| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,949,993 | (T)5→6 | coding (752/1332 nt) | argA → | N‑acetylglutamate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,949,988 | 1 | . | T | 97.5% | 418.2 / 1.6 | 118 | coding (747/1332 nt) | argA | N‑acetylglutamate synthase |
| Reads supporting (aligned to +/- strand): ref base . (1/2); new base T (62/53); total (63/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.17e-01 | |||||||||||
Only 100 of 123 total aligned reads displayed.
TTGGTTTTTGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGC‑TTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAG > NC_000913/2949858‑2950122 | ttGGTTTTTGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGC‑ttt‑tttgcg < 1:454985/140‑5 (MQ=255)ttGGTTTTTGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGC‑ttt‑tttgcg < 1:1162140/140‑5 (MQ=255) ttttGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGgcg < 1:270826/140‑1 (MQ=255) ttttGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGgcg < 2:1080651/140‑1 (MQ=255) tttGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGC‑ttt‑tttgc > 1:447136/1‑130 (MQ=255) ctctTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTg < 2:400759/140‑1 (MQ=255) aGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCt > 1:1054490/1‑140 (MQ=255) aGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTg > 2:1265181/1‑140 (MQ=255) ggCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGcc > 1:593935/1‑140 (MQ=255) gTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCa > 1:566545/1‑140 (MQ=255) gTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCa < 1:774439/140‑1 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAgc > 2:384965/1‑140 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAgc > 1:783927/1‑140 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAgc > 1:964159/1‑140 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAgc > 2:1362926/1‑140 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAgc > 2:419568/1‑140 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAgc > 2:431371/1‑140 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAgc > 2:708114/1‑140 (MQ=255) aCTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAgcg < 1:1173346/140‑1 (MQ=255) tGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGgcgtg > 2:792781/1‑140 (MQ=255) acgacgGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGgcgtgcg < 1:1362926/140‑1 (MQ=255) cgacgGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGgcgtgcgt < 2:266792/140‑1 (MQ=255) acgGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCg > 1:1104067/1‑140 (MQ=255) acgGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCg > 2:440250/1‑140 (MQ=255) acgGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCg > 2:513524/1‑140 (MQ=255) cgGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGc > 1:1033562/1‑140 (MQ=255) tGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGCGCGTCGCTGt > 1:101051/1‑140 (MQ=255) tGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGC‑TTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTc > 1:969124/1‑140 (MQ=255) tatTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCAt < 1:1060872/140‑1 (MQ=255) tctcCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAAt < 1:419568/140‑1 (MQ=255) tctcCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAAt > 2:504686/1‑140 (MQ=255) ctcCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAAt < 2:1054490/140‑1 (MQ=255) tcCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGgcgtgcgt > 1:1184743/1‑124 (MQ=255) tcCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGgcgtgcgt < 2:1184743/124‑1 (MQ=255) tcCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCa > 1:1463658/1‑140 (MQ=255) cGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGt > 1:532510/1‑140 (MQ=255) cTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATc > 2:13615/1‑140 (MQ=255) tCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGa > 1:658629/1‑140 (MQ=255) tAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGAt > 2:1074858/1‑140 (MQ=255) aagcgcaagcgcGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGC‑TTTCTTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgcgc < 2:90720/140‑1 (MQ=255) agcgcaagcgcGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgcgcg < 1:1074858/140‑1 (MQ=255) agcgcaagcgcGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgcgcg < 1:470883/140‑1 (MQ=255) gcgcaagcgcGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgcgcgc > 2:166047/1‑140 (MQ=255) cgcaagcgcGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAATGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCt < 2:1051014/140‑1 (MQ=255) cgcaagcgcGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCt < 2:377678/140‑1 (MQ=255) cgcaagcgcGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATCACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgcg < 2:1463966/136‑1 (MQ=255) cgcaagcgcGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATCACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgcg > 1:1463966/1‑136 (MQ=255) caagcgcGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGt < 2:101051/140‑1 (MQ=255) agcgcGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTg > 2:842549/1‑140 (MQ=255) gcgcGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGc < 1:576916/140‑1 (MQ=255) gcgGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCaa < 1:1342675/140‑1 (MQ=255) cgGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAag > 1:103724/1‑140 (MQ=255) ggTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGTGCGCTGTTGCAagag > 1:950944/1‑140 (MQ=255) ggTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAagag > 1:823863/1‑140 (MQ=255) ggTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAagag > 2:1211049/1‑140 (MQ=255) gTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAgt < 2:964159/140‑1 (MQ=255) tAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAgtt < 2:566545/140‑1 (MQ=255) tAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAgtt < 2:1104067/140‑1 (MQ=255) aGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAgttg < 1:1211049/140‑1 (MQ=255) aaG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAgttgtt < 1:273805/140‑1 (MQ=255) aGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCAcg > 1:226410/1‑140 (MQ=255) gAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCAcgcg > 2:208193/1‑140 (MQ=255) aaGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGa < 2:64606/140‑1 (MQ=255) aaGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGa < 1:13615/140‑1 (MQ=255) gagaAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGa < 2:1064953/138‑1 (MQ=255) gagaAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGa > 1:1064953/1‑138 (MQ=255) agaAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACgg > 1:22490/1‑140 (MQ=255) gaAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGt > 2:63821/1‑140 (MQ=255) gaAAGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGt > 1:1008206/1‑140 (MQ=255) aaaGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTa < 2:1008206/140‑1 (MQ=255) aaaGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTa > 2:1296982/1‑140 (MQ=255) aaaGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTa < 1:63821/140‑1 (MQ=255) aaaGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTa < 1:934207/140‑1 (MQ=255) aGGCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATc > 2:1060324/1‑140 (MQ=255) gCGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCgg > 1:1078778/1‑140 (MQ=255) cGATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGt > 2:340512/1‑140 (MQ=255) gATTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTa < 1:842549/140‑1 (MQ=255) aTTACAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTAc < 2:1463658/140‑1 (MQ=255) aCAACTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCa < 2:348150/140‑1 (MQ=255) aaCTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGTGCGCTGTTGCAAGAGTTGTTTTCACGCGACGGTATCGGTACGCAGa < 2:950944/140‑1 (MQ=255) aaCTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGa < 2:532510/140‑1 (MQ=255) aaCTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGa < 1:386964/140‑1 (MQ=255) aaCTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGa < 1:708114/140‑1 (MQ=255) aaCTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGa < 1:384965/140‑1 (MQ=255) cTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCa > 1:1351918/1‑136 (MQ=255) cTCCGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCa < 2:1351918/136‑1 (MQ=255) cGGTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATtgtg < 2:103724/140‑1 (MQ=255) gTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACg > 2:1363632/1‑129 (MQ=255) gTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACg < 2:913810/129‑1 (MQ=255) gTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACg > 1:913810/1‑129 (MQ=255) gTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGAt > 1:226696/1‑140 (MQ=255) gTACGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGAt > 2:823081/1‑140 (MQ=255) aCGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATgg > 1:450055/1‑140 (MQ=255) cGGTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGa > 1:396575/1‑140 (MQ=255) gTGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGaaa > 1:1405263/1‑140 (MQ=255) tGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGAt < 1:1385396/128‑1 (MQ=255) tGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAg > 2:60702/1‑140 (MQ=255) tGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAg > 2:881554/1‑140 (MQ=255) tGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAg > 2:585993/1‑140 (MQ=255) tGCGCTTTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAg > 2:106662/1‑140 (MQ=255) | TTGGTTTTTGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAG‑CCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGC‑TTT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAG > NC_000913/2949858‑2950122 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |