| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,597,313 | (C)7→8 | pseudogene (774/5422 nt) | yneO ← | AIDA‑I family autotransporter YneO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,597,306 | 1 | . | C | 97.4% | 261.3 / ‑0.4 | 77 | pseudogene (781/5422 nt) | yneO | AIDA‑I family autotransporter YneO |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base C (38/37); total (39/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.19e-01 | |||||||||||
GAAATATTGACTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑A‑CCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGCCCGCCTGATAGC > NC_000913/1597170‑1597440 | gAAATATTGACTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTaacc‑a‑a‑cc < 1:755168/139‑1 (MQ=255)gAAATATTGACTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTaacc‑a‑a‑cc > 2:755168/1‑139 (MQ=255)gAAATATTGACTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑A‑ccc > 1:1107168/1‑140 (MQ=255)gAAATATTGACTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑A‑ccc > 2:1147011/1‑140 (MQ=255) aaTATTGACTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑A‑ccccc < 2:500509/140‑1 (MQ=255) tatTGACTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑A‑ccccccc < 1:1147011/140‑1 (MQ=255) tatTGACTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑A‑ccccccc < 1:392404/140‑1 (MQ=255) atTGACTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑A‑cccccccc > 1:690818/1‑139 (MQ=255) atTGACTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑A‑CCCCCCCt > 1:686487/1‑140 (MQ=255) tGACTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑A‑cccccccctc < 1:1195971/140‑4 (MQ=255) tGACTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑A‑cccccccctc > 2:1146351/1‑137 (MQ=255) gACTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑A‑cccccccctcc > 2:674524/1‑136 (MQ=255) aCTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑A‑cccccccctcgc < 1:98988/140‑6 (MQ=255) gCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATa > 1:317451/1‑140 (MQ=255) ccATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAg > 1:890596/1‑140 (MQ=255) cATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTTCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGt > 1:196407/1‑140 (MQ=255) cATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGt < 2:357604/140‑1 (MQ=255) tACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGc > 1:794685/1‑140 (MQ=255) tACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGc < 2:170010/140‑1 (MQ=255) tACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGc < 1:1236173/140‑1 (MQ=255) ccGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCt < 2:1365754/140‑1 (MQ=255) aaaTATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTccc < 2:317451/140‑1 (MQ=255) aaaTATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTccc < 2:414008/140‑1 (MQ=255) aaaTATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTccc < 2:890596/140‑1 (MQ=255) aaaTATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTccc < 1:1049560/140‑1 (MQ=255) agTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTAc < 2:690818/140‑1 (MQ=255) agTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTAc > 1:465383/1‑140 (MQ=255) agTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTAc < 1:881389/140‑1 (MQ=255) tCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCTA‑C‑CCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCtt < 2:1341883/132‑1 (MQ=255) tCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCtt > 1:1341883/1‑132 (MQ=255) tCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCa > 2:1492025/1‑140 (MQ=255) tGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAAt > 2:368511/1‑140 (MQ=255) tGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAAt > 2:689208/1‑140 (MQ=255) tGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTGGATTACCAAt > 2:935399/1‑140 (MQ=255) gCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAAtt < 1:1043102/140‑1 (MQ=255) gTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTg < 1:862325/140‑1 (MQ=255) ccGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGaaa < 1:564974/140‑1 (MQ=255) cGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAAt > 2:341969/1‑140 (MQ=255) gatgaCAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCa > 1:1249859/1‑140 (MQ=255) tgaCAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAAt > 2:1110386/1‑140 (MQ=255) aCAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGGGAATAGCCGCCCCCCCAGTTCCTTGATTACCAATTTGAAGTCCAATTg > 2:197394/1‑140 (MQ=255) cAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGa > 1:695610/1‑140 (MQ=255) agagTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAg > 2:995577/1‑140 (MQ=255) gagTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAgg < 1:995577/140‑1 (MQ=255) ttGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCa < 1:935399/140‑1 (MQ=255) ttGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCa < 2:1107168/140‑1 (MQ=255) ttGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCa < 1:124869/140‑1 (MQ=255) gATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCatt > 2:259038/1‑140 (MQ=255) gATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCatt > 2:1367288/1‑140 (MQ=255) aTCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCatta > 2:859022/1‑140 (MQ=255) aTCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCat < 2:366592/138‑1 (MQ=255) aTCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCat > 1:366592/1‑138 (MQ=255) tGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTAtttt > 2:101004/1‑140 (MQ=255) gCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTAttttt > 1:1105440/1‑140 (MQ=255) gCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTAttttt > 1:731479/1‑140 (MQ=255) gCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTAttttt > 1:285793/1‑140 (MQ=255) aTTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTttatt < 1:1110386/140‑1 (MQ=255) tCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAg > 1:1406852/1‑140 (MQ=255) tCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAg > 2:465757/1‑140 (MQ=255) cAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGc < 1:624878/140‑1 (MQ=255) aGGGTTCCGATGCCGGTGGCATTGCCACCGATAATCGTAATTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGcc < 1:197394/140‑1 (MQ=255) aGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGcc < 2:1406852/140‑1 (MQ=255) gTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACt > 2:321151/1‑140 (MQ=255) gTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCACAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACt < 1:330718/140‑1 (MQ=255) tCCGATACCGGTGGCATTGCCCCCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCGCTCg < 2:593482/140‑1 (MQ=255) tCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCg < 1:1162302/140‑1 (MQ=255) ccGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGc > 1:173519/1‑140 (MQ=255) cGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGcc < 2:14259/140‑1 (MQ=255) tACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCAcc < 1:37137/140‑1 (MQ=255) aCCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCAccc < 2:157159/140‑1 (MQ=255) ccGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCa < 2:1208849/136‑1 (MQ=255) ccGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCa > 1:1208849/1‑136 (MQ=255) tGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTc > 1:1285502/1‑140 (MQ=255) aTTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACg > 2:321832/1‑140 (MQ=255) aTTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACg < 1:321832/140‑1 (MQ=255) tGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGAc > 2:205682/1‑140 (MQ=255) cACCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAAc < 1:321151/140‑1 (MQ=255) aCCGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAAcc > 2:1245055/1‑140 (MQ=255) cGATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTg > 1:291429/1‑140 (MQ=255) gATAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTgg < 1:1146351/140‑1 (MQ=255) aTAATCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGc < 2:731479/140‑1 (MQ=255) aTCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCAt < 2:1285502/140‑1 (MQ=255) aTCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCAt < 1:205682/140‑1 (MQ=255) tCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTgg < 1:1281494/135‑1 (MQ=255) tCGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTgg > 2:1281494/1‑135 (MQ=255) cGTATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTa > 2:584036/1‑140 (MQ=255) tATTTTCAGCCGTAACC‑ACC‑CCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAAATTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACt < 2:196407/140‑1 (MQ=255) tATTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACt > 1:1037697/1‑140 (MQ=255) aTTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACg < 1:1210280/122‑1 (MQ=255) aTTTTCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCACCACCCTTTTCAACg > 2:1210280/1‑122 (MQ=255) ttCAGCCGTAACC‑A‑ACCCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGccc < 1:341969/140‑1 (MQ=255) acc‑a‑accCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGCCCGCCTGATAGc > 1:1424173/1‑140 (MQ=255) acc‑a‑accCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGCCCGCCTGATAGc > 1:490451/1‑140 (MQ=255) | GAAATATTGACTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACC‑A‑A‑CCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGCCCGCCTGATAGC > NC_000913/1597170‑1597440 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |