BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,061,528	A→G	D758G (GAC→GGC)	torA →	trimethylamine N‑oxide reductase 1

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,061,528	0	A	G	100.0%	424.2 / NA	118	D758G (GAC→GGC)	torA	trimethylamine N‑oxide reductase 1
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (65/53); total (65/53)

Only 100 of 119 total aligned reads displayed.

CAGCAATATACGGTAGCGGGTAAAGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGACCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATCGACATCGGTACATCGCAGCTGGCG  >  NC_000913/1061392‑1061664

cAGCAATATACGGTAGCGGGTAAAGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCg                                                                                                                                       <  2:387189/140‑1 (MQ=255)

  gCAATATACGGTAGCGGGTAAAGAGCCAGTATTCATTAACCCGCAGGATGTCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCt                                                                                                                                     <  2:80826/140‑1 (MQ=255)

   cAATATACGGTAGCGGGTAAAGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTa                                                                                                                                    <  1:1100934/140‑1 (MQ=255)

             tAGCGGGTAAAGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGc                                                                                                                          >  1:871433/1‑140 (MQ=255)

             tAGCGGGTAAAGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGc                                                                                                                          >  1:194393/1‑140 (MQ=255)

                cGGGTAAAGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTg                                                                                                                       >  1:1146822/1‑140 (MQ=255)

                cGGGTAAAGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTg                                                                                                                       >  2:634204/1‑140 (MQ=255)

                cGGGTAAAGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTg                                                                                                                       >  2:336730/1‑140 (MQ=255)

                cGGGTAAAGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTg                                                                                                                       >  2:1180924/1‑140 (MQ=255)

                  gggcaaGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGc                                                                                                                     >  2:1136371/5‑140 (MQ=255)

                  ggTAAAGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGc                                                                                                                     >  1:429797/1‑140 (MQ=255)

                  ggTAAAGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGc                                                                                                                     <  1:825739/140‑1 (MQ=255)

                  ggTAAAGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGc                                                                                                                     <  2:429797/140‑1 (MQ=255)

                  ggTAAAGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGc                                                                                                                     >  1:1282087/1‑140 (MQ=255)

                  ggTAAAGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGc                                                                                                                     >  1:1057654/1‑140 (MQ=255)

                  ggTAAAGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGc                                                                                                                     >  1:929603/1‑140 (MQ=255)

                    tAAAGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCAc                                                                                                                   <  2:51765/140‑1 (MQ=255)

                     aaaGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACg                                                                                                                  >  2:1227193/1‑140 (MQ=255)

                         agCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAAtt                                                                                                              >  1:699530/1‑140 (MQ=255)

                         agCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGGATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAAtt                                                                                                              >  2:1372338/1‑140 (MQ=255)

                          gCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTc                                                                                                             <  1:1180924/140‑1 (MQ=255)

                          gCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTc                                                                                                             <  1:336730/140‑1 (MQ=255)

                           ccAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCa                                                                                                            >  1:1486086/1‑140 (MQ=255)

                            cAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCAc                                                                                                                   <  2:1189152/132‑1 (MQ=255)

                             aGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTTGCACGAATTCACg                                                                                                          <  2:242568/140‑1 (MQ=255)

                             aGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACg                                                                                                          <  2:1299311/140‑1 (MQ=255)

                             aGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACg                                                                                                          >  2:520129/1‑140 (MQ=255)

                               tATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACTaa                                                                                                        <  2:1101324/140‑1 (MQ=255)

                               tATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGaa                                                                                                        <  1:520129/140‑1 (MQ=255)

                                   cATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGaa                                                                                                        <  1:1493446/136‑1 (MQ=255)

                                   cATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGaa                                                                                                        >  2:1493446/1‑136 (MQ=255)

                                   cATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAgggg                                                                                                    <  1:86436/140‑1 (MQ=255)

                                         cccGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGaa                                                                                                        <  2:290324/130‑1 (MQ=255)

                                         cccGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGaa                                                                                                        >  1:290324/1‑130 (MQ=255)

                                         cccGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGt                                                                                              >  1:328412/1‑140 (MQ=255)

                                         cccGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGt                                                                                              <  1:448937/140‑1 (MQ=255)

                                         cccGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGt                                                                                              >  1:1153048/1‑140 (MQ=255)

                                          ccGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTa                                                                                             <  2:966867/140‑1 (MQ=255)

                                          ccGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTa                                                                                             <  2:555437/140‑1 (MQ=255)

                                          ccGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTa                                                                                             <  1:1136371/140‑1 (MQ=255)

                                           cGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTAc                                                                                            >  1:1198372/1‑140 (MQ=255)

                                             cAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCa                                                                                                  >  2:1834/1‑132 (MQ=255)

                                             cAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCa                                                                                                  <  1:1834/132‑1 (MQ=255)

                                             cAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGa                                                                                          >  1:227371/1‑140 (MQ=255)

                                              aGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAg                                                                                                       >  1:842106/1‑126 (MQ=255)

                                              aGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGAt                                                                                         >  1:1340765/1‑140 (MQ=255)

                                               ggATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATc                                                                                        <  1:425512/140‑1 (MQ=255)

                                                   gCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTa                                                                                             >  2:1296084/1‑131 (MQ=255)

                                                   gCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTa                                                                                             <  1:1296084/131‑1 (MQ=255)

                                                   gCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGa                                                                                    >  1:316314/1‑140 (MQ=255)

                                                        cgcgcgcgGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAg                                                                               >  2:30547/1‑140 (MQ=255)

                                                        cgcgcgcgGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAg                                                                               <  1:206581/140‑1 (MQ=255)

                                                            cgcgGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAggcgg                                                                           <  2:699530/140‑1 (MQ=255)

                                                            cgcgGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAggcgg                                                                           <  2:1486086/140‑1 (MQ=255)

                                                            cgcgGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCAC‑AAGGGGCATGGTACGATCCAGATAAAggcggc                                                                          >  1:978079/1‑140 (MQ=255)

                                                               ggTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGa                                                                        <  1:1227193/140‑1 (MQ=255)

                                                                      gTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGt                                                                 <  2:1198372/140‑1 (MQ=255)

                                                                          cGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTgcgc                                                             <  1:470403/140‑1 (MQ=255)

                                                                          cGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTgcgc                                                             <  1:405878/140‑1 (MQ=255)

                                                                          cGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTgcgc                                                             <  1:1390377/140‑1 (MQ=255)

                                                                           ggTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCt                                                            >  1:36864/1‑140 (MQ=255)

                                                                           ggTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCt                                                            >  1:136193/1‑140 (MQ=255)

                                                                           ggTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCt                                                            >  1:1308728/1‑140 (MQ=255)

                                                                           ggTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCt                                                            >  2:666120/1‑140 (MQ=255)

                                                                           ggTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCt                                                            >  2:807797/1‑140 (MQ=255)

                                                                             tGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGa                                                                        >  2:360474/1‑126 (MQ=255)

                                                                             tGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCtgt                                                          >  1:549470/1‑140 (MQ=255)

                                                                                tgtgGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCa                                                       >  1:921995/1‑140 (MQ=255)

                                                                                    gTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCGGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAAt                                                    <  1:702983/139‑1 (MQ=255)

                                                                                    gTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCGGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAAt                                                    >  2:702983/1‑139 (MQ=255)

                                                                                       cgcgTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACgg                                                <  2:1254577/140‑1 (MQ=255)

                                                                                       cgcgTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACgg                                                >  1:1339546/1‑140 (MQ=255)

                                                                                       cgcgTCTTTAACGCTCGCGGTCAGGTGTTGACAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACgg                                                <  2:929603/140‑1 (MQ=255)

                                                                                         cgTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTa                                              >  1:499036/1‑140 (MQ=255)

                                                                                          gTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTaa                                             <  2:1339546/140‑1 (MQ=255)

                                                                                          gTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTaa                                             <  2:1209845/140‑1 (MQ=255)

                                                                                           tCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCtgt                                                          <  2:1411708/126‑1 (MQ=255)

                                                                                           tCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCtgt                                                          >  1:1411708/1‑126 (MQ=255)

                                                                                            cTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAAcc                                           >  1:1427678/1‑140 (MQ=255)

                                                                                             tttAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAAccc                                          >  2:1379520/1‑140 (MQ=255)

                                                                                               tAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCa                                        <  2:906467/140‑1 (MQ=255)

                                                                                                      cgcgGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGtt                                 >  2:1436256/1‑140 (MQ=255)

                                                                                                       gcgGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTg                                >  1:379563/1‑140 (MQ=255)

                                                                                                             aGGTGTTGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATc                          <  1:30547/140‑1 (MQ=255)

                                                                                                                  ttGGCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATCGACAt                     <  2:878790/140‑1 (MQ=255)

                                                                                                                     gCAGGGGCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATCGACATCgg                  >  1:874902/1‑140 (MQ=255)

                                                                                                                         gggCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATc                          >  1:689040/1‑128 (MQ=255)

                                                                                                                         gggCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATCGa                        >  2:238505/1‑130 (MQ=255)

                                                                                                                         gggCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATCGa                        <  1:238505/130‑1 (MQ=255)

                                                                                                                         gggCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATCGACATCGGTACa              >  2:23939/1‑140 (MQ=255)

                                                                                                                         gggCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATCGACATCGGTACa              >  1:65432/1‑140 (MQ=255)

                                                                                                                         gggCAGTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATCGACATCGGTACa              >  2:455651/1‑140 (MQ=255)

                                                                                                                              gTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATCGACATCGGTACATCGCa         <  2:921995/140‑1 (MQ=255)

                                                                                                                              gTGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATCGACATCGGTACATCGCa         >  1:1252604/1‑140 (MQ=255)

                                                                                                                               tGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATCGACATCGGTACATCGCAg        >  1:1265786/1‑140 (MQ=255)

                                                                                                                               tGGTTTCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATCG‑CATCGGTACATCGCAGc       >  2:775872/1‑140 (MQ=255)

                                                                                                                                   ttCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATCGACATCGGTACATCGCAGCTgg    >  2:385227/1‑140 (MQ=255)

                                                                                                                                    tCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATCGACATCGGTACATCGCAGCTGgc   >  1:764270/1‑140 (MQ=255)

                                                                                                                                    tCTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATCGACATCGGTACATCGCAGCTGgc   >  1:469437/1‑140 (MQ=255)

                                                                                                                                     cTGGCCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATCGACATCGGTACATCGCAGCTGgcg  <  1:1372338/140‑1 (MQ=255)

CAGCAATATACGGTAGCGGGTAAAGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGACCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATCGACATCGGTACATCGCAGCTGGCG  >  NC_000913/1061392‑1061664

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`