Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,144,436	A→G	intergenic (‑69/‑66)	rne ← / → yceQ	ribonuclease E/DUF2655 domain‑containing protein YceQ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,144,436	0	A	G	100.0%	309.4 / NA	86	intergenic (‑69/‑66)	rne/yceQ	ribonuclease E/DUF2655 domain‑containing protein YceQ
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (47/39);  total (47/39)

CGCTGCCCATCTACAAGGGCAACGCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGAAACAGACTGGGTATTAC  >  NC_000913/1144300‑1144567                                                                                                                                         |                                                                                                                                     cGCTGCCCATCTACAAGGGCAACGCACAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCg                                                                                                                                   >  2:1283122/1‑140 (MQ=255)  gCTGCCCATCTACAAGGGCAACGCGCAACTCTTCCTGCTAAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGa                                                                                                                                  <  1:1176422/140‑1 (MQ=255)   cTGCCCATCTACAAGGGCAACGCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGAt                                                                                                                                 <  1:421366/140‑1 (MQ=255)      cccATCTACAAGGGCAACGCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGc                                                                                                                              >  2:443924/1‑140 (MQ=255)      cccATCTACAAGGGCAACGCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGc                                                                                                                              >  2:887533/1‑140 (MQ=255)      cccATCTACAAGGGCAACGCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGc                                                                                                                              >  2:408300/1‑140 (MQ=255)        cATCTACAAGGGCAACGCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCt                                                                                                                            <  1:834783/140‑1 (MQ=255)          tCTACAAGGGCAACGCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCg                                                                                                                          >  2:980348/1‑140 (MQ=255)              cAAGGGCAACGCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTc                                                                                                                           >  2:1492043/1‑135 (MQ=255)              cAAGGGCAACGCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTc                                                                                                                           <  1:1492043/135‑1 (MQ=255)                  ggCAACGCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAgt                                                                                                                  >  1:1455805/1‑140 (MQ=255)                   gCAACGCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAgtc                                                                                                                 >  2:178814/1‑140 (MQ=255)                    cAACGCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAgtcg                                                                                                                <  1:424666/140‑1 (MQ=255)                     aaCGCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAgtcgc                                                                                                               >  2:1451051/1‑140 (MQ=255)                      aCGCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGcc                                                                                                                             >  1:881506/1‑125 (MQ=255)                      aCGCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGcc                                                                                                                             <  2:881506/125‑1 (MQ=255)                      aCGCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTa                                                                                                                    >  1:1455195/1‑134 (MQ=255)                      aCGCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTa                                                                                                                    <  2:1455195/134‑1 (MQ=255)                        gcgcAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAgtcgcgtc                                                                                                            >  2:351167/1‑140 (MQ=255)                          gcAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAgtcgcgtcgc                                                                                                          <  1:980348/140‑1 (MQ=255)                             aCTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGATGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCaa                                                                                                       >  1:268874/1‑140 (MQ=255)                                  tCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCa                                                                                                  <  2:723526/140‑1 (MQ=255)                                  tCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCa                                                                                                  <  2:734839/140‑1 (MQ=255)                                   ccTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAc                                                                                                 >  1:1305710/1‑140 (MQ=255)                                       ctgAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGtt                                                                                            <  2:1305710/140‑1 (MQ=255)                                          aGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATc                                                                                         >  1:616359/1‑140 (MQ=255)                                            ttGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAgtcgcgtcgc                                                                                                          <  1:41352/122‑1 (MQ=255)                                            ttGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAgtcgcgtcgc                                                                                                          >  2:41352/1‑122 (MQ=255)                                            ttGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGt                                                                                       <  1:443924/140‑1 (MQ=255)                                            ttGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGt                                                                                       <  1:1201957/140‑1 (MQ=255)                                              gCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCa                                                                                     <  1:1448867/140‑1 (MQ=255)                                                    aTTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCaa                                                                               >  2:370480/1‑140 (MQ=255)                                                    aTTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCaa                                                                               >  1:75669/1‑140 (MQ=255)                                                      tAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAag                                                                             <  2:152515/140‑1 (MQ=255)                                                            tCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGgcgc                                                                       <  2:1455805/140‑1 (MQ=255)                                                            tCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGgcgc                                                                       >  1:105498/1‑140 (MQ=255)                                                            tCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGgcgc                                                                       <  1:370480/140‑1 (MQ=255)                                                             cTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCa                                                                      <  2:1422262/140‑1 (MQ=255)                                                             cTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCa                                                                      <  1:178814/140‑1 (MQ=255)                                                              ttttCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCag                                                                     >  2:185606/1‑140 (MQ=255)                                                               tttCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCaga                                                                    >  2:711975/1‑140 (MQ=255)                                                                    tCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTc                                                               >  2:1500754/1‑140 (MQ=255)                                                                    tCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTc                                                               >  2:1181999/1‑140 (MQ=255)                                                                        aaCTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGtt                                                           <  1:1500754/140‑1 (MQ=255)                                                                        aaCTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGtt                                                           >  1:691521/1‑140 (MQ=255)                                                                              cTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGt                                                     >  2:341254/1‑140 (MQ=255)                                                                                    attCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCa                                               <  1:1181999/140‑1 (MQ=255)                                                                                    attCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCa                                               <  1:1283122/140‑1 (MQ=255)                                                                                     ttCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCAt                                              >  1:1475009/1‑140 (MQ=255)                                                                                      tCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATg                                             <  1:1451051/140‑1 (MQ=255)                                                                                        ttACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCg                                           >  1:1318043/1‑140 (MQ=255)                                                                                         tACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCgg                                          >  2:615160/1‑140 (MQ=255)                                                                                         tACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCgg                                          >  1:432031/1‑140 (MQ=255)                                                                                           cATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGaa                                        >  2:1405308/1‑140 (MQ=255)                                                                                            aTTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGaaa                                       <  1:1099867/140‑1 (MQ=255)                                                                                             ttGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGaaaa                                      >  2:109208/1‑140 (MQ=255)                                                                                               gacgacTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAAc                                    >  2:453755/1‑140 (MQ=255)                                                                                                acgacTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGTGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACa                                   >  1:99757/1‑140 (MQ=255)                                                                                                acgacTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCa                                               >  1:321156/1‑128 (MQ=255)                                                                                                acgacTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCa                                               <  2:321156/128‑1 (MQ=255)                                                                                                acgacTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACa                                   >  1:577297/1‑140 (MQ=255)                                                                                                acgacTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACa                                   >  1:1333500/1‑140 (MQ=255)                                                                                                  gacTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAg                                  >  2:262998/1‑139 (MQ=255)                                                                                                  gacTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAg                                  <  1:262998/139‑1 (MQ=255)                                                                                                       aGCTGCGGGCAAAGTAACGCCTTTCCAGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAAt                            >  1:364012/1‑140 (MQ=255)                                                                                                            cGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCa                       >  2:260248/1‑140 (MQ=255)                                                                                                            cGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCa                       <  1:341254/140‑1 (MQ=255)                                                                                                            cGGGCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCa                       >  2:566943/1‑140 (MQ=255)                                                                                                              ggCAAAGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCaaa                     >  2:1248886/1‑140 (MQ=255)                                                                                                                 aaaGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCACGGGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGa                   >  1:1024536/1‑140 (MQ=255)                                                                                                                  aaGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGaaa                 <  2:75669/140‑1 (MQ=255)                                                                                                                   aGTAACGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGaaaa                >  2:246504/1‑139 (MQ=255)                                                                                                                      aaCGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGAAACAGa             <  1:185606/140‑1 (MQ=255)                                                                                                                      aaCGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGAAACAGa             <  2:40075/140‑1 (MQ=255)                                                                                                                      aaCGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGAAACAGa             <  1:351167/140‑1 (MQ=255)                                                                                                                      aaCGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGAAACAGa             <  2:1333500/140‑1 (MQ=255)                                                                                                                      aaCGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGAAACAGa             <  2:127365/140‑1 (MQ=255)                                                                                                                      aaCGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGAAACAGa             <  1:408300/140‑1 (MQ=255)                                                                                                                      aaCGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGAAACAGa             <  1:887533/140‑1 (MQ=255)                                                                                                                      aaCGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGAAACAGa             >  1:519286/1‑140 (MQ=255)                                                                                                                        cGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGTGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGAAACAGACt           <  2:99757/140‑1 (MQ=255)                                                                                                                        cGCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGAAACAGACt           <  2:432031/140‑1 (MQ=255)                                                                                                                         gCCTTTCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGAAACAGACTg          >  2:575284/1‑140 (MQ=255)                                                                                                                              tCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCACGGGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGAAACAGACTGGGTa      <  2:1024536/140‑1 (MQ=255)                                                                                                                              tCCGGGTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGAAACAGACTGGGTAt     >  2:527776/1‑140 (MQ=255)                                                                                                                                 gggTGTGAGCCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTTTCAAAGAAACAGACTGGGTATTAc  >  1:43667/1‑140 (MQ=255)                                                                                                                                         |                                                                                                                                     CGCTGCCCATCTACAAGGGCAACGCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCAC‑GGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGAAACAGACTGGGTATTAC  >  NC_000913/1144300‑1144567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑