BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,527,395	A→G	intergenic (+243/‑495)	yncH → / → rhsE	DUF5445 domain‑containing protein YncH/RhsE protein in rhs element

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,527,395	0	A	G	100.0%	429.9 / NA	120	intergenic (+243/‑495)	yncH/rhsE	DUF5445 domain‑containing protein YncH/RhsE protein in rhs element
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (66/54); total (66/54)

Only 100 of 120 total aligned reads displayed.

TTATTCAAGAAAATGGATGTATTTTAAATGTTGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTACCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCTTATTATATTCATCAGGTGAATTTAATAAATTCCTAATTTGA  >  NC_000913/1527260‑1527531

ttATTCAAGAAAATGGATGTATTTTAAATGTTGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCAc                                                                                                                                      <  2:512482/140‑1 (MQ=255)

          aaaTGGATGTATTTTAAATGTTGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGa                                                                                                                            <  2:601728/140‑1 (MQ=255)

                aTGTATTTTAAATGTTGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATcc                                                                                                                      >  1:1153123/1‑140 (MQ=255)

                  gTATTTTAAATGTTGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCgg                                                                                                                    <  1:840590/140‑1 (MQ=255)

                  gTATTTTAAATGTTGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCgg                                                                                                                    <  1:54074/140‑1 (MQ=255)

                       ttAAATGTTGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCa                                                                                                               <  2:842336/140‑1 (MQ=255)

                         aaaTGTTGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCa                                                                                                                  <  1:819922/135‑1 (MQ=255)

                         aaaTGTTGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCa                                                                                                                  >  2:819922/1‑135 (MQ=255)

                         aaaTGTTGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAgg                                                                                                             >  2:416274/1‑140 (MQ=255)

                         aaaTGTTGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAgg                                                                                                             <  1:916441/140‑1 (MQ=255)

                               tGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAggtggtgg                                                                                                       >  2:1156033/1‑140 (MQ=255)

                               tGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAggtggtgg                                                                                                       >  2:681892/1‑140 (MQ=255)

                                   tCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCa                                                                                                   <  2:1042038/140‑1 (MQ=255)

                                    cTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAg                                                                                                  <  2:536283/140‑1 (MQ=255)

                                             aCCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGa                                                                                         >  1:980252/1‑140 (MQ=255)

                                             aCCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGa                                                                                         >  2:1083044/1‑140 (MQ=255)

                                              ccTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGaa                                                                                        >  1:556095/1‑140 (MQ=255)

                                              ccTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGaa                                                                                        >  1:347666/1‑140 (MQ=255)

                                              ccTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGaa                                                                                        >  2:425038/1‑140 (MQ=255)

                                              ccTAATCAATAGATTATCAAGTGAGAGCTACACACTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGaa                                                                                        >  2:131133/1‑140 (MQ=255)

                                                 aaTCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATg                                                                                     >  1:186816/1‑140 (MQ=255)

                                                 aaTCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATg                                                                                     >  1:308129/1‑140 (MQ=255)

                                                   tCAATAGATTATCAAGTGAGAGCTATACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGt                                                                                   <  1:624840/140‑1 (MQ=255)

                                                   tCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGt                                                                                   >  2:509541/1‑140 (MQ=255)

                                                   tCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGt                                                                                   >  2:1452488/1‑140 (MQ=255)

                                                   tCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGt                                                                                   <  1:1269460/140‑1 (MQ=255)

                                                   tCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGt                                                                                   <  2:1153123/140‑1 (MQ=255)

                                                   tCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGt                                                                                   >  1:1013916/1‑140 (MQ=255)

                                                     aaTAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTTGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTcc                                                                                 <  1:1387670/140‑1 (MQ=255)

                                                     aaTAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTcc                                                                                 <  2:221970/140‑1 (MQ=255)

                                                     aaTAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTcc                                                                                 <  2:1144709/140‑1 (MQ=255)

                                                     aaTAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTcc                                                                                 <  1:1156033/140‑1 (MQ=255)

                                                       tAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTcccc                                                                               >  1:1335138/1‑140 (MQ=255)

                                                        aGATTATCAAGTGAGAGCTACACACTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCt                                                                              <  1:131133/140‑1 (MQ=255)

                                                         gATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTc                                                                             >  1:127207/1‑140 (MQ=255)

                                                          aTTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCg                                                                            >  2:645871/1‑140 (MQ=255)

                                                           ttATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCgg                                                                           <  1:440187/140‑1 (MQ=255)

                                                            tATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCggg                                                                          >  2:1247486/1‑140 (MQ=255)

                                                            tATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCggg                                                                          >  1:383195/1‑140 (MQ=255)

                                                            tATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCggg                                                                          >  2:471295/1‑140 (MQ=255)

                                                             aTCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCgggg                                                                         <  1:1083044/140‑1 (MQ=255)

                                                                aaGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAg                                                                      <  1:416274/140‑1 (MQ=255)

                                                                    gagaGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAg                                                                      <  1:430819/136‑1 (MQ=255)

                                                                    gagaGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAg                                                                      >  2:430819/1‑136 (MQ=255)

                                                                    gagaGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGt                                                                  >  2:237573/1‑140 (MQ=255)

                                                                     agagCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCt                                                                              >  1:654171/1‑127 (MQ=255)

                                                                     agagCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCt                                                                              <  2:654171/127‑1 (MQ=255)

                                                                     agagCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTc                                                                 >  2:428947/1‑140 (MQ=255)

                                                                      gagCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCa                                                                <  1:425038/140‑1 (MQ=255)

                                                                        gCTACCCATTATTGGAGGGGCAGGGGAAAACATCATTTTGCGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCCGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCatt                                                              <  2:1341861/140‑1 (MQ=255)

                                                                            cacaTTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCatt                                                              <  1:103944/136‑1 (MQ=255)

                                                                            cacaTTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCatt                                                              >  2:103944/1‑136 (MQ=255)

                                                                             acaTTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTAtttt                                                         <  2:393001/140‑1 (MQ=255)

                                                                             acaTTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTAtttt                                                         <  1:421845/140‑1 (MQ=255)

                                                                               attattGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCt                                                       <  2:308129/140‑1 (MQ=255)

                                                                                 tattGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTAt                                                     >  1:810579/1‑140 (MQ=255)

                                                                                      gAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTAt                                                >  1:663616/1‑140 (MQ=255)

                                                                                        ggggCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTAttt                                              <  2:127207/140‑1 (MQ=255)

                                                                                        ggggCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTAttt                                              <  1:261336/140‑1 (MQ=255)

                                                                                         gggCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTAt                                                >  2:1232381/1‑137 (MQ=255)

                                                                                         gggCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTAt                                                <  1:1232381/137‑1 (MQ=255)

                                                                                          ggCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGc                                            <  1:121856/140‑1 (MQ=255)

                                                                                          ggCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGc                                            <  2:1335138/140‑1 (MQ=255)

                                                                                           gCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGTGTTGTCATTTTTTTCTATGCTATTTGCt                                           >  2:740406/1‑140 (MQ=255)

                                                                                           gCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTAttt                                              <  2:1247191/137‑1 (MQ=255)

                                                                                           gCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTAttt                                              >  1:1247191/1‑137 (MQ=255)

                                                                                           gCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCt                                           >  1:409584/1‑140 (MQ=255)

                                                                                           gCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCt                                           >  1:1248390/1‑140 (MQ=255)

                                                                                           gCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCt                                           >  1:1396494/1‑140 (MQ=255)

                                                                                           gCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCt                                           >  2:31721/1‑140 (MQ=255)

                                                                                           gCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCt                                           >  2:139180/1‑140 (MQ=255)

                                                                                           gCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCt                                           >  2:798570/1‑140 (MQ=255)

                                                                                           gCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCt                                           >  2:945729/1‑140 (MQ=255)

                                                                                           gCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGAGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCt                                           >  2:1256705/1‑140 (MQ=255)

                                                                                             aGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCtta                                         <  1:59414/140‑1 (MQ=255)

                                                                                             aGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCtta                                         <  1:645871/140‑1 (MQ=255)

                                                                                             aGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCtta                                         >  2:59414/1‑140 (MQ=255)

                                                                                             aGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCtta                                         >  2:472085/1‑140 (MQ=255)

                                                                                                ggAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCttatta                                      <  1:681892/140‑1 (MQ=255)

                                                                                                ggAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCttatta                                      <  1:509541/140‑1 (MQ=255)

                                                                                                 gAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTAt                                                >  2:973844/1‑129 (MQ=255)

                                                                                                   aaaCACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGc                                            <  2:1220613/131‑1 (MQ=255)

                                                                                                   aaaCACCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGc                                            >  1:1220613/1‑131 (MQ=255)

                                                                                                       acCATTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCTTATTATATtcat                               <  2:347666/140‑1 (MQ=255)

                                                                                                          aTTTTGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCTTATTATATTCATCAg                            >  1:843552/1‑140 (MQ=255)

                                                                                                            tttGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCTTATTATATTCATCAGGt                          <  2:383195/140‑1 (MQ=255)

                                                                                                            tttGGGAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCTTATTATATTCATCAGGt                          <  2:1248390/140‑1 (MQ=255)

                                                                                                                ggAACAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCTTATTATATTCATCAGGTGAAt                      >  2:948223/1‑140 (MQ=255)

                                                                                                                   aCAATGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCTTATTATATTCATCAGGTGAATTta                   >  1:1453621/1‑140 (MQ=255)

                                                                                                                       tGCATCAGGTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCTTATTATATTCATCAGGTGAATTtaataa               >  2:764720/1‑140 (MQ=255)

                                                                                                                              ggTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCTTATTATATTCATCAGGTGAATTTAATAAATTCCTa        >  1:984754/1‑140 (MQ=255)

                                                                                                                               gTACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCTTATTATATTCATCAGGTGAATTTAATAAATTCCTaa       >  1:1254731/1‑140 (MQ=255)

                                                                                                                                tACTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCTTATTATATTCATCAGGTGAATTTAATAAATTCCTAAt      <  2:1234610/140‑1 (MQ=255)

                                                                                                                                 aCTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCTTATTATATTCATCAGGTGAATTTAATAAATTCCTAAtt     >  2:617152/1‑140 (MQ=255)

                                                                                                                                 aCTCTTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCTTATTATATTCATCAGGTGAATTTAATAAATTCCTAAtt     >  2:37535/1‑140 (MQ=255)

                                                                                                                                  ctctTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCTTATTATATTCATCAGGTGAATTTAATAAATTCCTAAttt    >  2:679563/1‑140 (MQ=255)

                                                                                                                                  ctctTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCTTATTATATTCATCAGGTGAATTTAATAAATTCCTAAttt    >  1:1222997/1‑140 (MQ=255)

                                                                                                                                  ctctTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCTTATTATATTCATCAGGTGAATTTAATAAATTCCTAAttt    >  2:525877/1‑140 (MQ=255)

                                                                                                                                   tctTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCTTATTATATTCATCAGGTGAATTTAATAAATTCCTAATTTg   >  2:476636/1‑140 (MQ=255)

                                                                                                                                    ctTGCCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCTTATTATATTCATCAGGTGAATTTAATAAATTCCTAATTTGa  >  1:528980/1‑140 (MQ=255)

TTATTCAAGAAAATGGATGTATTTTAAATGTTGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTACCACTGAAGCAAGATCATCCGGCACCAGGTGGTGGTGCAGTGCTTTGGAAATGGTCCCCTCGGGGGAGTTGTCATTATTTTCTATGCTATTTGCTTATTATATTCATCAGGTGAATTTAATAAATTCCTAATTTGA  >  NC_000913/1527260‑1527531

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`