BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,385,931	(A)_7→6	coding (228/315 nt)	yjeO →	conserved inner membrane protein YjeO

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,385,925	0	A	.	100.0%	406.1 / NA	94	coding (222/315 nt)	yjeO	conserved inner membrane protein YjeO
Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (48/46); total (48/46)

Only 100 of 104 total aligned reads displayed.

AGAGTGGATGATTGATGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCG  >  NC_000913/4385787‑4386060

agagTGGATGATTGATGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCGaa                                                                                                                                        >  1:155115/1‑140 (MQ=255)

   gTGGATGATTGATGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCGaaaaa                                                                                                                                     >  1:592558/1‑140 (MQ=255)

     ggATGATTGATGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCGaaaaaac                                                                                                                                   >  1:722819/1‑139 (MQ=255)

        tgattgatGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCGaaaaaacgcg                                                                                                                                <  2:1261748/140‑5 (MQ=255)

        tgattgatGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCGaaaaaacgcg                                                                                                                                <  2:1349236/140‑5 (MQ=255)

        tgattgatGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCGaaaaaacgcg                                                                                                                                <  2:269436/140‑5 (MQ=255)

         gattgatGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCgg                                                                                                                              <  2:726693/140‑1 (MQ=255)

         gattgatGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCgg                                                                                                                              <  2:1306452/140‑1 (MQ=255)

         gattgatGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCgg                                                                                                                              <  1:995922/140‑1 (MQ=255)

         gattgatGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCgg                                                                                                                              <  1:278916/140‑1 (MQ=255)

           ttgatGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCt                                                                                                                            <  2:178023/140‑1 (MQ=255)

           ttgatGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCt                                                                                                                            <  1:259564/140‑1 (MQ=255)

            tgatGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTg                                                                                                                           >  2:617186/1‑140 (MQ=255)

            tgatGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTg                                                                                                                           >  1:1383960/1‑140 (MQ=255)

            tgatGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTg                                                                                                                           >  2:567040/1‑140 (MQ=255)

              atGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCGaaaaaacgcg                                                                                                                                <  1:863069/134‑5 (MQ=255)

              atGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCGaaaaaacgcg                                                                                                                                <  1:945010/134‑5 (MQ=255)

              atGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCGaaaaaacgcg                                                                                                                                >  2:863069/1‑130 (MQ=255)

              atGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGc                                                                                                                             >  1:317405/1‑136 (MQ=255)

              atGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGc                                                                                                                             <  2:317405/136‑1 (MQ=255)

              atGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGt                                                                                                                         <  1:567040/140‑1 (MQ=255)

                ggACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGttt                                                                                                                       >  1:727645/1‑140 (MQ=255)

                ggACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGttt                                                                                                                       >  1:749683/1‑140 (MQ=255)

                ggACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGttt                                                                                                                       <  1:1052344/140‑1 (MQ=255)

                ggACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGttt                                                                                                                       >  1:1007272/1‑140 (MQ=255)

                   cgcgGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATATTGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCgg                                                                                                                              >  2:1298393/1‑130 (MQ=255)

                   cgcgGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATATTGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCgg                                                                                                                              <  1:1298393/130‑1 (MQ=255)

                   cgcgGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCt                                                                                                                            <  1:541807/132‑1 (MQ=255)

                   cgcgGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCt                                                                                                                            >  2:541807/1‑132 (MQ=255)

                     cgGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTa                                                                                                                  <  2:198140/140‑1 (MQ=255)

                      gggATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTa                                                                                                                  >  2:122052/1‑139 (MQ=255)

                      gggATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTa                                                                                                                  <  1:122052/139‑1 (MQ=255)

                              caacGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACcgc                                                                                                         <  2:722819/140‑1 (MQ=255)

                               aacGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACcgcg                                                                                                        <  2:929629/140‑1 (MQ=255)

                                acGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCgcgc                                                                                                       <  1:1006188/140‑1 (MQ=255)

                                  gTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTg                                                                                                     >  1:506903/1‑140 (MQ=255)

                                  gTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTg                                                                                                     >  1:1459540/1‑140 (MQ=255)

                                    cTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGc                                                                                                   >  2:559729/1‑140 (MQ=255)

                                    cTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTCTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGc                                                                                                   >  2:426163/1‑140 (MQ=255)

                                     tGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCt                                                                                                  >  2:197907/1‑140 (MQ=255)

                                     tGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCt                                                                                                  <  2:398081/140‑1 (MQ=255)

                                     tGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCt                                                                                                  >  2:522927/1‑140 (MQ=255)

                                       cGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACcgcg                                                                                                        <  1:1507716/132‑1 (MQ=255)

                                       cGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACcgcg                                                                                                        >  2:1507716/1‑132 (MQ=255)

                                        gATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTAtt                                                                                               <  2:1028180/140‑1 (MQ=255)

                                                      tctcGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTc                                                                                            <  1:1164751/129‑1 (MQ=255)

                                                      tctcGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTc                                                                                            >  2:1164751/1‑129 (MQ=255)

                                                      tctcGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCt                                                                                 >  1:711563/1‑140 (MQ=255)

                                                         cGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCtgtg                                                                              <  2:837604/140‑1 (MQ=255)

                                                         cGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCtgtg                                                                              <  2:155115/140‑1 (MQ=255)

                                                         cGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTCTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCtgtg                                                                              <  1:426163/140‑1 (MQ=255)

                                                           aagaagACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCtgtg                                                                              <  1:690500/138‑1 (MQ=255)

                                                           aagaagACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCtgtg                                                                              >  2:690500/1‑138 (MQ=255)

                                                                    aTACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTc                                                                   <  2:749683/140‑1 (MQ=255)

                                                                    aTACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTc                                                                   <  2:1007272/140‑1 (MQ=255)

                                                                     tACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCt                                                                  >  2:153200/1‑140 (MQ=255)

                                                                         cGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTgcgc                                                              <  1:123384/140‑1 (MQ=255)

                                                                          gTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCt                                                             >  2:182084/1‑140 (MQ=255)

                                                                           tGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTa                                                            <  2:229690/140‑1 (MQ=255)

                                                                            gATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTAt                                                           <  1:153200/140‑1 (MQ=255)

                                                                               gTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAg                                                        >  1:773801/1‑140 (MQ=255)

                                                                               gTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAg                                                        >  1:695533/1‑140 (MQ=255)

                                                                                    tgtgATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGttttt                                                   >  2:766247/1‑139 (MQ=255)

                                                                                            tGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCATCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAg                                           <  2:1336020/140‑1 (MQ=255)

                                                                                            tGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAg                                           <  2:727645/140‑1 (MQ=255)

                                                                                            tGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAg                                           <  2:1383960/140‑1 (MQ=255)

                                                                                            tGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAg                                           <  2:695533/140‑1 (MQ=255)

                                                                                            tGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAg                                           >  2:212148/1‑140 (MQ=255)

                                                                                            tGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAg                                           >  2:1147090/1‑140 (MQ=255)

                                                                                                gTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCgg                                       <  2:646618/140‑1 (MQ=255)

                                                                                                 ttACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGa                                      <  1:666655/140‑1 (MQ=255)

                                                                                                 ttACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGa                                      <  2:1033220/140‑1 (MQ=255)

                                                                                                 ttACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGa                                      <  2:108232/140‑1 (MQ=255)

                                                                                                 ttACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGa                                      <  1:522927/140‑1 (MQ=255)

                                                                                                  tACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGAt                                     >  2:884005/1‑140 (MQ=255)

                                                                                                  tACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGAt                                     >  2:111066/1‑140 (MQ=255)

                                                                                                   aCCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGAtt                                    <  2:773801/140‑1 (MQ=255)

                                                                                                   aCCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGAtt                                    >  2:1001512/1‑140 (MQ=255)

                                                                                                   aCCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGAtt                                    >  2:1235197/1‑140 (MQ=255)

                                                                                                     cGCTCTTTTTACCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTgg                                  >  2:1334844/1‑140 (MQ=255)

                                                                                                      gCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGt                                 <  2:506903/140‑1 (MQ=255)

                                                                                                       ctctTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGtt                                >  1:408651/1‑140 (MQ=255)

                                                                                                       ctctTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCAGATTGGtt                                >  1:581557/1‑140 (MQ=255)

                                                                                                         ctTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTgg                                  >  2:1304554/1‑136 (MQ=255)

                                                                                                         ctTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTgg                                  <  1:1304554/136‑1 (MQ=255)

                                                                                                            tttCCCTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATcc                           >  1:875248/1‑140 (MQ=255)

                                                                                                               cccTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGt                                 <  2:1335833/131‑1 (MQ=255)

                                                                                                               cccTTTTCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGt                                 >  1:1335833/1‑131 (MQ=255)

                                                                                                                  ttttCTCTGGTTCGCTTTGTGGCG‑AAGAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGcaca                     <  1:390387/140‑1 (MQ=255)

                                                                                                                  ttttCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGcaca                     <  1:182084/140‑1 (MQ=255)

                                                                                                                    ttCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGcacaca                   >  2:512642/1‑140 (MQ=255)

                                                                                                                    ttCTCTGGTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGGTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGcacaca                   >  2:141206/1‑140 (MQ=255)

                                                                                                                          ggTTCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGGTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaactta             >  2:1402886/1‑140 (MQ=255)

                                                                                                                            ttCGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaacttaca           <  2:498942/140‑1 (MQ=255)

                                                                                                                              cgatttGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaacttacaaa         >  2:923139/4‑140 (MQ=255)

                                                                                                                              cGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaacttacaaa         >  1:855669/1‑140 (MQ=255)

                                                                                                                              cGCTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGAGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaacttacaaa         >  2:1350847/1‑140 (MQ=255)

                                                                                                                                cTTTGTGGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaacttacaaact       >  1:358195/1‑140 (MQ=255)

                                                                                                                                   tgtgGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTcc    >  2:1385829/1‑140 (MQ=255)

                                                                                                                                     tgGCG‑AAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGGTTGGTTCATCCGGCACACAAACTTACAAACTTCCCg  >  2:476868/1‑140 (MQ=255)

AGAGTGGATGATTGATGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCG  >  NC_000913/4385787‑4386060

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`