Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,878,801	T→C	V10A (GTA→GCA)	yoaK →	putative membrane protein YoaK

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,878,801	0	T	C	100.0%	316.7 / NA	89	V10A (GTA→GCA)	yoaK	putative membrane protein YoaK
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (45/44);  total (45/44)

CGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGTAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGATTATTGTCGTACTCGGCA  >  NC_000913/1878665‑1878928                                                                                                                                         |                                                                                                                                cGATATTGTGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAAt                                                                                                                              <  1:109009/140‑1 (MQ=255) cGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAAt                                                                                                                              <  2:335743/140‑1 (MQ=255) cGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAAt                                                                                                                              <  1:136113/140‑1 (MQ=255)          gATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAAt                                                                                                                              >  1:144313/1‑131 (MQ=255)          gATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAAt                                                                                                                              <  2:144313/131‑1 (MQ=255)              tATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCg                                                                                                                 <  1:860658/140‑1 (MQ=255)              tATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCg                                                                                                                 >  2:695162/1‑140 (MQ=255)              tATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCg                                                                                                                 >  1:1219327/1‑140 (MQ=255)               aTCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCgg                                                                                                                <  1:24973/140‑1 (MQ=255)                tCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGt                                                                                                               <  2:1513300/140‑1 (MQ=255)                 cAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAAt                                                                                                                              >  1:384855/1‑124 (MQ=255)                 cAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAAt                                                                                                                              <  2:384855/124‑1 (MQ=255)                   ggAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGt                                                                                                            >  1:653143/1‑140 (MQ=255)                      gaAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTAtt                                                                                                         >  1:715283/1‑140 (MQ=255)                        aaaaaCACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTAtttt                                                                                                       >  1:978789/1‑140 (MQ=255)                           aaCACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGA‑TGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGc                                                                                                   <  1:1091079/140‑1 (MQ=255)                            acacAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGc                                                                                                   <  1:1223838/140‑1 (MQ=255)                             cacaAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCa                                                                                                  <  1:314696/140‑1 (MQ=255)                                 aaCAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGt                                                                                              <  1:382862/140‑1 (MQ=255)                                         acacCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAACCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTAtt                                                                                      <  2:1411251/140‑1 (MQ=255)                                          cacCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTg                                                                                     >  1:1148283/1‑140 (MQ=255)                                              ttttGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTggcgg                                                                                 <  2:1148283/140‑1 (MQ=255)                                               tttGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGGGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTggcggc                                                                                >  2:1335789/1‑140 (MQ=255)                                                    cgcgCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTAtgc                                                                           <  1:586677/140‑1 (MQ=255)                                                       gcATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTggcgg                                                                                 >  1:832641/1‑131 (MQ=255)                                                       gcATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTggcgg                                                                                 <  2:832641/131‑1 (MQ=255)                                                          tCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGATGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGccc                                                                      <  2:125049/139‑1 (MQ=255)                                                          tCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGATGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGccc                                                                      >  1:125049/1‑139 (MQ=255)                                                            cAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCgg                                                                   <  1:835140/140‑1 (MQ=255)                                                            cAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGATGCCCCgg                                                                   <  2:872350/140‑1 (MQ=255)                                                                 cTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCa                                                              >  1:1322196/1‑140 (MQ=255)                                                                         cTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATg                                                      >  2:1283244/1‑140 (MQ=255)                                                                         cTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATg                                                      >  1:508538/1‑140 (MQ=255)                                                                         cTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATg                                                      >  2:1387680/1‑140 (MQ=255)                                                                           gAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGCATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGaa                                                    >  1:1472458/1‑140 (MQ=255)                                                                              gCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGaaaaa                                                 >  1:571285/1‑140 (MQ=255)                                                                              gCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGaaaaa                                                 >  1:1132967/1‑140 (MQ=255)                                                                                 tATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGaaaaaaaa                                              >  1:987710/1‑139 (MQ=255)                                                                                 tATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGaaaaaaaa                                              >  2:154897/1‑139 (MQ=255)                                                                                 tATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGaaaaaaaa                                              >  2:767462/1‑139 (MQ=255)                                                                                 tATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAaac                                              >  1:1185076/1‑140 (MQ=255)                                                                                 tATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAaac                                              <  2:641214/140‑1 (MQ=255)                                                                                   ttCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAaacaa                                            >  2:472139/1‑140 (MQ=255)                                                                                   ttCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAaacaa                                            >  1:1339301/1‑140 (MQ=255)                                                                                    tCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAaacaac                                           <  1:1335789/140‑1 (MQ=255)                                                                                      acaTCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGa                                         <  2:1219327/140‑1 (MQ=255)                                                                                      acaTCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGa                                         <  2:508538/140‑1 (MQ=255)                                                                                      acaTCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGa                                         <  1:767462/140‑1 (MQ=255)                                                                                        aTCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGatt                                       <  1:494847/140‑1 (MQ=255)                                                                                        aTCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCCAAGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACCatt                                       >  2:494847/1‑140 (MQ=255)                                                                                        aTCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGG‑TTTTTATTGGCGGCTATGCTGCCCCCGGAGCATAAAGATGAAAAAAACAACGatta                                      >  1:1269788/1‑140 (MQ=255)                                                                                             tttGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATTAAAAAAACAACGATtattat                                  >  2:783815/1‑140 (MQ=255)                                                                                             tttGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGa                                         <  2:160463/133‑1 (MQ=255)                                                                                             tttGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGa                                         >  1:160463/1‑133 (MQ=255)                                                                                             tttGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATtattat                                  <  2:737138/140‑1 (MQ=255)                                                                                              ttGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGattatt                                    <  1:317736/137‑1 (MQ=255)                                                                                              ttGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGattatt                                    >  2:317736/1‑137 (MQ=255)                                                                                              ttGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGatt                                       <  2:1246836/134‑1 (MQ=255)                                                                                              ttGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGatt                                       >  1:1246836/1‑134 (MQ=255)                                                                                                gATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTatgat                               <  2:715283/140‑1 (MQ=255)                                                                                                gATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTatgat                               <  2:978789/140‑1 (MQ=255)                                                                                                    ggTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGgt                           <  2:571285/140‑1 (MQ=255)                                                                                                    ggTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGgt                           >  1:854916/1‑140 (MQ=255)                                                                                                     gTGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGgtg                          >  1:326201/1‑140 (MQ=255)                                                                                                      tGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTTTGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATAATGGgggt                         >  1:562487/1‑140 (MQ=255)                                                                                                      tGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGgtgt                         >  1:1033831/1‑140 (MQ=255)                                                                                                      tGATAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGgtgt                         >  1:1188501/1‑140 (MQ=255)                                                                                                         tAACATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATTAAAAAAACAACGATTATTATGATGGGTGTGGc                      <  1:783815/140‑1 (MQ=255)                                                                                                           aCATGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGa                    <  1:1069668/140‑1 (MQ=255)                                                                                                            cATGCGAATCGGCATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGat                   <  2:1472458/140‑1 (MQ=255)                                                                                                              tGCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGatta                 <  1:1283244/140‑1 (MQ=255)                                                                                                               gCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATtattat                                  <  2:81250/122‑1 (MQ=255)                                                                                                               gCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATtattat                                  >  1:81250/1‑122 (MQ=255)                                                                                                               gCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGgtgt                         <  1:806030/131‑1 (MQ=255)                                                                                                               gCGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGgtgt                         >  2:806030/1‑131 (MQ=255)                                                                                                                cGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGattatt               >  2:1161743/1‑140 (MQ=255)                                                                                                                cGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGattatt               >  1:201417/1‑140 (MQ=255)                                                                                                                cGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGattatt               >  1:1037036/1‑140 (MQ=255)                                                                                                                cGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAAAAACGATTATTATGATGGGTGTGGCGattatt               >  1:43085/1‑140 (MQ=255)                                                                                                                cGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCACGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGattatt               >  2:1078335/1‑140 (MQ=255)                                                                                                                cGAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGATTTTCTGTCCCGGGCGCATAAAGATGAAAAAAAAAACAAATATTATGATGGGTGTGGCGattatt               >  2:1069668/1‑140 (MQ=255)                                                                                                                 gAATCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGATTATTg              <  1:154897/140‑1 (MQ=255)                                                                                                                  aaTCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGATTATTGt             >  2:964217/1‑140 (MQ=255)                                                                                                                   aTCGGTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGATTATTGTc            >  1:778787/1‑140 (MQ=255)                                                                                                                      ggTATTATTTTTCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGATTATTGTCGTa         <  1:1150367/140‑1 (MQ=255)                                                                                                                             tttttCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGATTATTGTCGTACTCGGCa  <  2:201417/140‑1 (MQ=255)                                                                                                                             tttttCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGATTATTGTCGTACTCGGCa  <  2:1339301/140‑1 (MQ=255)                                                                                                                             tttttCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGATTATTGTCGTACTCGGCa  <  1:748244/140‑1 (MQ=255)                                                                                                                             tttttCCGGTTGCAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGATTATTGTCGTACTCGGCa  <  2:836513/140‑1 (MQ=255)                                                                                                                                         |                                                                                                                                CGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGTAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGATTATTGTCGTACTCGGCA  >  NC_000913/1878665‑1878928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑