BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,843,478	(C)_5→4	coding (312/1335 nt)	adeQ ←	adenine transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,843,474	0	C	.	99.0%	429.5 / ‑2.3	101	coding (316/1335 nt)	adeQ	adenine transporter
Reads supporting (aligned to +/- strand): ref base C (1/0); new base . (52/48); total (53/48)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01

Only 100 of 106 total aligned reads displayed.

CCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCCCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCAAACAGGTGGTAACAAACACCACTTTC  >  NC_000913/3843347‑3843607

ccAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCccacgaccacg                                                                                                                          <  2:1510966/140‑1 (MQ=255)

ccAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCccacgaccacg                                                                                                                          <  2:1322129/140‑1 (MQ=255)

 cAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGcccca                                                                                                                                   >  1:779161/1‑130 (MQ=255)

 cAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGcccca                                                                                                                                   <  2:779161/131‑2 (MQ=255)

    tACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAgg                                                                                                                      >  1:443538/1‑140 (MQ=255)

    tACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAgg                                                                                                                      >  2:168637/1‑140 (MQ=255)

    tACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAgg                                                                                                                      >  2:806611/1‑140 (MQ=255)

       gTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGaa                                                                                                                        <  1:511196/135‑1 (MQ=255)

       gTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGaa                                                                                                                        >  2:511196/1‑135 (MQ=255)

        tAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCaaa                                                                                                                  >  2:241571/1‑140 (MQ=255)

         aaaCTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAaag                                                                                                                 >  1:1000851/1‑140 (MQ=255)

         aaaCTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAaag                                                                                                                 >  2:1203927/1‑140 (MQ=255)

              tAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCccacgac                                                                                                                              <  1:1029622/122‑1 (MQ=255)

              tAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCccacgac                                                                                                                              >  2:1029622/1‑122 (MQ=255)

                aGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCTCATCG‑CCCCACGACCACG‑AGGCAAAGAAGGCGtt                                                                                                         >  1:1262169/1‑140 (MQ=255)

                aGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCGCACGACCACGAAGGCAAAGAAGGCGt                                                                                                          >  1:1061558/1‑140 (MQ=255)

                             gaTCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCTCATCG‑CCCCACGACCACG‑AGGCAAAGAAGGCGTTCAGCCCCATTGcc                                                                                            <  2:1262169/140‑1 (MQ=255)

                              atcatcCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGcc                                                                                            <  2:467648/140‑1 (MQ=255)

                                catcCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCgg                                                                                          >  1:1313374/1‑140 (MQ=255)

                                catcCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCgg                                                                                          >  1:980369/1‑140 (MQ=255)

                                 atcCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGa                                                                                         >  1:1311746/1‑140 (MQ=255)

                                  tcCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGcc                                                                                            <  1:1307879/136‑1 (MQ=255)

                                  tcCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGcc                                                                                            >  2:1307879/1‑136 (MQ=255)

                                  tcCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGc                                                                                             <  2:890816/135‑1 (MQ=255)

                                  tcCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAg                                                                                        >  1:80613/1‑140 (MQ=255)

                                   ccAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGc                                                                                       >  2:700491/1‑140 (MQ=255)

                                    cAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCTAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGcc                                                                                      <  2:1412300/140‑1 (MQ=255)

                                        aCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAgcg                                                                                  <  1:168637/140‑1 (MQ=255)

                                         ccGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAgcgc                                                                                 <  2:399771/140‑1 (MQ=255)

                                         ccGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAgcgc                                                                                 <  2:820194/140‑1 (MQ=255)

                                          cGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGcc                                                                                >  1:1000862/1‑140 (MQ=255)

                                          cGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGcc                                                                                >  2:1487294/1‑140 (MQ=255)

                                          cGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGcc                                                                                <  1:1203927/140‑1 (MQ=255)

                                          cGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGcc                                                                                >  1:731379/1‑140 (MQ=255)

                                            gATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCa                                                                                     >  1:709873/1‑133 (MQ=255)

                                            gATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAgcgc                                                                                 <  2:236507/137‑1 (MQ=255)

                                            gATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAgcgc                                                                                 >  1:236507/1‑137 (MQ=255)

                                            gATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCAc                                                                              >  1:431394/1‑140 (MQ=255)

                                            gATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCAc                                                                              >  2:894107/1‑140 (MQ=255)

                                            gATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCAc                                                                              >  1:21435/1‑140 (MQ=255)

                                             aTACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACg                                                                             <  2:766228/140‑1 (MQ=255)

                                               ccGAAACAGCGTGAGCAAAAATAATCCCACCGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACggg                                                                           <  2:1061558/139‑1 (MQ=255)

                                                 gAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTa                                                                         <  1:1303324/140‑1 (MQ=255)

                                                 gAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTa                                                                         <  1:241571/140‑1 (MQ=255)

                                                   aaCAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAg                                                                       >  1:74778/1‑140 (MQ=255)

                                                   aaCAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAg                                                                       >  1:115365/1‑140 (MQ=255)

                                                       gCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAg                                                                   <  2:731379/140‑1 (MQ=255)

                                                       gCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAg                                                                   <  2:1313374/140‑1 (MQ=255)

                                                       gCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAg                                                                   <  2:1000851/140‑1 (MQ=255)

                                                       gCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAg                                                                   <  1:894107/140‑1 (MQ=255)

                                                       gCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAg                                                                   <  1:803816/140‑1 (MQ=255)

                                                       gCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAg                                                                   >  1:1332917/1‑140 (MQ=255)

                                                        cGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTa                                                                         >  2:17590/1‑133 (MQ=255)

                                                        cGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTa                                                                         <  1:17590/133‑1 (MQ=255)

                                                        cGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGc                                                                  >  1:378216/1‑140 (MQ=255)

                                                        cGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGc                                                                  >  1:1237347/1‑140 (MQ=255)

                                                          tGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACggg                                                                           >  1:1374595/1‑129 (MQ=255)

                                                          tGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACggg                                                                           <  2:1374595/129‑1 (MQ=255)

                                                               aaaaaTAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATc                                                           <  1:721089/140‑1 (MQ=255)

                                                                aaaaTAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATcc                                                          >  2:802653/1‑140 (MQ=255)

                                                                 aaaTAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATccc                                                         <  1:806611/140‑1 (MQ=255)

                                                                 aaaTAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATccc                                                         <  1:610488/140‑1 (MQ=255)

                                                                 aaaTAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATccc                                                         <  1:655536/140‑1 (MQ=255)

                                                                      gTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGGCCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCg                                                    <  2:74778/140‑1 (MQ=255)

                                                                      gTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCg                                                    >  1:702085/1‑140 (MQ=255)

                                                                      gTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCg                                                    <  1:700491/140‑1 (MQ=255)

                                                                       tCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAg                                                                   >  2:156987/1‑124 (MQ=255)

                                                                       tCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAg                                                                   <  1:156987/124‑1 (MQ=255)

                                                                       gccAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCCCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCg                                                    >  2:1244937/2‑140 (MQ=255)

                                                                        ccAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCa                                                  <  2:1332917/140‑1 (MQ=255)

                                                                          aaCTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAAt                                                <  1:741489/140‑1 (MQ=255)

                                                                           aCTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATa                                               >  2:1059130/1‑140 (MQ=255)

                                                                               cgcCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGc                                           >  2:913911/1‑140 (MQ=255)

                                                                                 ccccAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCg                                                    >  2:72765/1‑129 (MQ=255)

                                                                                 ccccAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCg                                                    <  1:72765/129‑1 (MQ=255)

                                                                                            tGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGc                                 >  1:439978/1‑137 (MQ=255)

                                                                                            tGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGc                                 <  2:439978/137‑1 (MQ=255)

                                                                                              cgcCCATCCGGGTCTGCCAGGAGATGCCCATCG‑CCCCACGGCCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCa                            >  2:1507266/1‑140 (MQ=255)

                                                                                                cccATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCaaa                          <  1:363427/140‑1 (MQ=255)

                                                                                                cccATCCCGGCCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCaaa                          >  2:845913/1‑140 (MQ=255)

                                                                                                 ccATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCAAAc                         >  2:625672/1‑140 (MQ=255)

                                                                                                  cATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCAAACa                        <  1:1507266/140‑1 (MQ=255)

                                                                                                  cATCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCAAACa                        <  2:980369/140‑1 (MQ=255)

                                                                                                   aTCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATAcc                                    <  2:561545/127‑1 (MQ=255)

                                                                                                   aTCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATAcc                                    >  1:561545/1‑127 (MQ=255)

                                                                                                   aTCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCAAACAg                       >  1:948900/1‑140 (MQ=255)

                                                                                                   aTCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCAAACAg                       >  1:608317/1‑140 (MQ=255)

                                                                                                   aTCCCGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCAAACAg                       >  2:1054580/1‑140 (MQ=255)

                                                                                                      ccGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCAAACAggtg                    <  1:802653/140‑1 (MQ=255)

                                                                                                       cGGTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCAAACAggtgg                   <  2:378216/140‑1 (MQ=255)

                                                                                                         ggcTGCCGGGAGATGCCCATCG‑CCCCGCGACCGCGAAGGCAAAGAAGGCGTTCAGCCCCCTTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATACCCCCATCGCAATACTGCCGATACCGGCAATCAAACAGGTGGTa                 <  2:80613/138‑1 (MQ=255)

                                                                                                         gTCTGCCAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCAAACAGGTGGTa                 <  2:702085/140‑1 (MQ=255)

                                                                                                              ccAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCaaa                          <  2:771703/126‑1 (MQ=255)

                                                                                                              ccAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCaaa                          >  1:771703/1‑126 (MQ=255)

                                                                                                              ccAGGAGATGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCAAACAGGTGGTaacaaa            >  1:308842/1‑140 (MQ=255)

                                                                                                                  gagaTGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCAAACAGGTGGTAACAAAcacc        >  1:1148173/1‑140 (MQ=255)

                                                                                                                   agaTGCCCATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCAAACAGGTGGTAACAAAcacca       <  1:1059130/140‑1 (MQ=255)

                                                                                                                    gaTGCCCATCG‑CCCCACTACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCGATACTGCCGATACCGGCAATCAAACAGGTGGTAACAAAcaccac      >  2:865491/1‑140 (MQ=255)

                                                                                                                        cccATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCAAACAGGTGGTAACAAACACCACTTTc  <  1:1251408/140‑1 (MQ=255)

                                                                                                                        cccATCG‑CCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCAAACAGGTGGTAACAAACACCACTTTc  >  1:855005/1‑140 (MQ=255)

CCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCCCCCACGACCACGAAGGCAAAGAAGGCGTTCAGCCCCATTGCCGGAGCCAGCGCCACGGGTAAGTTAGCAAATATCCCCATCGCAATACTGCCGATACCGGCAATCAAACAGGTGGTAACAAACACCACTTTC  >  NC_000913/3843347‑3843607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`