New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3923228	77 (1.240)	14 (0.220) +CACCAGCT	3/234	6.0	15.2%	coding (453/624 nt)	rsmG	16S rRNA m(7)G527 methyltransferase
	?	NC_000913	3923229 =	81 (1.180)					coding (452/624 nt)	rsmG	16S rRNA m(7)G527 methyltransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAATATTCTCCAGTTTAAGCTCATGTTGCACCTGACGAAG  >  NC_000913/3923090‑3923368                                                                                                                                                    |                                                                                                                                            aCGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑c                                                                                                                                             <  2:214232/140‑1 (MQ=255)  cGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑Ca                                                                                                                                            >  2:584393/1‑140 (MQ=255)  cGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACAGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑Ca                                                                                                                                            >  1:1138186/1‑140 (MQ=255)   gTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CAc                                                                                                                                           <  2:327978/140‑1 (MQ=255)     tCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑c                                                                                                                                             <  2:598141/136‑1 (MQ=255)     tCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑c                                                                                                                                             >  1:598141/1‑136 (MQ=255)     tCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCa                                                                                                                                         >  1:1074263/1‑140 (MQ=255)     tCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCa                                                                                                                                         >  2:918573/1‑140 (MQ=255)     tCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCa                                                                                                                                         >  2:111642/1‑140 (MQ=255)      cGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAg                                                                                                                                        >  2:102706/1‑140 (MQ=255)            ccAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCAcc                                                                                                                                  <  1:358043/140‑1 (MQ=255)               gggCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCata                                                                                                                               <  1:626625/140‑1 (MQ=255)                ggCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCacat                                                                                                                              >  1:257397/1‑140 (MQ=255)                 gCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATc                                                                                                                             >  2:229328/1‑140 (MQ=255)                     gAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTc                                                                                                                         >  2:177722/1‑140 (MQ=255)                        ccTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCaga                                                                                                                      <  1:677268/140‑1 (MQ=255)                           gAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCagagag                                                                                                                   >  2:1075616/1‑140 (MQ=255)                           gAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCagagag                                                                                                                   >  2:943311/1‑140 (MQ=255)                                    ccACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAgcg                                                                                                          <  1:1075616/140‑1 (MQ=255)                                         gATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCt                                                                                                     >  1:451285/1‑140 (MQ=255)                                               aCCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTAc                                                                                               <  1:943311/140‑1 (MQ=255)                                               aCCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTAc                                                                                               >  2:106944/1‑140 (MQ=255)                                                  tGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGcc                                                                                            >  1:96888/1‑140 (MQ=255)                                                  tGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGcc                                                                                            >  1:1007548/1‑140 (MQ=255)                                                    atatTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCAt                                                                                          >  1:282718/1‑140 (MQ=255)                                                    atatTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCAt                                                                                          >  1:1147530/1‑140 (MQ=255)                                                      atTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACg                                                                                              <  2:732976/134‑1 (MQ=255)                                                      atTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACg                                                                                              >  1:732976/1‑134 (MQ=255)                                                          ttcGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATg                                                                                    >  1:368929/1‑140 (MQ=255)                                                          ttcGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATg                                                                                    >  1:837136/1‑140 (MQ=255)                                                          ttcGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATg                                                                                    >  1:153949/1‑140 (MQ=255)                                                            cGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATggc                                                                                  >  1:400904/1‑140 (MQ=255)                                                              ggCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATggcgg                                                                                >  2:594257/1‑140 (MQ=255)                                                              ggCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATggcgg                                                                                >  1:652941/1‑140 (MQ=255)                                                              ggCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATggcgg                                                                                <  1:229328/140‑1 (MQ=255)                                                              ggCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATggcgg                                                                                >  2:410097/1‑140 (MQ=255)                                                               gCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATggcggc                                                                               >  1:915441/1‑140 (MQ=255)                                                                caacaaAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGct                                                                              <  1:1004094/140‑1 (MQ=255)                                                                 aacaaAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGGCACCAGCTCACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAAt                                                                                     >  1:544705/1‑140 (MQ=255)                                                                 aacaaAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGctc                                                                             >  2:925799/1‑140 (MQ=255)                                                                   caaAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTg                                                                           <  1:102706/140‑1 (MQ=255)                                                                        cGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGa                                                                      <  2:915441/140‑1 (MQ=255)                                                                        cGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGa                                                                      <  2:837136/140‑1 (MQ=255)                                                                        cGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGa                                                                      <  2:1007548/140‑1 (MQ=255)                                                                        cGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGa                                                                      >  1:878533/1‑140 (MQ=255)                                                                         gATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGaa                                                                     <  1:878579/140‑1 (MQ=255)                                                                          aTTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGaaa                                                                    <  1:918573/140‑1 (MQ=255)                                                                          aTTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGaaa                                                                    <  1:584393/140‑1 (MQ=255)                                                                          aTTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGaaa                                                                    <  2:451285/140‑1 (MQ=255)                                                                          aTTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGaaa                                                                    <  1:320066/140‑1 (MQ=255)                                                                          aTTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGaaa                                                                    <  2:153949/140‑1 (MQ=255)                                                                          aTTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGaaa                                                                    <  2:577073/140‑1 (MQ=255)                                                                          aTTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACAGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGaaa                                                                    <  2:1138186/140‑1 (MQ=255)                                                                               aTCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACtctt                                                               <  1:111642/140‑1 (MQ=255)                                                                               aTCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACtctt                                                               <  2:690165/140‑1 (MQ=255)                                                                                  ttCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTa                                                            <  2:918766/140‑1 (MQ=255)                                                                                    ccGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGaaa                                                                    <  1:830672/130‑1 (MQ=255)                                                                                    ccGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGaaa                                                                    >  2:830672/1‑130 (MQ=255)                                                                                    ccGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTAcc                                                          <  2:878533/140‑1 (MQ=255)                                                                                    ccGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTAcc                                                          <  2:1074263/140‑1 (MQ=255)                                                                                    ccGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTAcc                                                          <  1:925799/140‑1 (MQ=255)                                                                                    ccGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTAcc                                                          <  1:1092686/140‑1 (MQ=255)                                                                                    ccGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTAcc                                                          >  2:767961/1‑140 (MQ=255)                                                                                    ccGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTAcc                                                          <  2:368929/140‑1 (MQ=255)                                                                                     cGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTAccc                                                         <  2:583548/140‑1 (MQ=255)                                                                                         aTTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGct                                                     <  1:594257/140‑1 (MQ=255)                                                                                          tttGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGaaa                                                                    <  2:386339/124‑1 (MQ=255)                                                                                          tttGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGaaa                                                                    >  1:386339/1‑124 (MQ=255)                                                                                           ttGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGctct                                                   >  2:874638/1‑140 (MQ=255)                                                                                               ccTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTAc                                               <  2:272467/140‑1 (MQ=255)                                                                                               ccTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTAc                                               <  2:1147530/140‑1 (MQ=255)                                                                                                  ttCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTgg                                            >  2:640356/1‑140 (MQ=255)                                                                                                  ttCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTgg                                            >  2:594773/1‑140 (MQ=255)                                                                                                  ttCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTgg                                            >  2:551901/1‑140 (MQ=255)                                                                                                  ttCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTgg                                            >  1:843885/1‑140 (MQ=255)                                                                                                    cAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGtt                                          <  1:616139/140‑1 (MQ=255)                                                                                                      gcgcGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGGCACCAGCTCACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTa                                                <  2:544705/140‑1 (MQ=255)                                                                                                        gcgTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAat                                      >  2:633809/1‑140 (MQ=255)                                                                                                        gcgTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAat                                      >  2:952948/1‑140 (MQ=255)                                                                                                         cgTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAata                                     >  2:538658/1‑140 (MQ=255)                                                                                                              aaaCGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAATATtctc                                <  1:106944/140‑1 (MQ=255)                                                                                                              aaaCGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAATATtctc                                <  1:952948/140‑1 (MQ=255)                                                                                                              aaaCGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAATATtctc                                <  1:874638/140‑1 (MQ=255)                                                                                                              aaaCGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAATATtctc                                <  1:26604/140‑1 (MQ=255)                                                                                                                   gCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAATATTCTCCAGtt                           >  1:359552/1‑140 (MQ=255)                                                                                                                   gCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAATATTCTCCAGtt                           <  2:843885/140‑1 (MQ=255)                                                                                                                        gCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAATATTCTCCAGTTTAAGc                      <  2:96888/140‑1 (MQ=255)                                                                                                                        gCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAATATTCTCCAGTTTAAGc                      <  1:538658/140‑1 (MQ=255)                                                                                                                        gCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAATATTCTCCAGTTTAAGc                      <  1:633809/140‑1 (MQ=255)                                                                                                                              cAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAATATtctc                                <  2:341535/124‑1 (MQ=255)                                                                                                                              cAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAATATtctc                                >  1:341535/1‑124 (MQ=255)                                                                                                                                      tggtgg‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAATCTCTTCTACCCTGCTCTGTACTGGTTCAATATTCTCCAGTTTAAGCTCATGTTGCACCTg        >  2:964321/1‑140 (MQ=255)                                                                                                                                      tggtgg‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAATATTCTCCAGTTTAAGCt                     >  1:565265/1‑127 (MQ=255)                                                                                                                                      tggtgg‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAATATTCTCCAGTTTAAGCt                     <  2:565265/127‑1 (MQ=255)                                                                                                                                      tggtgg‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAATATTCTCCAGTTTAAGCTCATGTTGCACCTg        >  2:961555/1‑140 (MQ=255)                                                                                                                                                    cACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCTGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAATATTCTCCAGTTTAAGCTCATGTTGCACCTGACGAAg  >  1:666268/1‑140 (MQ=255)                                                                                                                                                    cACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAATATTCTCCAGTTTAAGCTCATGTTGCACCTGACGAAg  >  2:344727/1‑140 (MQ=255)                                                                                                                                                    |                                                                                                                                            ACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGG‑‑‑‑‑‑‑‑CACCAGCTCACCATATCGTTCAGAGAGGCAAAAGCGCGGCTAATTACGCCATCAAATGGCGGCTCTGAAGGAAACTCTTCTACCCTGCTCTGTACTGGTTCAATATTCTCCAGTTTAAGCTCATGTTGCACCTGACGAAG  >  NC_000913/3923090‑3923368

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.