Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 845,630 (T)6→5 intergenic (‑150/+111) ybiO ← / ← glnQ moderate conductance mechanosensitive channel/L‑glutamine ABC transporter ATP binding subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913845,6250T.100.0% 246.0 / NA 57intergenic (‑145/+116)ybiO/glnQmoderate conductance mechanosensitive channel/L‑glutamine ABC transporter ATP binding subunit
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (27/30);  total (27/30)

CCAGTGAGAAAATAGAGCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAA  >  NC_000913/845488‑845759
                                                                                                                                         |                                                                                                                                      
ccAGTGAGAAAATAGAGCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCttt                                                                                                                                      >  1:832433/1‑140 (MQ=255)
ccAGTGAGAAAATAGAGCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCttt                                                                                                                                      <  2:52054/140‑1 (MQ=255)
            tAGAGCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATgcg                                                                                                                         <  2:1119343/140‑1 (MQ=255)
             agagCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATgcgg                                                                                                                        >  1:325084/1‑140 (MQ=255)
              gagCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATgcggc                                                                                                                       >  2:1152855/1‑140 (MQ=255)
               agCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATgcggcg                                                                                                                      >  2:944031/1‑140 (MQ=255)
                gCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGt                                                                                                                     >  1:141944/1‑140 (MQ=255)
                 cAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTg                                                                                                                    <  2:77831/140‑1 (MQ=255)
                 cAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTg                                                                                                                    <  1:944031/140‑1 (MQ=255)
                 cAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTg                                                                                                                    <  2:734053/140‑1 (MQ=255)
                 cAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTg                                                                                                                    <  2:400868/140‑1 (MQ=255)
                 cAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTg                                                                                                                    <  1:624251/140‑1 (MQ=255)
                  aaaaaGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGa                                                                                                                   <  2:425769/140‑1 (MQ=255)
                    aaaGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAAc                                                                                                                 >  1:618584/1‑140 (MQ=255)
                     tcctccaGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTg                                                                                                                    <  2:977684/130‑1 (MQ=255)
                     tcctccaGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTg                                                                                                                    >  1:977684/7‑136 (MQ=255)
                            gTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATc                                                                                                         <  1:96285/140‑1 (MQ=255)
                                 gATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTcc                                                                                                    >  1:707490/1‑140 (MQ=255)
                                   tGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTa                                                                                                  <  2:736273/140‑1 (MQ=255)
                                    gCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTAc                                                                                                 >  1:524991/1‑140 (MQ=255)
                                      tGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACaa                                                                                               >  2:170762/1‑140 (MQ=255)
                                       ggaggaGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATc                                                                                                         <  2:835721/129‑1 (MQ=255)
                                       ggaggaGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATc                                                                                                         >  1:835721/1‑129 (MQ=255)
                                       ggaggaGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAg                                                                                              >  1:849986/1‑140 (MQ=255)
                                       ggaggaGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAg                                                                                              >  2:1073752/1‑140 (MQ=255)
                                       ggaggaGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAg                                                                                              >  2:579861/1‑140 (MQ=255)
                                       ggaggaGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAg                                                                                              >  2:370146/1‑140 (MQ=255)
                                             ggggCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATg                                                                                        <  2:141944/140‑1 (MQ=255)
                                               ggCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCa                                                                                      <  1:370146/140‑1 (MQ=255)
                                                          aTGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAg                                                                           <  2:524991/140‑1 (MQ=255)
                                                            gagaGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGtt                                                                         <  1:579861/140‑1 (MQ=255)
                                                               agGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGcc                                                                      >  1:1062913/1‑140 (MQ=255)
                                                                 gAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAg                                                                    <  1:396964/140‑1 (MQ=255)
                                                                    tCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGata                                                                 <  2:915020/140‑1 (MQ=255)
                                                                    tCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGata                                                                 <  2:453862/140‑1 (MQ=255)
                                                                    tCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATATTAATAAGTTGCCAGata                                                                 <  1:1152855/140‑1 (MQ=255)
                                                                        gtgtGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCt                                                             >  2:1083779/1‑140 (MQ=255)
                                                                           tgCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTa                                                          <  2:325084/140‑1 (MQ=255)
                                                                             ccTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAgg                                                        >  1:183956/1‑140 (MQ=255)
                                                                              cTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGc                                                       <  1:184186/140‑1 (MQ=255)
                                                                              cTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGc                                                       <  2:707490/140‑1 (MQ=255)
                                                                                  cTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGa                                                   >  1:80262/1‑140 (MQ=255)
                                                                                   tttCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGAt                                                  <  2:183956/140‑1 (MQ=255)
                                                                                       gggTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGc                                              >  2:423579/1‑140 (MQ=255)
                                                                                           gAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAg                                          <  1:1083779/140‑1 (MQ=255)
                                                                                                   ggaAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAg                                  >  2:92268/1‑140 (MQ=255)
                                                                                                   ggaAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAg                                  >  1:343062/1‑140 (MQ=255)
                                                                                                    gaAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCACGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAgg                                 >  1:1079245/1‑140 (MQ=255)
                                                                                                      aGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCa                               <  1:929164/140‑1 (MQ=255)
                                                                                                        ggATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAt                             <  1:343689/140‑1 (MQ=255)
                                                                                                        ggATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAt                             <  2:618584/140‑1 (MQ=255)
                                                                                                         gATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTTTCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtg                            <  2:214794/140‑1 (MQ=255)
                                                                                                              tAAGCAGGTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCt                       >  2:1069401/1‑140 (MQ=255)
                                                                                                                     gTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAt                             <  2:1145707/127‑1 (MQ=255)
                                                                                                                     gTTGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAt                             >  1:1145707/1‑127 (MQ=255)
                                                                                                                       tGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTc                        <  2:1006500/130‑1 (MQ=255)
                                                                                                                       tGCTGACAACGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTc                        >  1:1006500/1‑130 (MQ=255)
                                                                                                                               aCGTGCGGGCTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGtgctg      >  2:671473/1‑140 (MQ=255)
                                                                                                                                   gCGGGCTTTTTGTCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCaaa  >  1:82805/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                      
CCAGTGAGAAAATAGAGCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAA  >  NC_000913/845488‑845759

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: