BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,881,094	A→G	L350S (TTA→TCA)	casC ←	type I‑E CRISPR system Cascade subunit CasC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,881,094	0	A	G	100.0%	368.9 / NA	102	L350S (TTA→TCA)	casC	type I‑E CRISPR system Cascade subunit CasC
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (35/67); total (35/67)

Only 100 of 102 total aligned reads displayed.

TTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTAAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTAAACGCCTGTATAGACGGTTGCA  >  NC_000913/2880964‑2881229

ttCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCa                                                                                                                                <  2:794345/140‑1 (MQ=255)

ttCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCa                                                                                                                                <  2:228812/140‑1 (MQ=255)

ttCCGGTAGGCCGCGTTCTTTCAAGGGTCGGCTGCCCCCAGGCTTGCATTGGCCCGGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCa                                                                                                                                <  2:1405471/140‑1 (MQ=255)

   cGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCAttt                                                                                                                             >  1:1192457/1‑140 (MQ=255)

     gTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGt                                                                                                                           >  1:1094857/1‑140 (MQ=255)

     gTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGt                                                                                                                           >  1:1213984/1‑140 (MQ=255)

          tCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAAc                                                                                                                      <  1:79296/140‑1 (MQ=255)

           cgcgTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACt                                                                                                                     <  2:609532/140‑1 (MQ=255)

             cgTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTg                                                                                                                   >  2:1374048/1‑140 (MQ=255)

               ttCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAg                                                                                                                 <  1:945393/140‑1 (MQ=255)

               ttCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAg                                                                                                                 <  2:1261006/140‑1 (MQ=255)

               ttCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAg                                                                                                                 <  1:1350964/140‑1 (MQ=255)

               ttCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAg                                                                                                                 <  2:1362444/140‑1 (MQ=255)

               ttCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAg                                                                                                                 <  1:1398085/140‑1 (MQ=255)

               ttCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAg                                                                                                                 <  2:401893/140‑1 (MQ=255)

                 ccTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCa                                                                                                               <  1:843266/140‑1 (MQ=255)

                    tCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTg                                                                                                                   <  1:364806/133‑1 (MQ=255)

                    tCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTg                                                                                                                   >  2:364806/1‑133 (MQ=255)

                     cAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTaa                                                                                                           <  2:716027/140‑1 (MQ=255)

                       aaGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAAtt                                                                                                         <  1:734173/140‑1 (MQ=255)

                           tCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGt                                                                                                     <  2:1493495/140‑1 (MQ=255)

                           tCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGt                                                                                                     <  2:1494559/140‑1 (MQ=255)

                           tCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGt                                                                                                     <  2:1178044/140‑1 (MQ=255)

                           tCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGt                                                                                                     <  2:1094857/140‑1 (MQ=255)

                           tCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGt                                                                                                     <  2:165026/140‑1 (MQ=255)

                           tCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGt                                                                                                     <  2:974116/140‑1 (MQ=255)

                             ggCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCt                                                                                                   >  1:203865/1‑140 (MQ=255)

                               cTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTAc                                                                                                 <  2:1088874/140‑1 (MQ=255)

                                    cccAGTCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATGTGTTTAACTTGAGCAGTAATTGGGTCTACATCAg                                                                                            <  2:1343869/140‑1 (MQ=255)

                                       aGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATa                                                                                         >  2:946964/1‑140 (MQ=255)

                                            tGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGt                                                                                                     >  1:1193840/1‑123 (MQ=255)

                                            tGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGt                                                                                                     <  2:1193840/123‑1 (MQ=255)

                                            tGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTg                                                                                    <  1:1374048/140‑1 (MQ=255)

                                             gCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGa                                                                                   >  1:16517/1‑140 (MQ=255)

                                             gCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGa                                                                                   >  1:840197/1‑140 (MQ=255)

                                              cATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGaa                                                                                  >  2:357471/1‑140 (MQ=255)

                                              cATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGaa                                                                                  >  1:182699/1‑140 (MQ=255)

                                                   gCCCAGCAAGCCGCAAGATCAAATAAGGTCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTgcg                                                                             >  2:971134/1‑140 (MQ=255)

                                                   gCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGaa                                                                                  >  1:1419725/1‑135 (MQ=255)

                                                   gCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGaa                                                                                  <  2:1419725/135‑1 (MQ=255)

                                                   gCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTgcg                                                                             >  2:1287902/1‑140 (MQ=255)

                                                   gCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTgcg                                                                             >  1:1280322/1‑140 (MQ=255)

                                                      cAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCgcag                                                                          <  2:371214/140‑1 (MQ=255)

                                                      cAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCgcag                                                                          <  2:900881/140‑1 (MQ=255)

                                                         cAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGcagcag                                                                       >  1:791028/1‑140 (MQ=255)

                                                           aGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCt                                                                     <  2:203865/140‑1 (MQ=255)

                                                           aGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCt                                                                     <  1:468831/140‑1 (MQ=255)

                                                           aGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCt                                                                     <  1:1518909/140‑1 (MQ=255)

                                                           aGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCt                                                                     <  2:1467362/140‑1 (MQ=255)

                                                           aGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCt                                                                     <  1:217992/140‑1 (MQ=255)

                                                           aGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCt                                                                     <  1:263582/140‑1 (MQ=255)

                                                           aGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCt                                                                     <  2:791028/140‑1 (MQ=255)

                                                           aGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCt                                                                     <  1:991385/140‑1 (MQ=255)

                                                             ccGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTcc                                                                   >  1:791264/1‑140 (MQ=255)

                                                             ccGCAAGATCAAATAAGATCTCATGCTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTcc                                                                   >  1:1450629/1‑140 (MQ=255)

                                                                 aaGATCAAATAAGATCTCATGTTCACGCCACGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTc                                                               <  1:889598/140‑1 (MQ=255)

                                                                  aGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCa                                                              <  2:964744/140‑1 (MQ=255)

                                                                     tCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGAc                                                           <  2:203829/140‑1 (MQ=255)

                                                                      cAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGAcc                                                          >  1:15478/1‑140 (MQ=255)

                                                                       aaaTAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCa                                                         <  2:552636/140‑1 (MQ=255)

                                                                         aTAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCata                                                       <  2:479252/140‑1 (MQ=255)

                                                                               tctcATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAGCTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCAtt                                                 >  2:1412257/1‑140 (MQ=255)

                                                                               tctcATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCAtt                                                 >  2:135170/1‑140 (MQ=255)

                                                                               tctcATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCAtt                                                 >  2:1297044/1‑140 (MQ=255)

                                                                                ctcATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTg                                                >  2:759619/1‑140 (MQ=255)

                                                                                 tcATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTgg                                               <  2:1213984/140‑1 (MQ=255)

                                                                                  cATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGc                                              <  1:1206067/140‑1 (MQ=255)

                                                                                       tCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAAcgc                                         <  2:805359/140‑1 (MQ=255)

                                                                                       tCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAAcgc                                         <  2:15478/140‑1 (MQ=255)

                                                                                       tCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAAcgc                                         <  1:63023/140‑1 (MQ=255)

                                                                                       tCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAAcgc                                         <  2:182699/140‑1 (MQ=255)

                                                                                           gCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGTAAcgc                                         >  1:903715/1‑136 (MQ=255)

                                                                                           gCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGTAAcgc                                         <  2:903715/136‑1 (MQ=255)

                                                                                           gCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAAcgc                                         >  1:113927/1‑136 (MQ=255)

                                                                                           gCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATc                                     >  1:1150936/1‑140 (MQ=255)

                                                                                           gCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATc                                     >  1:43064/1‑140 (MQ=255)

                                                                                            ccTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATcc                                    <  2:1280322/140‑1 (MQ=255)

                                                                                              tCGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCa                                  >  1:1285977/1‑140 (MQ=255)

                                                                                               cGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCaa                                 >  1:353420/1‑140 (MQ=255)

                                                                                               cGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAAGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAAcgc                                         <  1:105223/132‑1 (MQ=255)

                                                                                               cGCCATTATTACGAACCCAGGATTTTAACTGTTCTGAAGTAAGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAAcgc                                         >  2:105223/1‑132 (MQ=255)

                                                                                                        taCGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTa                        <  1:1505075/140‑1 (MQ=255)

                                                                                                        taCGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTa                        <  1:1296114/140‑1 (MQ=255)

                                                                                                        taCGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTa                        <  2:1119733/140‑1 (MQ=255)

                                                                                                          cGAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTaaa                      <  1:1287902/140‑1 (MQ=255)

                                                                                                           gAACCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTAAAc                     <  2:840197/140‑1 (MQ=255)

                                                                                                            aaCCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTAAACg                    <  2:1285977/140‑1 (MQ=255)

                                                                                                             aCCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTAAACGc                   <  2:16517/140‑1 (MQ=255)

                                                                                                             aCCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTAAACGc                   <  1:759619/140‑1 (MQ=255)

                                                                                                             aCCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTAAACGc                   <  2:750932/140‑1 (MQ=255)

                                                                                                             aCCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTAAACGc                   <  1:971134/140‑1 (MQ=255)

                                                                                                             aCCCAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTAAACGc                   <  1:946964/140‑1 (MQ=255)

                                                                                                              cccAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTAAACGcc                  <  2:43064/140‑1 (MQ=255)

                                                                                                              cccAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTAAACGcc                  <  2:1150936/140‑1 (MQ=255)

                                                                                                               ccAGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTAAACGCCt                 <  2:1413088/140‑1 (MQ=255)

                                                                                                                 aGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTa                        <  1:527060/131‑1 (MQ=255)

                                                                                                                 aGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTa                        >  2:527060/1‑131 (MQ=255)

                                                                                                                 aGGATTTTAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTAAACGCCTGt               >  2:157710/1‑140 (MQ=255)

                                                                                                                       ttAACTGTTCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTAAACGCCTGTATAGAc         >  1:480008/1‑140 (MQ=255)

                                                                                                                              ttCTGAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTAAACGCCTGTATAGACGGTTGCa  >  1:788348/1‑140 (MQ=255)

TTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGATCAAATAAGATCTCATGTTCACGCCTCGCCATTATTACGAACCCAGGATTTTAACTGTTCTAAAGTAGGCATTTGTTTAACTTGAGCAGTAATTGGGTCTACATCAGATAAGCTGAATTGCGCAGCAGCTCCGTTCAGACCATATCCATTGGCAACGCGATCCCAATATTGATTAAACGCCTGTATAGACGGTTGCA  >  NC_000913/2880964‑2881229

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`