Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,820,592	(C)6→7	coding (579/1683 nt)	ligB ←	DNA ligase B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,820,586	1	.	C	100.0%	271.3 / NA	78	G195G (GGA→GGG)	ligB	DNA ligase B
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base C (40/38);  total (40/38)

CGGTAGCCAGCTCTTTTAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATT‑CCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGCGGAAATTAAGCTAACTTTCTGCGTCCAGTCCT  >  NC_000913/3820447‑3820716                                                                                                                                             |                                                                                                                                   cGGTAGCCAGCTCTTTTAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTAtt                                                                                                                                     >  1:921889/1‑140 (MQ=255)  ggTAGCCAGCCCTTTTAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATT‑c                                                                                                                                   >  1:1494685/1‑140 (MQ=255)     aGCCAGCTCTTTTAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATT‑cccc                                                                                                                                <  1:864687/140‑1 (MQ=255)     aGCCAGCTCTTTTAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATT‑cccc                                                                                                                                <  2:23492/140‑1 (MQ=255)          gCTCTTTTAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATT‑cccccccat                                                                                                                           <  2:921889/140‑4 (MQ=255)          gCTCTTTTAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATT‑cccccccat                                                                                                                           <  1:1290878/140‑4 (MQ=255)          gCTCTTTTAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATT‑cccccccat                                                                                                                           <  2:201906/140‑4 (MQ=255)          gCTCTTTTAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATT‑cccccccat                                                                                                                           <  2:1162652/140‑4 (MQ=255)           ctctTTTAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATT‑cccccccatt                                                                                                                          >  1:979543/1‑136 (MQ=255)                ttAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATttgttg                                                                                                                      <  1:1018154/140‑1 (MQ=255)                ttAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATttgttg                                                                                                                      >  2:276795/1‑140 (MQ=255)                ttAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATttgttg                                                                                                                      >  1:1477093/1‑140 (MQ=255)                 tAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATttgttgt                                                                                                                     <  2:1477149/140‑1 (MQ=255)                 tAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATttgttgt                                                                                                                     <  2:1048945/140‑1 (MQ=255)                 tAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATttgttgt                                                                                                                     <  2:925389/140‑1 (MQ=255)                        tCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGatat                                                                                                              >  1:112156/1‑140 (MQ=255)                        tCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGatat                                                                                                              >  1:751703/1‑140 (MQ=255)                                tAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTcg                                                                                                      <  2:888255/140‑1 (MQ=255)                                  aCTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTcgcg                                                                                                    >  2:1243485/1‑140 (MQ=255)                                  aCTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTcgcg                                                                                                    <  2:185466/140‑1 (MQ=255)                                  aCTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTcgcg                                                                                                    <  1:1350415/140‑1 (MQ=255)                                  aCTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTcgcg                                                                                                    >  1:933728/1‑140 (MQ=255)                                  aCTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTcgcg                                                                                                    >  1:386269/1‑140 (MQ=255)                                  aCTGCGGTCCATCCCGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTCGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTcgcg                                                                                                    >  2:1316792/1‑140 (MQ=255)                                   cTGCGGTCCACCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCgcgc                                                                                                   <  1:1308625/140‑1 (MQ=255)                                    tGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCt                                                                                                  >  2:1092446/1‑140 (MQ=255)                                    tGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCt                                                                                                  >  1:1449025/1‑140 (MQ=255)                                      cGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTgg                                                                                                >  1:1056729/1‑140 (MQ=255)                                      cGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTgg                                                                                                >  2:307657/1‑140 (MQ=255)                                      cGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTgg                                                                                                >  1:849388/1‑140 (MQ=255)                                      cGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTgg                                                                                                >  1:1321309/1‑140 (MQ=255)                                      cGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTgg                                                                                                <  2:1449025/140‑1 (MQ=255)                                      cGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGCCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTgg                                                                                                >  2:23762/1‑140 (MQ=255)                                        gTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGgag                                                                                              >  1:63163/1‑140 (MQ=255)                                        gTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGgag                                                                                              <  2:1288528/140‑1 (MQ=255)                                         tCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGgaga                                                                                             >  2:58091/1‑140 (MQ=255)                                         tCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGgaga                                                                                             >  1:287001/1‑140 (MQ=255)                                           cATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCgcgc                                                                                                   <  2:1362978/132‑1 (MQ=255)                                           cATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCgcgc                                                                                                   >  1:1362978/1‑132 (MQ=255)                                           cATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGaaa                                                                                           <  2:979543/140‑1 (MQ=255)                                           cATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGaaa                                                                                           >  1:1362302/1‑140 (MQ=255)                                             tCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAata                                                                                         >  2:601637/1‑140 (MQ=255)                                               cGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATAtt                                                                                       <  1:1092446/140‑1 (MQ=255)                                               cGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATAtt                                                                                       <  2:1284132/140‑1 (MQ=255)                                                   cATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTccc                                                                                   >  1:813744/1‑140 (MQ=255)                                                    aTGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTcccc                                                                                  <  1:276795/140‑1 (MQ=255)                                                    aTGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTcccc                                                                                  <  2:849388/140‑1 (MQ=255)                                                    aTGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGCCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTcccc                                                                                  <  1:23762/140‑1 (MQ=255)                                                       cccAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTg                                                                               >  2:1460398/1‑140 (MQ=255)                                                       cccAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTg                                                                               >  2:1294851/1‑140 (MQ=255)                                                         cAGACAAAAACGCCCATAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGaa                                                                             <  2:1362302/140‑1 (MQ=255)                                                            aCAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTc                                                                                     >  2:698745/1‑129 (MQ=255)                                                            aCAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTc                                                                                     <  1:698745/129‑1 (MQ=255)                                                            aCAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCg                                                                          <  2:1079969/140‑1 (MQ=255)                                                              aaaaaCGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTa                                                                        <  1:1460398/140‑1 (MQ=255)                                                              aaaaaCGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTa                                                                        <  2:813744/140‑1 (MQ=255)                                                               aaaaCGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTAc                                                                       <  1:58091/140‑1 (MQ=255)                                                                aaaCGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTcccc                                                                                  <  2:852294/128‑1 (MQ=255)                                                                aaaCGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTcccc                                                                                  >  1:852294/1‑128 (MQ=255)                                                                aaaCGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCg                                                                          >  2:256686/1‑136 (MQ=255)                                                                aaaCGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCg                                                                          <  1:256686/136‑1 (MQ=255)                                                                 aaCGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTg                                                                     <  2:386269/140‑1 (MQ=255)                                                                 aaCGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTg                                                                     <  2:1332044/140‑1 (MQ=255)                                                                              ttCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAAGTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGcc                                                        >  2:1351484/1‑140 (MQ=255)                                                                                    gtgtCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTaa                                                  >  2:923949/1‑140 (MQ=255)                                                                                      gtCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACg                                                <  1:1294851/140‑1 (MQ=255)                                                                                      gtCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACg                                                <  2:25078/140‑1 (MQ=255)                                                                                      gtCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACg                                                >  2:81582/1‑140 (MQ=255)                                                                                      gtCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACg                                                <  2:751703/140‑1 (MQ=255)                                                                                      gtCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACg                                                <  2:551214/140‑1 (MQ=255)                                                                                           tATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTg                                           >  2:1401407/1‑140 (MQ=255)                                                                                               gTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGc                                       >  2:555078/1‑140 (MQ=255)                                                                                                tCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGca                                      <  1:307657/140‑1 (MQ=255)                                                                                                tCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGca                                      <  1:555078/140‑1 (MQ=255)                                                                                                tCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGca                                      >  1:1195898/1‑140 (MQ=255)                                                                                                  cTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGcaca                                    >  1:1188878/1‑140 (MQ=255)                                                                                                        catcatCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGCGGaa                              <  2:933728/140‑1 (MQ=255)                                                                                                          tcatcaAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGCGGAAAt                            >  1:963342/1‑140 (MQ=255)                                                                                                          tcatcaAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGCGGAAAt                            >  2:1415947/1‑140 (MQ=255)                                                                                                           catcaAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGCGGAAAtt                           >  2:356220/1‑140 (MQ=255)                                                                                                           catcaAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGATGGATATGCCCCACGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGTCCCGCTAACAGTTTGCGGCACAGCGGAAAtt                           >  2:572343/1‑140 (MQ=255)                                                                                                                      cAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGCGGAAATTAAGCTAACttt                <  2:287001/140‑1 (MQ=255)                                                                                                                      cAACTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGCGGAAATTAAGCTAACttt                >  1:149810/1‑140 (MQ=255)                                                                                                                        aCTTTTGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGCGGAAATTAAGCTAACTTTCt              <  1:923949/140‑1 (MQ=255)                                                                                                                           tttGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGCGGAAATTAAGCTAACTTTCTGCg           <  1:1415947/140‑1 (MQ=255)                                                                                                                             tGCGCGGGCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGCGGAAATTAAGCTAACTTTCTGCGTc         <  1:1351484/140‑1 (MQ=255)                                                                                                                                    gCATTTATTCCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGCGGAAATTAAGCTAACTTTCTGCGTCCAGTCCt  >  1:1006805/1‑140 (MQ=255)                                                                                                                                             |                                                                                                                                   CGGTAGCCAGCTCTTTTAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATT‑CCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGCGGAAATTAAGCTAACTTTCTGCGTCCAGTCCT  >  NC_000913/3820447‑3820716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑