| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 683,597 | A→G | G272G (GGT→GGC) | rihA ← | pyrimidine‑specific ribonucleoside hydrolase RihA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 683,597 | 0 | A | G | 98.2% | 386.1 / ‑2.1 | 110 | G272G (GGT→GGC) | rihA | pyrimidine‑specific ribonucleoside hydrolase RihA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (51/57); minor base T (1/1); total (52/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.17e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
TAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATACCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATGGGTCATGCAGTGGTGCGCCGACAAAGCCCCATTTTTCGTCTTTA > NC_000913/683461‑683732 | tAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAGATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGccc < 1:1185227/140‑1 (MQ=255) aaTCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCt < 1:1347111/140‑1 (MQ=255) aTCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTg > 2:559963/1‑140 (MQ=255) tCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGcc > 2:1248612/1‑136 (MQ=255) tCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGcc < 1:1248612/136‑1 (MQ=255) cAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTggg < 1:115355/140‑1 (MQ=255) cAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTggg < 2:1309870/140‑1 (MQ=255) aTGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGta > 2:537272/1‑140 (MQ=255) aTGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACAACGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGta < 2:237429/140‑1 (MQ=255) tGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATTCCCTGGGtat > 2:454984/1‑140 (MQ=255) tGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTggg < 2:945666/137‑1 (MQ=255) tGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTggg > 1:945666/1‑137 (MQ=255) tGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTg < 1:449929/135‑1 (MQ=255) tGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTg > 2:449929/1‑135 (MQ=255) tGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGtat > 1:113164/1‑140 (MQ=255) tGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGtat > 1:57969/1‑140 (MQ=255) aCGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTatat < 1:559963/140‑1 (MQ=255) aCGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTatat > 2:1236699/1‑140 (MQ=255) gtgtgtTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGtata > 1:685577/1‑137 (MQ=255) tgtgtTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTc > 2:199469/1‑140 (MQ=255) tgtgtTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTc < 1:430893/140‑1 (MQ=255) gtgtTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTcc < 1:537272/140‑1 (MQ=255) tgtTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTccc < 1:157262/140‑1 (MQ=255) tgtTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTccc < 1:1067941/140‑1 (MQ=255) tgtTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTccc > 2:157262/1‑140 (MQ=255) aaGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCtgt < 1:1516988/140‑1 (MQ=255) aaGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCtgt < 1:778802/140‑1 (MQ=255) aGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAAT‑ATCAACAACCGTCATGCCCTGGGTATATTTCCCCTgtgt > 2:944283/1‑140 (MQ=255) gTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGttt > 2:910760/1‑140 (MQ=255) tAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTc > 1:155407/1‑140 (MQ=255) tAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTc > 1:786503/1‑140 (MQ=255) tAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTc < 2:327838/140‑1 (MQ=255) aaaaTTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTcc > 2:1484694/1‑140 (MQ=255) aaaaTTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTcc > 1:1464347/1‑140 (MQ=255) aaaTTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCa > 1:541666/1‑140 (MQ=255) cAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCaa > 1:1093659/1‑140 (MQ=255) gACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGTCCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAAcc < 1:1116345/140‑1 (MQ=255) gACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAAcc < 1:1484694/140‑1 (MQ=255) cGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCa < 2:1464347/140‑1 (MQ=255) cGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCa < 1:280385/140‑1 (MQ=255) tCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAgcg < 2:1500927/140‑1 (MQ=255) gCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTc < 1:193621/140‑1 (MQ=255) cAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCaa < 2:224776/140‑1 (MQ=255) cAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCaa < 1:408630/140‑1 (MQ=255) cAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCaa < 1:1235862/140‑1 (MQ=255) aGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAAc > 2:1127154/1‑140 (MQ=255) gTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACa < 2:113164/140‑1 (MQ=255) tAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACag < 2:1450964/140‑1 (MQ=255) aaTCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACagag < 2:1093659/140‑1 (MQ=255) aacaaAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCa > 2:184001/1‑123 (MQ=255) aacaaAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCa < 1:184001/123‑1 (MQ=255) aacaaAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTaa > 1:986734/1‑140 (MQ=255) aGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAAc > 1:896285/1‑140 (MQ=255) aTCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCa < 1:1127154/140‑1 (MQ=255) tCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCaa < 1:412847/140‑1 (MQ=255) aCATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAg < 2:724766/140‑1 (MQ=255) tCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCa > 1:1379584/1‑140 (MQ=255) tCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCa > 2:818401/1‑140 (MQ=255) aCCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGc > 2:541343/1‑140 (MQ=255) aCCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGc > 1:7513/1‑140 (MQ=255) ccATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCg > 2:1332001/1‑140 (MQ=255) cATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATTCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGa < 1:454984/140‑1 (MQ=255) cATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGa < 2:1458434/140‑1 (MQ=255) cATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGa < 2:7513/140‑1 (MQ=255) cATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGa < 1:1096891/140‑1 (MQ=255) cATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGa < 1:607727/140‑1 (MQ=255) cATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGa < 1:949126/140‑1 (MQ=255) cATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGa < 2:1119308/140‑1 (MQ=255) aTTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGAt < 1:409341/140‑1 (MQ=255) aTTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGAt < 2:541666/140‑1 (MQ=255) aTTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGAt < 2:155407/140‑1 (MQ=255) tACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGa > 1:160248/1‑137 (MQ=255) tACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGa < 2:160248/137‑1 (MQ=255) tACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATgg > 2:355158/1‑140 (MQ=255) ggTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGc < 1:153394/140‑1 (MQ=255) tGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGa > 2:1339946/1‑132 (MQ=255) tGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGa < 1:1339946/132‑1 (MQ=255) tGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCAt > 1:53382/1‑140 (MQ=255) cATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATggg < 1:541343/140‑1 (MQ=255) cATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATggg < 2:786503/140‑1 (MQ=255) cATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATggg < 2:896285/140‑1 (MQ=255) ttCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCa < 2:743406/134‑1 (MQ=255) ttCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATGGGTc < 1:355158/140‑1 (MQ=255) ttCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGAAGGTGCATGGGTc > 1:843889/1‑140 (MQ=255) tttATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATGGGTCATGCa > 1:1464203/1‑140 (MQ=255) tATTGCCTGTCAGATAATAATAATCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATGGGTCATGCAgt > 1:1449850/1‑140 (MQ=255) tCAACAACCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATGGGTCATGCAGTGGTGCGCCGACAAAGCCCCAttt > 2:1226013/1‑140 (MQ=255) caacaaCCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATGGGTCATGCAGTGGTGCGCCGACAAAGCCCCAtttt < 2:1379584/140‑1 (MQ=255) aacaacCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATGGGTCATGCAGTGGTGCGCCGACAAAGCCCCAttttt > 1:592294/1‑140 (MQ=255) aacaacCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATGGGTCATGCAGTGGTGCGCCGACAAAGCCCCAttttt > 1:1422676/1‑140 (MQ=255) caacCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATGGGTCATGCAGTGGTGCGCCGACAAAGCCCCATTTTTCg < 1:1556/140‑1 (MQ=255) caacCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATGGGTCATGCAGTGGTGCGCAGACAAAGCCCCATTTTTCg < 2:326196/140‑1 (MQ=255) caacCGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGGAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATGGGTCATGCAGTGGTGCGCCGACAAAGCCCCATTTTTCg > 2:452305/1‑140 (MQ=255) ccGTCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATGGGTCATGCAGTGGTGCGCCGACAAAGCCCCATTTTTCGTCt > 2:1387189/1‑140 (MQ=255) tCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATGGGTCATGCAGTGGTGCGCCGACAAAGCCCCATTTTTCg < 2:242523/134‑1 (MQ=255) tCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATGGGTCATGCAGTGGTGCGCCGACAAAGCCCCATTTTTCg > 2:1324798/1‑134 (MQ=255) tCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATGGGTCATGCAGTGGTGCGCCGACAAAGCCCCATTTTTCg > 1:242523/1‑134 (MQ=255) tCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATGGGTCATGCAGTGGTGCGCCGACAAAGCCCCATTTTTCg < 1:1324798/134‑1 (MQ=255) tCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATGGGTCATGCAGTGGTGCGCCGACAAAGCCCCATTTTTCGTCTTTa > 2:559676/1‑140 (MQ=255) tCATGCCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATGGGTCATGCAGTGGTGCGCCGACAAAGCCCCATTTTTCGTCTTTa > 1:1362168/1‑140 (MQ=255) | TAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATTCGGTTTATTGCCTGTCAGATAATAATAATCAACAACCGTCATACCCTGGGTATATTTCCCCTGTGTTTCCACGCCAACCCAGCGCTCAACAGAGGTAAATAACTCCGGTTTCAACAGCCAGGCGATGGTGCATGGGTCATGCAGTGGTGCGCCGACAAAGCCCCATTTTTCGTCTTTA > NC_000913/683461‑683732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |