| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 383,598 | (A)7→6 | coding (338/1197 nt) | yaiP ← | putative glucosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 383,592 | 0 | A | . | 97.7% | 357.6 / 2.8 | 87 | coding (344/1197 nt) | yaiP | putative glucosyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base . (47/38); total (48/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.85e-01 | |||||||||||
TGTGCGGTAACAGACCCGCGCCTTTCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTTAAAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGACCGCTTCGGTATTGT > NC_000913/383458‑383727 | tgtgCGGTAACAGACCCGCGCCTTTCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTTaaaaaa < 2:295979/140‑1 (MQ=255) gtgCGGTAACAGACCCGCGCCTTTCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTTaaaaaac < 1:541396/140‑2 (MQ=255) tgCGGTAACAGACCCGCGCCTTTCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTTaaaaaacc < 2:312987/140‑3 (MQ=255) gTAACAGACCCGCGCCTTTCAACGCAGTAGAGGTAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGt < 1:1005845/140‑1 (MQ=255) aCAGACCCGCGCCTTTCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGc > 2:919141/1‑140 (MQ=255) aGACCCGCGCCTTTCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAg < 2:157263/140‑1 (MQ=255) gACCCGCGCCTTTCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAgg < 1:997548/140‑1 (MQ=255) cccGCGCCTTTCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTg > 2:1220735/1‑140 (MQ=255) ccGCGCCTTTCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTgg > 2:268841/1‑140 (MQ=255) cgcgCCTTTCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGc < 1:268841/140‑1 (MQ=255) gcgcCTTTCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCg < 2:33170/140‑1 (MQ=255) gcgcCTTTCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCg > 1:456922/1‑140 (MQ=255) cgcCTTTCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGt > 1:618284/1‑140 (MQ=255) ccTTTCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTaa > 1:209423/1‑140 (MQ=255) tCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGa < 1:618023/140‑1 (MQ=255) tCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGa < 1:557628/140‑1 (MQ=255) tCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGa < 1:947628/140‑1 (MQ=255) tCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGa < 2:127841/140‑1 (MQ=255) tCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGa < 2:860240/140‑1 (MQ=255) aaCGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAgg < 1:707348/140‑1 (MQ=255) aaCGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAgg < 2:419361/140‑1 (MQ=255) aGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTTAAAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCAt > 2:1169589/1‑140 (MQ=255) aGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCAtt > 2:189500/1‑140 (MQ=255) aGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCAtt > 2:1284374/1‑140 (MQ=255) tAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCa > 2:512058/1‑136 (MQ=255) tAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCa < 1:512058/136‑1 (MQ=255) tAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATtca > 2:1119896/1‑140 (MQ=255) agGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATtcatca > 1:1310051/1‑140 (MQ=255) ggAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAgc > 2:1018953/1‑140 (MQ=255) aaTGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAgcgc < 1:1284374/140‑1 (MQ=255) aTGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGca > 2:1316770/1‑140 (MQ=255) aTGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGca < 1:1018953/140‑1 (MQ=255) tGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAACCCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGcac < 2:196299/140‑1 (MQ=255) tGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGcac > 2:85221/1‑140 (MQ=255) gccgccTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAgcgc > 2:1275151/1‑137 (MQ=255) gccgccTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAgcgc < 1:1275151/137‑1 (MQ=255) gccgccTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGcacc > 1:542620/1‑140 (MQ=255) gccgccTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGcacc > 1:567413/1‑140 (MQ=255) cgccTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCG‑AATTGAGGCCATTCATCAGCGcac > 1:345394/1‑136 (MQ=255) cgccTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCG‑AATTGAGGCCATTCATCAGCGcac < 2:345394/136‑1 (MQ=255) gccTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCaccacc > 1:8536/1‑140 (MQ=255) ggCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTAtt > 1:259388/1‑140 (MQ=255) cgcgCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGAAttttttt > 1:1042853/1‑140 (MQ=255) gcgcTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTg > 1:1151127/1‑140 (MQ=255) cgcTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGc < 2:456922/140‑1 (MQ=255) cgcTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACACAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGc > 2:885459/1‑140 (MQ=255) cATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCg < 2:1107538/140‑1 (MQ=255) tataGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCCCCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGt < 2:1042853/140‑1 (MQ=255) cATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCa > 1:46753/1‑140 (MQ=255) aTTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCAt > 2:469916/1‑140 (MQ=255) aTTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCAt > 1:1158649/1‑140 (MQ=255) aTTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCAt > 2:126663/1‑140 (MQ=255) ttCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCAtt > 2:1177477/1‑140 (MQ=255) tCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCAttt > 2:971412/1‑140 (MQ=255) tCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCAttt > 2:718624/1‑140 (MQ=255) tCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCAttt > 2:644171/1‑140 (MQ=255) ccGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGcaacaa < 2:792257/123‑1 (MQ=255) ccGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGcaacaa > 1:792257/1‑123 (MQ=255) gTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCg > 1:1160613/1‑140 (MQ=255) tCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGt > 1:725454/1‑140 (MQ=255) tCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGt > 1:1385945/1‑140 (MQ=255) tCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGt > 1:650516/1‑140 (MQ=255) tCTTGATCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGt > 2:161628/1‑140 (MQ=255) tCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACt < 2:1158649/140‑1 (MQ=255) tCGGGCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACt < 1:677733/140‑1 (MQ=255) gCGGAACATAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCg > 1:504503/1‑140 (MQ=255) aTAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCTCCTTTACCGGTATTTTTTTGCGTGACGTCAACAAAGCGGCCGCCCCATTTGCTTTTGGCGTCCGCCATGAc < 2:674749/140‑1 (MQ=255) aTAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGAc < 2:1310051/140‑1 (MQ=255) aTAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGAc < 1:455338/140‑1 (MQ=255) aTAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGAc < 1:718624/140‑1 (MQ=255) aTAGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGAc < 1:1220735/140‑1 (MQ=255) aTAGGTGTCGGCATCACTT‑AAAAAACCTGATCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGAc < 1:745517/140‑1 (MQ=255) tAGGTGTCGGCATCACTTAAAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGAc < 1:1169589/140‑1 (MQ=255) aGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGACCg < 1:522105/140‑1 (MQ=255) aGGTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGACCg < 1:919141/140‑1 (MQ=255) ggTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTA‑TTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGAc < 1:116355/136‑1 (MQ=255) ggTGTCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTA‑TTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGAc > 2:116355/1‑136 (MQ=255) gtCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGACCGCTTc < 1:62534/140‑1 (MQ=255) tCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACt < 1:465498/122‑1 (MQ=255) tCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACt > 2:465498/1‑122 (MQ=255) tCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGACCGCTTCg < 2:1160613/140‑1 (MQ=255) tCGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGACCGCTTCg > 1:125708/1‑140 (MQ=255) cGGCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGACCGCTTCgg > 2:1220214/1‑140 (MQ=255) ggCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGACCGCTTCGGt > 2:7009/1‑140 (MQ=255) ggCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGACCGCTTCGGt > 1:695386/1‑140 (MQ=255) ggCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGACCGCTTCGGt > 1:997156/1‑140 (MQ=255) gCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCCCCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGACCGCTTCGGTa < 2:695386/140‑1 (MQ=255) gCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGACCGCTTCGGTa < 1:184903/140‑1 (MQ=255) gCATCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGACCGCTTCGGTa < 1:971412/140‑1 (MQ=255) aTCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGAc > 2:1124501/1‑128 (MQ=255) aTCACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGAc < 1:1124501/128‑1 (MQ=255) cACTT‑AAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGACCGCTTCGGTATTGt > 2:1398085/1‑140 (MQ=255) | TGTGCGGTAACAGACCCGCGCCTTTCAACGCAGTAGAGGGAATGCCGCCTACGGCATCGGCACCGCGCTCAATTTCTGCCAGCATATAGCCCATTCCGTCTTGATCGGGCGGAACATAGGTGTCGGCATCACTTAAAAAAACCTGGTCGCAGGTGGCGTAATTGAGGCCATTCATCAGCGCACCACCTTTACCGGTATTTTTTTGCGTGACGGCAACAAAGCGGTCGCCCCATTTGCGTTTGACTTCCGCCATGACCGCTTCGGTATTGT > NC_000913/383458‑383727 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |