Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,370,965	T→C	L20L (TTA→CTA)	arnT →	lipid IVA 4‑amino‑4‑deoxy‑L‑arabinosyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,370,965	0	T	C	100.0%	270.7 / NA	76	L20L (TTA→CTA)	arnT	lipid IVA 4‑amino‑4‑deoxy‑L‑arabinosyltransferase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (33/43);  total (33/43)

CGGACAAGTTGTTCGCGGAAATATTGCCGGACGTGAAGGCTGGCTGGGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGTTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCTACGTTATTTCGAAAAACCCATTGCCGG  >  NC_000913/2370833‑2371101                                                                                                                                     |                                                                                                                                         cGGACAAGTTGTTCGCGGAAATATTGCCGGACGTGAAGGCTGGCTGGGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGAt                                                                                                                                   <  2:532376/140‑1 (MQ=255)   gACAAGTTGTTCGCGGAAATATTGCCGGACGTGAAGGCTGGCTGGGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCa                                                                                                                                 >  2:802521/1‑140 (MQ=255)      aaGTTGTTCGCGGAAATATTGCCGGACGTGAAGGCTGGCTGGGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCa                                                                                                                              <  1:669497/140‑1 (MQ=255)         ttgttCGCGGAAATATTGCCGGACGTGAAGGCTGGCTGGGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCAcgc                                                                                                                           <  2:246796/140‑1 (MQ=255)           gttCGCGGAAATATTGCCGGACGTGAAGGCTGGCTGGGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGt                                                                                                                         <  2:207438/140‑1 (MQ=255)           gttCGCGGAAATATTGCCGGACGTGAAGGCTGGCTGGGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGt                                                                                                                         <  1:792150/140‑1 (MQ=255)              cgcgGAAATATTGCCGGACGTGAAGGCTGGCTGGGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTg                                                                                                                      >  1:743160/1‑140 (MQ=255)              cgcgGAAATATTGCCGGACGTGAAGGCTGGCTGGGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTg                                                                                                                      <  2:743602/140‑1 (MQ=255)                      tatTGCCGGACGTGAAGGCTGGCTGGGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCa                                                                                                              >  1:248516/1‑140 (MQ=255)                        ttGCCGGACGTGAAGGCTGGCTGGGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAAc                                                                                                            <  2:1274564/140‑1 (MQ=255)                             ggACGTGAAGGCTGGCTGGGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTATCGATCAGCACGCGTCTGCTCTGGCAACCCGAt                                                                                                       >  1:1331404/1‑140 (MQ=255)                             ggACGTGAAGGCTGGCTGGGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGAt                                                                                                       >  1:265125/1‑140 (MQ=255)                               aCGTGAAGGCTGGCTGGGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGa                                                                                                     <  2:1103577/140‑1 (MQ=255)                                cGTGAAGGCTGGCTGGGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGaa                                                                                                    <  1:626201/140‑1 (MQ=255)                                   gAAGGCTGGCTGGGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAAcg                                                                                                 >  1:1437597/1‑140 (MQ=255)                                       gctggctgGGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGtt                                                                                             <  2:1101006/140‑1 (MQ=255)                                         tggctggGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTAt                                                                                           >  2:1281902/1‑140 (MQ=255)                                          ggctggGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATg                                                                                          >  2:1053860/1‑140 (MQ=255)                                          ggctggGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTACGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATg                                                                                          >  2:1334231/1‑140 (MQ=255)                                           gctggGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGc                                                                                         >  1:155061/1‑140 (MQ=255)                                           gctggGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGc                                                                                         >  2:156084/1‑140 (MQ=255)                                           gctggGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGc                                                                                         >  2:893523/1‑140 (MQ=255)                                            ctggGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCg                                                                                        <  1:357343/140‑1 (MQ=255)                                               ggTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGaa                                                                                     >  1:1515032/1‑140 (MQ=255)                                                gTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGaaa                                                                                    >  2:815762/1‑140 (MQ=255)                                                 ttGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGa                                                                                                     <  2:1207611/122‑1 (MQ=255)                                                 ttGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGa                                                                                                     >  1:1207611/1‑122 (MQ=255)                                                 ttGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAAt                                                                                   <  1:1281902/140‑1 (MQ=255)                                                 ttGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAAt                                                                                   >  2:837339/1‑140 (MQ=255)                                                 ttGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAAt                                                                                   <  2:664577/140‑1 (MQ=255)                                                    ccAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAg                                                                                <  2:155061/140‑1 (MQ=255)                                                           aTTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGaa                                                                         >  1:724127/1‑140 (MQ=255)                                                           aTTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGaa                                                                         <  2:171675/140‑1 (MQ=255)                                                              gCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATg                                                                      <  1:1234970/140‑1 (MQ=255)                                                               cGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGc                                                                     >  1:417083/1‑140 (MQ=255)                                                                gggTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCt                                                                    <  1:1334231/140‑1 (MQ=255)                                                                gggTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCt                                                                    >  1:1423006/1‑140 (MQ=255)                                                                       cGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATcc                                                             <  2:1467527/140‑1 (MQ=255)                                                                         cTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTATCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCgg                                                           <  2:1331404/140‑1 (MQ=255)                                                                             tgaAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGAc                                                       <  2:265125/140‑1 (MQ=255)                                                                             tgaAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGAc                                                       <  2:1198271/140‑1 (MQ=255)                                                                                  tCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGAt                                                  <  1:669173/140‑1 (MQ=255)                                                                                       aCGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGc                                             <  2:724127/140‑1 (MQ=255)                                                                                        cGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGcc                                            <  1:127311/140‑1 (MQ=255)                                                                                          ttACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGcccc                                          <  2:578840/140‑1 (MQ=255)                                                                                          ttACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGcccc                                          <  1:1333455/140‑1 (MQ=255)                                                                                          ttACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGcccc                                          <  2:873607/140‑1 (MQ=255)                                                                                          ttACCTTATCGGCCTCTTCGCGTTTATTGCCT‑CTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCa                                         <  2:919332/140‑1 (MQ=255)                                                                                           tACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCa                                         <  1:1053860/140‑1 (MQ=255)                                                                                           tACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCa                                         <  1:279877/140‑1 (MQ=255)                                                                                           tACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCa                                         <  1:284562/140‑1 (MQ=255)                                                                                            aCCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCAt                                        <  2:299979/140‑1 (MQ=255)                                                                                              cTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCt                                      >  1:1002694/1‑140 (MQ=255)                                                                                                tATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGt                                    >  2:135821/1‑140 (MQ=255)                                                                                                 aTCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGtt                                   <  1:1190006/140‑1 (MQ=255)                                                                                                  tCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTa                                  >  2:52201/1‑140 (MQ=255)                                                                                                     gCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAggg                               <  1:815762/140‑1 (MQ=255)                                                                                                     gCCTCTTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGCCATCCGGCGCCTGGACTGTCCACGATCTGGTAggg                               <  2:1423006/140‑1 (MQ=255)                                                                                                       ctctTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTa                                  <  2:696905/135‑1 (MQ=255)                                                                                                       ctctTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTa                                  >  1:696905/1‑135 (MQ=255)                                                                                                       ctctTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCt                             >  1:113120/1‑140 (MQ=255)                                                                                                       ctctTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCt                             >  2:1280758/1‑140 (MQ=255)                                                                                                       ctctTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCt                             >  2:528289/1‑140 (MQ=255)                                                                                                       ctctTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCt                             >  1:932637/1‑140 (MQ=255)                                                                                                       ctctTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCt                             >  1:1097899/1‑140 (MQ=255)                                                                                                         ctTCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCTAc                           <  1:893523/140‑1 (MQ=255)                                                                                                          ttCGCGTTTATTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCTACg                          <  2:1072045/140‑1 (MQ=255)                                                                                                                   aTTGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCTACGTTATTTCGa                 >  1:604648/1‑140 (MQ=255)                                                                                                                    ttGCCTGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCTACGTTATTTCGaa                >  2:769364/1‑140 (MQ=255)                                                                                                                         tGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCTACGTTAtt                     >  1:164900/1‑130 (MQ=255)                                                                                                                         tGCTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCTACGTTAtt                     <  2:164900/130‑1 (MQ=255)                                                                                                                           cTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCTACGTTATTTCGAAAAACCCa         <  2:932637/140‑1 (MQ=255)                                                                                                                           cTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCTACGTTATTTCGAAAAACCCa         >  1:730170/1‑140 (MQ=255)                                                                                                                           cTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCTACGTTATTTCGAAAAACCCa         >  2:1168795/1‑140 (MQ=255)                                                                                                                           cTATTACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCTACGTTATTTCGAAAAACCCa         >  2:1264046/1‑140 (MQ=255)                                                                                                                              ttACCTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCTACGTTATTTCGAAAAACCCATTg      <  2:743160/140‑1 (MQ=255)                                                                                                                                 ccTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCTACGTTATTTCGAAAAACCCATTGCCg   <  1:999145/140‑1 (MQ=255)                                                                                                                                  cTGCTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCTACGTTATTTCGAAAAACCCATTGCCgg  <  1:52201/140‑1 (MQ=255)                                                                                                                                     |                                                                                                                                         CGGACAAGTTGTTCGCGGAAATATTGCCGGACGTGAAGGCTGGCTGGGTTGCCAACAAATTGCGGGTAGTCGCTGATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGTTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCTACGTTATTTCGAAAAACCCATTGCCGG  >  NC_000913/2370833‑2371101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑