Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,509,166	T→C	intergenic (‑102/‑120)	yncJ ← / → hicA	protein YncJ/toxin of the HicA‑HicB toxin‑antitoxin system

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,509,166	0	T	C	100.0%	254.2 / NA	72	intergenic (‑102/‑120)	yncJ/hicA	protein YncJ/toxin of the HicA‑HicB toxin‑antitoxin system
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (33/39);  total (33/39)

CGTTAATAAGACAACCGATAACGCCTTCGTAAACATCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGT  >  NC_000913/1509029‑1509301                                                                                                                                          |                                                                                                                                        cGTTAATAAGACAACCGATAACGCCTTCGTAAACATCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATcttccctc                                                                                                                                       >  1:994368/1‑140 (MQ=255)       taaGACAACCGATAACGCCTTCGTAAACATCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGAtt                                                                                                                                 <  1:51318/140‑1 (MQ=255)       taaGACAACCGATAACGCCTTCGTAAACATCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGAtt                                                                                                                                 <  2:1086025/140‑1 (MQ=255)            cAACCGATAACGCCTTCGTAAACATCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTttgca                                                                                                                            >  1:57290/1‑140 (MQ=255)            cAACCGATAACGCCTTCGTAAACATCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTttgca                                                                                                                            >  1:158358/1‑140 (MQ=255)            cAACCGATAACGCCTTCGTAAACATCCGGCCACCTTTTTCTAACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTttgca                                                                                                                            >  2:1288147/1‑140 (MQ=255)             aaCCGATAACGCCTTCGTAAACATCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTttgca                                                                                                                            >  1:1444307/1‑139 (MQ=255)             aaCCGATAACGCCTTCGTAAACATCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTttgca                                                                                                                            <  2:1444307/139‑1 (MQ=255)               ccGATAACGCCTTCGTAAACATCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGAAATCTTCCCTCCTGATTttgcattg                                                                                                                         >  2:18392/1‑140 (MQ=255)                  aTAACGCCTTCGTAAACATCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGACTCTTCCCTCCTGATTTtgcattgcat                                                                                                                      >  1:749516/1‑140 (MQ=255)                  aTAACGCCTTCGTAAACATCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTtgcattgcat                                                                                                                      >  2:627902/1‑140 (MQ=255)                         cTTCGTAAACATCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCg                                                                                                               >  2:744829/1‑140 (MQ=255)                         cTTCGTAAACATCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCg                                                                                                               >  2:1010521/1‑140 (MQ=255)                         cTTCGTAAACATCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCg                                                                                                               >  1:440015/1‑140 (MQ=255)                          ttCGTAAACATCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGt                                                                                                              <  2:1184547/140‑1 (MQ=255)                           tCGTAAACATCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGtt                                                                                                             >  1:636355/1‑140 (MQ=255)                            cGTAAACATCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTg                                                                                                            >  2:632066/1‑140 (MQ=255)                               aaaCATCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTgcgg                                                                                                         <  2:1229198/140‑1 (MQ=255)                                    tCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGAtt                                                                                                    <  2:171555/140‑1 (MQ=255)                                     ccTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGAttt                                                                                                   >  2:323492/1‑140 (MQ=255)                                     ccTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGAttt                                                                                                   >  1:230666/1‑140 (MQ=255)                                      cTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTa                                                                                                  >  2:749415/1‑140 (MQ=255)                                        gCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGt                                                                                                >  2:1412495/1‑140 (MQ=255)                                               ttttCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTAttt                                                                                         >  2:1085530/1‑140 (MQ=255)                                                   tttACCTTTTGCCGATATGATGCCGATCGTTTATTGAGGTTATTAGTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAGTGTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGa                                                                                     <  2:749516/139‑1 (MQ=255)                                                   cTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGa                                                                                     <  2:799272/140‑1 (MQ=255)                                                    ttACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAg                                                                                    <  2:419538/140‑1 (MQ=255)                                                    ttACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAg                                                                                    <  2:1180757/140‑1 (MQ=255)                                                     tACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGc                                                                                   <  1:398642/140‑1 (MQ=255)                                                     tACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGc                                                                                   <  1:1412495/140‑1 (MQ=255)                                                           ttGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTa                                                                             >  1:1073964/1‑140 (MQ=255)                                                            tGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTac                                                                            >  1:569540/1‑140 (MQ=255)                                                            tGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTac                                                                            >  1:1376825/1‑140 (MQ=255)                                                               cGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTacaca                                                                         <  2:810/140‑1 (MQ=255)                                                               cGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTacaca                                                                         <  1:962576/140‑1 (MQ=255)                                                                gCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTacacac                                                                        <  1:1335913/140‑1 (MQ=255)                                                                 cTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACg                                                                       <  2:994368/140‑1 (MQ=255)                                                                 cTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACg                                                                       <  1:1499983/140‑1 (MQ=255)                                                                  tATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACgg                                                                      <  1:1010521/140‑1 (MQ=255)                                                                       tgCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTa                                                                 <  1:287773/140‑1 (MQ=255)                                                                          cGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAac                                                              <  1:1085530/140‑1 (MQ=255)                                                                           gATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAaca                                                             >  1:105059/1‑140 (MQ=255)                                                                            aTCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAacac                                                            >  2:452965/1‑140 (MQ=255)                                                                              cGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTa                                                          >  1:139642/1‑140 (MQ=255)                                                                                     tGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTa                                                   <  1:96813/140‑1 (MQ=255)                                                                                     tGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTa                                                   <  2:347400/140‑1 (MQ=255)                                                                                     tGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTa                                                   <  2:876802/140‑1 (MQ=255)                                                                                     tGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTa                                                   <  1:897347/140‑1 (MQ=255)                                                                                        ggTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACtt                                                <  2:636355/140‑1 (MQ=255)                                                                                        ggTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACtt                                                <  2:158358/140‑1 (MQ=255)                                                                                        ggTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACtt                                                >  1:504733/1‑140 (MQ=255)                                                                                        ggTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACtt                                                <  2:182714/140‑1 (MQ=255)                                                                                          ttattaTTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTttg                                              <  2:1376825/140‑1 (MQ=255)                                                                                          ttattaTTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTttg                                              <  1:744829/140‑1 (MQ=255)                                                                                          ttattaTTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTttg                                              <  2:1073964/140‑1 (MQ=255)                                                                                            attattCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTttgtt                                            >  2:1237878/1‑140 (MQ=255)                                                                                            attattCAGTTTTGCAAATTACCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTttgtt                                            >  2:714879/1‑140 (MQ=255)                                                                                             ttattCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTttgttg                                           <  1:632066/140‑1 (MQ=255)                                                                                               attCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGat                                         <  2:230666/140‑1 (MQ=255)                                                                                                   aGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATAc                                     >  1:1001806/1‑140 (MQ=255)                                                                                                    gTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTATTGATATACt                                    <  1:452965/140‑1 (MQ=255)                                                                                                     ttttGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTc                                   >  2:1102472/1‑140 (MQ=255)                                                                                                       ttGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAg                                 <  1:1102472/140‑1 (MQ=255)                                                                                                               tAGCGCAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAggg                         >  2:844927/1‑140 (MQ=255)                                                                                                                  cgcAAAGAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAgg                      <  2:325316/140‑1 (MQ=255)                                                                                                                        gAAATTCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGAtgt                <  2:1001806/140‑1 (MQ=255)                                                                                                                            ttCTGGAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTGATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGaaa            >  1:755931/1‑140 (MQ=255)                                                                                                                                 gAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCg                    >  2:730951/1‑127 (MQ=255)                                                                                                                                 gAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCg                    <  1:730951/127‑1 (MQ=255)                                                                                                                                 gAATCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAg       <  1:714879/140‑1 (MQ=255)                                                                                                                                  aaTCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGc      <  1:627902/140‑1 (MQ=255)                                                                                                                                   aTCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCg     >  2:1361323/1‑140 (MQ=255)                                                                                                                                   aTCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCg     >  1:55020/1‑140 (MQ=255)                                                                                                                                    tCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAgg                      <  2:635405/122‑1 (MQ=255)                                                                                                                                    tCTTCCCTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAgg                      >  1:635405/1‑122 (MQ=255)                                                                                                                                     cttccctcCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAg   <  2:504733/140‑1 (MQ=255)                                                                                                                                      ttccctccTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGt  >  1:1175065/1‑140 (MQ=255)                                                                                                                                      ttccctccTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGt  >  1:463213/1‑140 (MQ=255)                                                                                                                                          |                                                                                                                                        CGTTAATAAGACAACCGATAACGCCTTCGTAAACATCCTGCCACCTTTTTCTTACCTTTTGCCGCTATGATGCCGATCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGT  >  NC_000913/1509029‑1509301

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑