                                                                                                               <  2:83368/140‑1 (MQ=255)           cccTCCGTTTTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGc                                                                                                               <  1:805579/140‑1 (MQ=255)           cccTCCGTTTTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGc                                                                                                               <  1:214180/140‑1 (MQ=255)               ccGTTTTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCatat                                                                                                           >  2:272362/1‑140 (MQ=255)               ccGTTTTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCatat                                                                                                           >  1:81568/1‑140 (MQ=255)               ccGTTTTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCatat                                                                                                           >  1:381964/1‑140 (MQ=255)               ccGTTTTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCatat                                                                                                           >  2:871407/1‑140 (MQ=255)                cGTTTTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATg                                                                                                          >  1:85772/1‑140 (MQ=255)                cGTTTTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATg                                                                                                          >  1:517233/1‑140 (MQ=255)                 gTTTTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGc                                                                                                         >  2:611517/1‑140 (MQ=255)                     tGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAaca                                                                                                     <  2:1084338/140‑1 (MQ=255)                         aaTCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAAt                                                                                                 >  2:989753/1‑140 (MQ=255)                            cTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAAttgt                                                                                              <  1:227953/140‑1 (MQ=255)                              gAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAAttgttg                                                                                            <  1:355400/140‑1 (MQ=255)                                gCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGga                                                                                          <  2:719416/140‑1 (MQ=255)                                 cTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGgat                                                                                         <  1:502314/140‑1 (MQ=255)                                 cTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGgat                                                                                         <  1:971236/140‑1 (MQ=255)                                   cATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGTCGGTGGGTAATGCATATGCAACACAATTGTTGgatga                                                                                       <  1:477486/140‑1 (MQ=255)                                    aTAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGgatgat                                                                                      >  2:1177043/1‑140 (MQ=255)                                     tAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGAtt                                                                                     <  2:81568/140‑1 (MQ=255)                                      aGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATta                                                                                    >  2:80689/1‑140 (MQ=255)                                        gTTATTTGATCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCGTATGCAACACAATTGTTGGATGATtata                                                                                  <  2:509715/140‑1 (MQ=255)                                        gTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATtata                                                                                  <  2:243504/140‑1 (MQ=255)                                         ttATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGgat                                                                                         <  1:726836/132‑1 (MQ=255)                                         ttATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGgat                                                                                         >  2:726836/1‑132 (MQ=255)                                           aTTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGgat                                                                                         >  2:494925/1‑130 (MQ=255)                                           aTTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGgat                                                                                         <  1:494925/130‑1 (MQ=255)                                           aTTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGgat                                                                                         <  2:471178/130‑1 (MQ=255)                                           aTTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGgat                                                                                         >  1:471178/1‑130 (MQ=255)                                           aTTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGta                                                                               >  2:394945/1‑140 (MQ=255)                                           aTTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATATATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGta                                                                               >  2:761498/1‑140 (MQ=255)                                            tttGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGgat                                                                                         <  2:1186439/129‑1 (MQ=255)                                            tttGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGgat                                                                                         >  1:1186439/1‑129 (MQ=255)                                             ttGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAAttgttg                                                                                            <  2:911070/125‑1 (MQ=255)                                             ttGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAAttgttg                                                                                            >  1:911070/1‑125 (MQ=255)                                             ttGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGtata                                                                             <  1:611517/140‑1 (MQ=255)                                              tGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATaa                                                                            <  1:473131/140‑1 (MQ=255)                                                aCCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAAtt                                                                          <  1:1177043/140‑1 (MQ=255)                                                aCCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAAtt                                                                          <  2:472554/140‑1 (MQ=255)                                                aCCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAAtt                                                                          <  1:272362/140‑1 (MQ=255)                                                aCCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAAtt                                                                          <  1:973846/140‑1 (MQ=255)                                                  cAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGgatga                                                                                       >  2:12204/1‑125 (MQ=255)                                                  cAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGgatga                                                                                       <  1:12204/125‑1 (MQ=255)                                                        tgtttgttAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTatat                                                                  <  2:66736/140‑1 (MQ=255)                                                          tttgttAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGa                                                                >  2:1728/1‑140 (MQ=255)                                                          tttgttAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGa                                                                <  2:86223/140‑1 (MQ=255)                                                                aaTCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACtgatg                                                          >  2:540054/1‑140 (MQ=255)                                                                           tggatggTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGGAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCg                                               >  1:720081/1‑140 (MQ=255)                                                                            ggatggTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGa                                              >  1:283203/1‑140 (MQ=255)                                                                                  ttAATCTATGAAACTGAAAAAACTGAACGGGTTTAGTTTGGGGCTTATTGACCTGGCGGTGGGCAATCCATCTGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGaaa                                        >  2:904774/1‑140 (MQ=255)                                                                                    aaTCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATc                                      >  1:711991/1‑140 (MQ=255)                                                                                     aTCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCa                                     >  1:944306/1‑140 (MQ=255)                                                                                      tatATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCaa                                    <  1:761498/138‑1 (MQ=255)                                                                                      tCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCaa                                    <  1:394945/140‑1 (MQ=255)                                                                                       cTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCaaa                                   >  2:798447/1‑140 (MQ=255)                                                                                          tGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGat                                <  2:421410/140‑1 (MQ=255)                                                                                          tGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGat                                >  1:802351/1‑140 (MQ=255)                                                                                            aaaCTGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGataa                              >  2:946473/1‑140 (MQ=255)                                                                                                tGAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGATaataat                          >  1:343368/1‑140 (MQ=255)                                                                                                 gAAAAAACTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGATAATAATc                         >  1:548356/1‑140 (MQ=255)                                                                                                     aaaCTCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGATAATAATCCGAt                     <  1:362340/140‑1 (MQ=255)                                                                                                         tCCCCGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGATAATAATCCGATAAGt                 >  1:719947/1‑140 (MQ=255)                                                                                                           cccGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGATAATAATCCGATAAGTaa               <  1:1728/140‑1 (MQ=255)                                                                                                            ccGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGATAATAATCCGATAAGTAAt              >  2:64367/1‑140 (MQ=255)                                                                                                             cGGGTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGATAATAATCCGATAAGTAATg             <  2:517233/140‑1 (MQ=255)                                                                                                               ggTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGATAATAATCCGATAAGTAATGga           <  1:1041481/140‑1 (MQ=255)                                                                                                                gTTTAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGATAATAATCCGATAAGTAATGgag          <  2:283203/140‑1 (MQ=255)                                                                                                                 tttAGTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGAATGAAATCAAAGATAATAATCCGATAAGTAATGgaga         <  1:871407/140‑1 (MQ=255)                                                                                                                     gTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGATAATAATCCGATAAGTAATGga           <  1:624621/134‑1 (MQ=255)                                                                                                                     gTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGATAATAATCCGATAAGTAATGga           >  2:624621/1‑134 (MQ=255)                                                                                                                     gTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGATAATAATCCGATAAGTAATGGAGAGTAt     <  2:216444/140‑1 (MQ=255)                                                                                                                     gTTTGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGATAATAATCCGATAAGTAATGGAGAGTAt     <  2:381964/140‑1 (MQ=255)                                                                                                                        tGGGGCTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGATAATAATCCGATAAGTAATGGAGAGTATCTa  >  2:409391/1‑140 (MQ=255)                                                                                                                            |                                                                                                                                        TTTGTCTTTACCCTCCGTTTTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCCAATGAATGGATGGTTAATCTATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGACTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGATAATAATCCGATAAGTAATGGAGAGTATCTA  >  NC_000913/1219513‑1219771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑