Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,806,651	T→C	K139K (AAA→AAG)	waaG ←	lipopolysaccharide glucosyltransferase I

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,806,651	0	T	C	100.0%	272.4 / NA	77	K139K (AAA→AAG)	waaG	lipopolysaccharide glucosyltransferase I
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (41/36);  total (41/36)

TTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTTCTCGGCGTAACAAACATCAGCGGCAAAATAAACA  >  NC_000913/3806515‑3806786                                                                                                                                          |                                                                                                                                        tttCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTtc                                                                                                                                      <  1:136116/140‑1 (MQ=255)  ttCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTtcg                                                                                                                                     <  2:1486531/140‑1 (MQ=255)  ttCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTtcg                                                                                                                                     <  1:367909/140‑1 (MQ=255)  ttCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTtcg                                                                                                                                     <  1:1421163/140‑1 (MQ=255)  ttCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTtcg                                                                                                                                     <  1:124083/140‑1 (MQ=255)  ttCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTtcg                                                                                                                                     <  1:226062/140‑1 (MQ=255)            tttGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTAcc                                                                                                                           >  2:1223516/1‑140 (MQ=255)            tttGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAAGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTAcc                                                                                                                           <  1:457303/140‑1 (MQ=255)             ttGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGGTAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTAccc                                                                                                                          <  2:284608/140‑1 (MQ=255)                   tttGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCg                                                                                                                    <  1:648046/140‑1 (MQ=255)                       cTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAg                                                                                                                >  2:979878/1‑140 (MQ=255)                          aCTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGtcg                                                                                                             >  2:931135/1‑140 (MQ=255)                           cTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGtcgc                                                                                                            >  2:1439674/1‑140 (MQ=255)                           cTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGtcgc                                                                                                            >  1:544281/1‑140 (MQ=255)                            tttATTTTCTGTCCGGGTTAATGCCCGGAGGAAGAATTTGTAAAAGGTTAAGTTTAAGTTT‑AAAATGGTTCTGGAAAACCGCGGTTTTCCTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGtcgct                                                                                                           <  2:929583/138‑1 (MQ=255)                                    cTGTCAGGATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCaaa                                                                                                   <  1:1402172/140‑1 (MQ=255)                                      gTCCGGATAAATACCGGGAGGAAGAATTCG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATg                                                                                                 >  2:146757/1‑140 (MQ=255)                                        ccGGATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGTATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCg                                                                                               >  1:968364/1‑140 (MQ=255)                                        ccGGATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCg                                                                                               >  1:338866/1‑140 (MQ=255)                                         cGGATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTGTCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCgg                                                                                              <  2:902378/140‑1 (MQ=255)                                          ggATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGc                                                                                             <  2:1067614/140‑1 (MQ=255)                                                 tACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGGTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATgg                                                                                      >  2:1379823/1‑140 (MQ=255)                                                 tACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATgg                                                                                      <  1:443103/140‑1 (MQ=255)                                                    cGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGa                                                                                   <  1:1193337/140‑1 (MQ=255)                                                     gggAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGat                                                                                  >  2:930314/1‑140 (MQ=255)                                                      ggaggaAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATgg                                                                                      >  2:1308116/1‑135 (MQ=255)                                                      ggaggaAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATgg                                                                                      <  1:1308116/135‑1 (MQ=255)                                                      ggaggaAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGata                                                                                 >  2:682102/1‑140 (MQ=255)                                                      ggaggaAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGata                                                                                 >  2:1246084/1‑140 (MQ=255)                                                      ggaggaAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGata                                                                                 >  2:651069/1‑140 (MQ=255)                                                      ggaggaAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGata                                                                                 >  2:477068/1‑140 (MQ=255)                                                      ggaggaAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGata                                                                                 >  2:1156686/1‑140 (MQ=255)                                                      ggaggaAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGata                                                                                 >  1:903752/1‑140 (MQ=255)                                                      ggaggaAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGata                                                                                 >  2:924416/1‑140 (MQ=255)                                                        aggaAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATc                                                                               >  1:1404478/1‑140 (MQ=255)                                                         ggaAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCg                                                                              <  1:1223516/140‑1 (MQ=255)                                                         ggaAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCg                                                                              <  1:1156686/140‑1 (MQ=255)                                                         ggaAGAATTCG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCg                                                                              <  1:146757/140‑1 (MQ=255)                                                          gaagaaTTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGt                                                                             <  2:871726/140‑1 (MQ=255)                                                           aagaaTTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATc                                                                               <  1:421677/137‑1 (MQ=255)                                                           aagaaTTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATc                                                                               >  2:421677/1‑137 (MQ=255)                                                           aagaaTTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTg                                                                            <  2:903752/140‑1 (MQ=255)                                                           aagaaTTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTg                                                                            >  2:1171587/1‑140 (MQ=255)                                                                 ttG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTa                                                                      <  2:338866/140‑1 (MQ=255)                                                                 ttG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTa                                                                      <  1:1294639/140‑1 (MQ=255)                                                                   g‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTTATGTTaaa                                                                    <  1:930314/140‑1 (MQ=255)                                                                   g‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTaaa                                                                    <  1:924416/140‑1 (MQ=255)                                                                      aaaCGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACg                                                                  <  1:390173/140‑1 (MQ=255)                                                                         cGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGata                                                               >  2:1515065/1‑140 (MQ=255)                                                                              aggttcagTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATaaaa                                                          <  1:1171587/140‑1 (MQ=255)                                                                                    agTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCtt                                                    >  1:1071111/1‑140 (MQ=255)                                                                                          aTAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCtt                                              >  2:144799/1‑140 (MQ=255)                                                                                           tAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTg                                             >  2:1320252/1‑140 (MQ=255)                                                                                              tGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTgcgc                                          >  1:102578/1‑140 (MQ=255)                                                                                              tGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTgcgc                                          <  1:1246084/140‑1 (MQ=255)                                                                                              tGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTgcgc                                          >  1:589085/1‑140 (MQ=255)                                                                                               gCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCa                                         >  2:704190/1‑140 (MQ=255)                                                                                                cTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCaa                                        >  1:852825/1‑140 (MQ=255)                                                                                                      gAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTtct                                  <  2:1071111/140‑1 (MQ=255)                                                                                                      gAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTtct                                  <  1:144799/140‑1 (MQ=255)                                                                                                        aaTCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTTCTCg                                <  1:443967/140‑1 (MQ=255)                                                                                                         aTCGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTTCTCgg                               >  1:489974/1‑140 (MQ=255)                                                                                                           cGGCGATTTGCTTATCGGTCAGCATCATAAGCTTGGCCGATTTACCCTGCTCCAAAGTCGCTCGCCCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTTCTCGGCg                             >  1:247161/1‑140 (MQ=255)                                                                                                           cGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTTCTCGGCg                             <  1:979878/140‑1 (MQ=255)                                                                                                           cGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTTCTCGGCg                             >  2:1473421/1‑140 (MQ=255)                                                                                                           cGGCGATTTGCTTATCGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTTCTCGGCg                             >  1:356180/1‑140 (MQ=255)                                                                                                                          cGGTCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTTCTCGGCGTAACAAACATCAGCg              <  1:1473421/140‑1 (MQ=255)                                                                                                                             tCAGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTTCTCGGCGTAACAAACATCAGCGGCa           <  1:724676/140‑1 (MQ=255)                                                                                                                               aGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTTCTCGGCGTAACAAACATCAGCGGCaaa         >  2:214497/1‑140 (MQ=255)                                                                                                                               aGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTTCTCGGCGTAACAAACATCAGCGGCaaa         <  2:720736/140‑1 (MQ=255)                                                                                                                               aGCATCATAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTTCTCGGCGTAACAAACATCAGCGGCaaa         >  1:724502/1‑140 (MQ=255)                                                                                                                                      tAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTTCTCGGCGTAACAAACATCAGCGGCAAAATAAACa  >  2:840055/1‑140 (MQ=255)                                                                                                                                      tAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTTCTCGGCGTAACAAACATCAGCGGCAAAATAAACa  >  1:185352/1‑140 (MQ=255)                                                                                                                                      tAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTTCTCGGCGTAACAAACATCAGCGGCAAAATAAACa  >  1:534650/1‑140 (MQ=255)                                                                                                                                      tAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTTCTCGGCGTAACAAACATCAGCGGCAAAATAAACa  >  1:1351273/1‑140 (MQ=255)                                                                                                                                      tAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTTCTCGGCGTAACAAACATCAGCGGCAAAATAAACa  >  1:588687/1‑140 (MQ=255)                                                                                                                                      tAAGCTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTTCTCGGCGTAACAAACATCAGCGGCAAAATAAACa  >  1:691231/1‑140 (MQ=255)                                                                                                                                          |                                                                                                                                        TTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTG‑AAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAATGCGGCATAATGGCGATATCGTGATGTTAAACGATATAAAAAACCTTTTTCTTGCGCAACTTTCTCGGCGTAACAAACATCAGCGGCAAAATAAACA  >  NC_000913/3806515‑3806786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑