Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	601,989	A→G	T11A (ACT→GCT)	pheP →	phenylalanine:H(+) symporter PheP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	601,989	0	A	G	100.0%	237.8 / NA	66	T11A (ACT→GCT)	pheP	phenylalanine:H(+) symporter PheP
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (27/39);  total (27/39)

ATAAAAGCAGGATACCCCGTTTAACCGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATACTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCTTGGCATTGGCCCGGCGATTCAGATGGCGGGTCCG  >  NC_000913/601854‑602120                                                                                                                                        |                                                                                                                                    aTAAAAGCAGGATACCCCGTTTAACCGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGAtgctgc                                                                                                                                 >  1:135862/1‑140 (MQ=255) aTAAAAGCAGGATACCCCGTTTAACCGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGAtgctgc                                                                                                                                 >  2:776433/1‑140 (MQ=255)   aaaaGCAGGATACCCCGTTTAACCGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGt                                                                                                                               >  1:466506/1‑140 (MQ=255)    aaaGCAGGATACCCCGTTTAACCGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTc                                                                                                                              <  2:940551/140‑1 (MQ=255)         aGGATACCCCGTTTAACCGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATc                                                                                                                         >  2:425804/1‑140 (MQ=255)         aGGATACCCCGTTTAACCGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATc                                                                                                                         >  2:595882/1‑140 (MQ=255)           gATACCCCGTTTAACCGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCaa                                                                                                                       <  2:1067403/140‑1 (MQ=255)                  cGTTTAACCGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGa                                                                                                                >  2:329298/1‑140 (MQ=255)                    tttAACCGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACg                                                                                                              <  1:329298/140‑1 (MQ=255)                    tttAACCGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACg                                                                                                              <  2:135862/140‑1 (MQ=255)                     ttAACCGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGc                                                                                                             >  1:905197/1‑140 (MQ=255)                         ccGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGa                                                                                                                <  1:141209/133‑1 (MQ=255)                         ccGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGa                                                                                                                >  2:141209/1‑133 (MQ=255)                         ccGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCa                                                                                                         <  1:776433/140‑1 (MQ=255)                         ccGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCa                                                                                                         >  1:844317/1‑140 (MQ=255)                          cGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCAt                                                                                                        >  1:1158144/1‑140 (MQ=255)                           gtgtGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATc                                                                                                       <  1:1009049/140‑1 (MQ=255)                           gtgtGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATc                                                                                                       <  2:1118936/140‑1 (MQ=255)                           gtgtGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATc                                                                                                       <  1:238191/140‑1 (MQ=255)                            tgtgGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATcg                                                                                                      <  2:128853/140‑1 (MQ=255)                            tgtgGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATcg                                                                                                      <  2:325267/140‑1 (MQ=255)                            tgtgGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATcg                                                                                                      <  2:466327/140‑1 (MQ=255)                              tgGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATcgcg                                                                                                    <  2:75821/140‑1 (MQ=255)                              tgGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATcgcg                                                                                                    <  2:341907/140‑1 (MQ=255)                              tgGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATcgcg                                                                                                    >  1:75821/1‑140 (MQ=255)                              tgGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATcgcg                                                                                                    <  1:801592/140‑1 (MQ=255)                               ggATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCgg                                                                                                   <  1:765713/140‑1 (MQ=255)                                    gtgtCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAGCGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTAc                                                                                              <  1:214177/140‑1 (MQ=255)                                        cTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATaa                                                                                          <  2:169089/140‑1 (MQ=255)                                        cTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATaa                                                                                          <  2:230761/140‑1 (MQ=255)                                        cTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATaa                                                                                          <  1:595882/140‑1 (MQ=255)                                        cTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATaa                                                                                          <  1:425804/140‑1 (MQ=255)                                           gCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCg                                                                                       <  1:570472/140‑1 (MQ=255)                                           gCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCg                                                                                       <  1:995811/140‑1 (MQ=255)                                           gCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCg                                                                                       <  1:53124/140‑1 (MQ=255)                                           gCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCg                                                                                       <  2:466506/140‑1 (MQ=255)                                             gacgaTGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTc                                                                                     <  1:639942/140‑1 (MQ=255)                                               cgaTGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCat                                                                                   >  1:375540/1‑140 (MQ=255)                                                 aTGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCatat                                                                                 >  1:959972/1‑140 (MQ=255)                                                                  aaaGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTgg                                                                >  2:685563/1‑140 (MQ=255)                                                                   aaGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTggg                                                               <  1:685563/140‑1 (MQ=255)                                                                       tGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGgc                                                           >  2:259149/1‑140 (MQ=255)                                                                        gCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGgcg                                                          >  1:997838/1‑140 (MQ=255)                                                                         ccccTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGgcgc                                                         >  1:321492/1‑140 (MQ=255)                                                                            cTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAAt                                                      <  1:1052012/140‑1 (MQ=255)                                                                                 caaAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTa                                                 <  2:959972/140‑1 (MQ=255)                                                                                 caaAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTa                                                 >  1:170655/1‑140 (MQ=255)                                                                                    aaaaGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTg                                              >  2:1089430/1‑140 (MQ=255)                                                                                      aaGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGt                                            <  1:7735/140‑1 (MQ=255)                                                                                       aGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTc                                           <  1:87922/140‑1 (MQ=255)                                                                                               aGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCtt                                   >  1:93102/1‑140 (MQ=255)                                                                                               aGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCtt                                   <  2:916561/140‑1 (MQ=255)                                                                                               aGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCtt                                   >  1:488086/1‑140 (MQ=255)                                                                                                     aaGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCTTGGCAtt                             >  1:1112167/1‑140 (MQ=255)                                                                                                      aGGCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCTTGGCATTg                            >  2:772304/1‑140 (MQ=255)                                                                                                       ggCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCTTGGCATTgg                           <  1:259149/140‑1 (MQ=255)                                                                                                       ggCGTGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCTTGGCATTgg                           >  2:69620/1‑140 (MQ=255)                                                                                                           tGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCTTGGCATTGGCCCg                       >  2:232062/1‑140 (MQ=255)                                                                                                           tGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCTTGGCATTGGCCCg                       >  2:747482/1‑140 (MQ=255)                                                                                                           tGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCTTGGCATTGGCCCg                       >  1:24333/1‑140 (MQ=255)                                                                                                           tGAAAAACGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCTTGGCATTGGCCCg                       >  2:910617/1‑140 (MQ=255)                                                                                                                 aCGCGTCAACCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCTTGGCATTGGCCCGGCGAtt                 >  1:397620/1‑140 (MQ=255)                                                                                                                        aaCCGTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCTTGGCATTGGCCCGGCGATTCAGATgg          <  2:24333/140‑1 (MQ=255)                                                                                                                            gTATCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCTTGGCATTGGCCCGGCGATTCAGATGGCggg      <  2:858800/140‑1 (MQ=255)                                                                                                                              aTCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCTTGGCATTGGCCCGGCGATTCAGATGGCGGGTc    <  1:747482/140‑1 (MQ=255)                                                                                                                               tCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCTTGGCATTGGCCCGGCGATTCAGATGGCGGGTcc   <  2:905197/140‑1 (MQ=255)                                                                                                                               tCGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCTTGGCATTGGCCCGGCGATTCAGATGGCGGGTcc   <  1:910617/140‑1 (MQ=255)                                                                                                                                cGGAAGATGCTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCTTGGCATTGGCCCGGCGATTCAGATGGCGGGTCCg  <  2:375540/140‑1 (MQ=255)                                                                                                                                        |                                                                                                                                    ATAAAAGCAGGATACCCCGTTTAACCGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGGAAGATACTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCTTGGCATTGGCCCGGCGATTCAGATGGCGGGTCCG  >  NC_000913/601854‑602120

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑