BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,803,246	G→A	pseudogene (153/1900 nt)	arpB →	putative ankyrin repeat protein B, N‑terminal fragment

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,803,246	0	G	A	100.0%	412.7 / NA	116	pseudogene (153/1900 nt)	arpB	putative ankyrin repeat protein B, N‑terminal fragment
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (53/63); total (53/63)

Only 100 of 117 total aligned reads displayed.

ATCATTATCAGAACTCATTATAAGTCTCCTCATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATGCTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTCATTACATTACA  >  NC_000913/1803109‑1803380

atCATTATCAGAACTCATTATAAGTCTCCTCATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACt                                                                                                                                      >  1:269916/1‑140 (MQ=255)

 tCATTATCAGAACTCATTATAAGTCTCCTCATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTg                                                                                                                                     <  1:73870/140‑1 (MQ=255)

 tCATTATCAGAACTCATTATAAGTCTCCTCATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTg                                                                                                                                     <  2:1323272/140‑1 (MQ=255)

      aTCAGAACTCATTATAAGTCTCCTCATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATa                                                                                                                                <  2:486235/140‑1 (MQ=255)

      aTCAGAACTCATTATAAGTCTCCTCATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATa                                                                                                                                <  2:592524/140‑1 (MQ=255)

      aTCAGAACTCATTATAAGTCTCCTCATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTCACTTAAGTTCGATACTGTCATa                                                                                                                                <  2:863415/140‑1 (MQ=255)

         aGAACTCATTATAAGTCTCCTCATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACtg                                                                                                                             <  1:1310187/140‑1 (MQ=255)

              tCATTATAAGTCTCCTCATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTa                                                                                                                        <  2:269916/140‑1 (MQ=255)

                     aaGTCTCCTCATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGa                                                                                                                 >  2:1087550/1‑140 (MQ=255)

                       gTCTCCTCATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAAt                                                                                                               >  2:1277058/1‑140 (MQ=255)

                          tcctcATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTa                                                                                                            >  1:1380108/1‑140 (MQ=255)

                          tcctcATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTa                                                                                                            >  1:310270/1‑140 (MQ=255)

                          tcctcATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTa                                                                                                            >  1:96536/1‑140 (MQ=255)

                          tcctcATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTa                                                                                                            >  1:349894/1‑140 (MQ=255)

                           cctcATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAAt                                                                                                               >  1:330755/1‑136 (MQ=255)

                            ctcATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTAcc                                                                                                          >  2:928399/1‑140 (MQ=255)

                            ctcATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTAcc                                                                                                          >  1:993319/1‑140 (MQ=255)

                                 aGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCaaa                                                                                                     <  2:1380108/140‑1 (MQ=255)

                                 aGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCaaa                                                                                                     <  2:410291/140‑1 (MQ=255)

                                      gCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTc                                                                                                >  2:1401090/1‑140 (MQ=255)

                                      gCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTc                                                                                                >  1:334421/1‑140 (MQ=255)

                                         caTCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGaa                                                                                             >  1:634933/1‑140 (MQ=255)

                                            cGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGaaaaa                                                                                          >  2:482696/1‑140 (MQ=255)

                                                 gCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATca                                                                                     >  1:1232595/1‑140 (MQ=255)

                                                      aTACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACaaaa                                                                                >  2:45855/1‑140 (MQ=255)

                                                      aTACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACaaaa                                                                                <  2:334421/140‑1 (MQ=255)

                                                        aCCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAAtt                                                                              >  2:1219630/1‑140 (MQ=255)

                                                        aCCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAAtt                                                                              >  2:215655/1‑140 (MQ=255)

                                                         ccAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTg                                                                             >  1:731595/1‑140 (MQ=255)

                                                            acacCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTa                                                                          <  2:1412976/140‑1 (MQ=255)

                                                               ccTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTc                                                                       >  1:938389/1‑140 (MQ=255)

                                                               ccTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTc                                                                       <  1:1056349/140‑1 (MQ=255)

                                                                 ttCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCa                                                                     <  1:377187/140‑1 (MQ=255)

                                                                 ttCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCa                                                                     <  1:1390385/140‑1 (MQ=255)

                                                                  tcatcaGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCAc                                                                    >  2:512209/1‑140 (MQ=255)

                                                                   catcaGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACt                                                                   <  1:1296067/140‑1 (MQ=255)

                                                                    atcaGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTg                                                                  <  2:941989/140‑1 (MQ=255)

                                                                    atcaGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTg                                                                  <  2:938389/140‑1 (MQ=255)

                                                                      caGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGcc                                                                <  2:634933/140‑1 (MQ=255)

                                                                        gagCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCt                                                              >  2:1172233/1‑140 (MQ=255)

                                                                          gCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCttt                                                            <  2:375268/140‑1 (MQ=255)

                                                                          gCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCttt                                                            >  1:375268/1‑140 (MQ=255)

                                                                             tATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTa                                                         >  2:1311302/1‑140 (MQ=255)

                                                                              aTTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTAc                                                        >  2:137314/1‑140 (MQ=255)

                                                                               ttAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCttt                                                            <  1:756526/135‑1 (MQ=255)

                                                                               ttAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCttt                                                            >  2:756526/1‑135 (MQ=255)

                                                                                  aTCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCAtt                                                    <  1:928399/140‑1 (MQ=255)

                                                                                    cAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTaa                                                  >  2:521220/1‑140 (MQ=255)

                                                                                       ttcgcgagcCAGTCCATTCCCCTAATTGACTACTCTGACTTCAATTTGCTTATCTCATACTTTGGTACTCACGGATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTTCAATCCCCTTTTTACCCTTaaact                                               >  2:1157008/4‑137 (MQ=255)

                                                                                        ttGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACttt                                              <  1:45855/140‑1 (MQ=255)

                                                                                         tGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTg                                             >  2:731477/1‑140 (MQ=255)

                                                                                         tGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTg                                             <  1:512209/140‑1 (MQ=255)

                                                                                            gcgcCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCa                                          <  2:1232595/140‑1 (MQ=255)

                                                                                            gcgcCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCa                                          <  2:1178012/140‑1 (MQ=255)

                                                                                            gcgcCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACCTTGCCa                                          <  1:482696/140‑1 (MQ=255)

                                                                                             cgcCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCAc                                         <  2:310270/140‑1 (MQ=255)

                                                                                             cgcCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCAc                                         <  1:1201461/140‑1 (MQ=255)

                                                                                             cgcCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCAc                                         <  1:1277058/140‑1 (MQ=255)

                                                                                               ccAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACtt                                       <  2:296096/140‑1 (MQ=255)

                                                                                                cAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTc                                      >  1:514556/1‑140 (MQ=255)

                                                                                                 aGCTCATCTCCCTACTTGATTCCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCa                                     <  1:1485911/140‑1 (MQ=255)

                                                                                                 aGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCa                                     <  1:1311302/140‑1 (MQ=255)

                                                                                                 aGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCa                                     <  2:1197175/140‑1 (MQ=255)

                                                                                                 aGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCa                                     <  1:1325114/140‑1 (MQ=255)

                                                                                                 aGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCa                                     <  2:349894/140‑1 (MQ=255)

                                                                                                   cTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCAcc                                   <  2:1018141/140‑1 (MQ=255)

                                                                                                   cTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCAcc                                   >  2:1242791/1‑140 (MQ=255)

                                                                                                   cTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCAcc                                   <  1:165084/140‑1 (MQ=255)

                                                                                                   cTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCAcc                                   <  1:800264/140‑1 (MQ=255)

                                                                                                      atcaCCCTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACccat                                <  2:117797/140‑1 (MQ=255)

                                                                                                            cTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATAc                          <  1:1055790/140‑1 (MQ=255)

                                                                                                            cTACTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATAc                          <  1:168384/140‑1 (MQ=255)

                                                                                                              aCTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAg                        <  1:1172233/140‑1 (MQ=255)

                                                                                                               cTTGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTATCTTTGCCACTTCACCCATCCATACAGa                       >  2:1460575/1‑140 (MQ=255)

                                                                                                                ttGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGaa                      >  2:718116/1‑140 (MQ=255)

                                                                                                                ttGATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGaa                      >  2:417787/1‑140 (MQ=255)

                                                                                                                  gATACCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGaaaa                    >  2:283752/1‑140 (MQ=255)

                                                                                                                     aCCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAatat                 >  1:1050533/1‑140 (MQ=255)

                                                                                                                     aCCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAatat                 <  2:514556/140‑1 (MQ=255)

                                                                                                                     aCCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAatat                 >  2:1476605/1‑140 (MQ=255)

                                                                                                                     aCCTCTGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAatat                 <  1:449752/140‑1 (MQ=255)

                                                                                                                       ctctGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATAc                          >  2:869544/1‑129 (MQ=255)

                                                                                                                       ctctGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATAc                          <  1:869544/129‑1 (MQ=255)

                                                                                                                        tctGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACt              <  2:1021730/140‑1 (MQ=255)

                                                                                                                        tctGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACt              <  1:718116/140‑1 (MQ=255)

                                                                                                                        tctGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACt              <  1:1201771/140‑1 (MQ=255)

                                                                                                                        tctGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACt              <  1:910193/140‑1 (MQ=255)

                                                                                                                         ctGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACt              <  1:658215/139‑1 (MQ=255)

                                                                                                                         ctGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACt              >  2:658215/1‑139 (MQ=255)

                                                                                                                          tGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTca            <  2:393668/140‑1 (MQ=255)

                                                                                                                          tGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTca            <  2:1050533/140‑1 (MQ=255)

                                                                                                                          tGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTca            <  1:1174907/140‑1 (MQ=255)

                                                                                                                          tGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTca            <  1:1219630/140‑1 (MQ=255)

                                                                                                                          tGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTca            <  1:1488090/140‑1 (MQ=255)

                                                                                                                          tGACTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTca            <  1:642780/140‑1 (MQ=255)

                                                                                                                            aCTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTcatt          >  2:1508631/1‑140 (MQ=255)

                                                                                                                            aCTTAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTcatt          >  1:182810/1‑140 (MQ=255)

                                                                                                                               tAAGTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTcattaca       <  1:417787/140‑1 (MQ=255)

                                                                                                                                  gTTCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTcattacatta    <  1:1242791/140‑1 (MQ=255)

                                                                                                                                    tCGATACTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTCAttacattaca  <  1:1157008/140‑1 (MQ=255)

ATCATTATCAGAACTCATTATAAGTCTCCTCATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATGCTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTCATTACATTACA  >  NC_000913/1803109‑1803380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`