| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,548,840 | G→A | Q411* (CAG→TAG) | malQ ← | 4‑alpha‑glucanotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,548,840 | 0 | G | A | 99.0% | 293.2 / ‑6.1 | 102 | Q411* (CAG→TAG) | malQ | 4‑alpha‑glucanotransferase |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (42/59); total (42/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
CAAACGCAGCATCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCA > NC_000913/3548703‑3548976 | caAACGCAGCATCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTAcc > 1:116318/1‑140 (MQ=255) aaaCGCAGCATCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTAccc > 2:333526/1‑140 (MQ=255) aaaCGCAGCATCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTAccc > 1:26300/1‑140 (MQ=255) aaaCGCAGCATCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTAccc > 1:224201/1‑140 (MQ=255) aaaCGCAGCATCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTAccc > 1:217325/1‑140 (MQ=255) aaaCGCAGCATCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTAccc > 2:1241129/1‑140 (MQ=255) aaaCGCAGCATCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTAccc > 2:1128105/1‑140 (MQ=255) aaaCGCAGCATCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTAccc > 2:471431/1‑140 (MQ=255) cGCAGCATCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCaa < 1:428228/140‑1 (MQ=255) cGCAGCATCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCaa < 1:1397187/140‑1 (MQ=255) gcaTCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACggg < 2:353350/140‑1 (MQ=255) caTCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGc < 1:680660/140‑1 (MQ=255) caTCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGc < 2:54690/140‑1 (MQ=255) tCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCg < 2:116318/140‑1 (MQ=255) acaTGGTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATc < 2:1185754/140‑1 (MQ=255) acaTGGTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATc > 2:1137469/1‑140 (MQ=255) gTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAATCGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGCTTTACCCCAACCGGCCGCGGAAATCcggcg > 1:1473748/1‑140 (MQ=255) gTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCcggcg < 1:1330460/140‑1 (MQ=255) tCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCcggcgg < 2:224201/140‑1 (MQ=255) tCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCcggcgc > 1:963711/1‑139 (MQ=255) tCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTCCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAAACCCCCATTCTACCCCAAAGGGCCCAGGATATTcggcgg > 1:846881/1‑140 (MQ=255) cAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGATTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCggcggc > 2:182936/1‑140 (MQ=255) aTTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGgcgc > 1:786588/1‑140 (MQ=255) aTTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGgcgc > 1:1371408/1‑140 (MQ=255) aaTGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAAc < 2:1371408/140‑1 (MQ=255) aaTGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAAc < 2:786588/140‑1 (MQ=255) gcgcCGCAGTTTTGCATATTGGCACGCAACAGCTCGATATACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGa < 1:1374124/140‑1 (MQ=255) gcgcCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGa < 2:154834/140‑1 (MQ=255) gcgcCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGa < 2:1478712/140‑1 (MQ=255) gcgcCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGa < 1:348519/140‑1 (MQ=255) gcgcCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGa < 2:217325/140‑1 (MQ=255) gcgcCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAAGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGa < 1:980998/140‑1 (MQ=255) ccgcAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGc > 2:939760/1‑140 (MQ=255) gcAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCtt < 2:1222466/140‑1 (MQ=255) gcAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCtt < 2:1096270/140‑1 (MQ=255) cAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCttt < 1:416341/140‑1 (MQ=255) cAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCttt > 2:416341/1‑140 (MQ=255) cAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCttt < 2:651872/140‑1 (MQ=255) cAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCttt < 1:1137469/140‑1 (MQ=255) aGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTc < 1:183511/140‑1 (MQ=255) aGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTc < 1:1241129/140‑1 (MQ=255) tttGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAgg < 2:1242205/140‑1 (MQ=255) tttGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAgg < 2:334324/140‑1 (MQ=255) tttGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAgg < 2:563554/140‑1 (MQ=255) tttGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAgg < 1:1128105/140‑1 (MQ=255) tttGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAgg < 1:958952/140‑1 (MQ=255) tGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCa < 2:1453434/140‑1 (MQ=255) cATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAat < 1:1386901/140‑1 (MQ=255) atatTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAata < 1:393130/140‑1 (MQ=255) tatTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCACTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAatat < 1:471431/140‑1 (MQ=255) tGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGt > 2:1311045/1‑140 (MQ=255) tGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGt > 1:135388/1‑140 (MQ=255) tGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGt > 1:1394605/1‑140 (MQ=255) gCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTc > 1:164474/1‑140 (MQ=255) cAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGt < 2:238641/140‑1 (MQ=255) cAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGt < 2:1298902/140‑1 (MQ=255) cAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTcac > 2:969205/1‑140 (MQ=255) gCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCacac > 1:1233767/1‑140 (MQ=255) tAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGtt > 1:897270/1‑140 (MQ=255) aCGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTcc < 1:200445/140‑1 (MQ=255) cATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCACCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGccccc > 2:907681/1‑139 (MQ=255) cgcgcgGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGccc > 1:1475829/1‑130 (MQ=255) cgcgcgGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGccc < 2:1475829/130‑1 (MQ=255) cgcgcgGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGc > 2:1449416/1‑140 (MQ=255) cgcgcgGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGc > 2:1438872/1‑140 (MQ=255) cgcgcgGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGc > 2:1305908/1‑140 (MQ=255) cgcgGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTa < 1:1391912/140‑1 (MQ=255) cgcgGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTa > 2:979217/1‑140 (MQ=255) gTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGcc < 1:1438872/140‑1 (MQ=255) gTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGcc < 1:1305908/140‑1 (MQ=255) gTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGcc < 1:319113/140‑1 (MQ=255) tgatgaTATGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCa < 2:310829/140‑1 (MQ=255) atatGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGc < 1:1324227/140‑1 (MQ=255) atGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCa < 1:1449416/140‑1 (MQ=255) atGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCa < 2:897270/140‑1 (MQ=255) atGCGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCa < 1:182936/140‑1 (MQ=255) cGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCAGAt < 1:333526/140‑1 (MQ=255) cGGGTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACCCCAACCGCCAGAt > 2:690958/1‑140 (MQ=255) ggTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCTGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGcc < 2:1319044/127‑1 (MQ=255) ggTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCCCCTTCCGCTACGCCAACCGCCAGATCa > 2:551985/1‑140 (MQ=255) ggTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGcc > 1:1319044/1‑127 (MQ=255) ggTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCAGATCa < 2:833977/140‑1 (MQ=255) ggTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCAGATCa < 1:1166250/140‑1 (MQ=255) ggTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCAGATCa < 1:1486481/140‑1 (MQ=255) ggTCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCAGATCa > 1:981365/1‑140 (MQ=255) tCCATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCAGAt < 2:214967/136‑1 (MQ=255) ccATTGGCGGTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCAGATCACGa > 2:220087/1‑140 (MQ=255) ggTAATCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCAGATCACGATACAAGcc < 2:164474/140‑1 (MQ=255) gTAACCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTCCACGGTCACACCAGGTTTCCGCCCCCCCTTCCGCTACGCCAACCGCCAGATCACGATACAAGCCa < 2:1394605/140‑1 (MQ=255) aaTCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCACCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCCCCTTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAAt < 1:907681/140‑1 (MQ=255) aaTCCCCACTTCTGCCCAAACGGCCCGAGGATATCCGGCGGCCCGCCACCCGATGATTTCAGGCAATATAGTTCACGGTCACCCCAGGTTTCCCCCCCCCCTCCCCCTACGCCAACCGCCAGATCACGATACAAGCCAAt < 2:963711/140‑1 (MQ=255) aTCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATc > 2:1178972/1‑140 (MQ=255) tCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAAt < 2:615446/138‑1 (MQ=255) tCCCCAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAAt > 1:615446/1‑138 (MQ=255) ccccAGTTCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCgg < 1:1178972/140‑1 (MQ=255) ttCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTc > 2:1285144/1‑140 (MQ=255) tctcCCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGCTGCTTTCAGGCAATATAGTTCACGGTCACACCTGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCa < 2:1412582/140‑1 (MQ=255) tctcCCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCa < 1:171239/140‑1 (MQ=255) tCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCa < 1:1285144/140‑1 (MQ=255) tCTACCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCa < 1:1008026/140‑1 (MQ=255) | CAAACGCAGCATCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATATTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGGTGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAACGGGCCGAGGATATCCGGCGGCGCGCCAACCGATGCTTTCAGGCAATATAGTTCACGGTCACACCAGGTTTCCGCCCCACCTTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCA > NC_000913/3548703‑3548976 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |