Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,856,604	(A)6→5	coding (190/450 nt)	yidI →	putative inner membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,856,599	0	A	.	100.0%	258.8 / NA	60	coding (185/450 nt)	yidI	putative inner membrane protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (30/30);  total (30/30)

TCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTG  >  NC_000913/3856461‑3856728                                                                                                                                           |                                                                                                                                  tCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTAGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGaa                                                                                                                                  >  1:223870/1‑140 (MQ=255)       ccATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGaaaaatta                                                                                                                            <  2:491462/140‑4 (MQ=255)        cATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGaaaaattac                                                                                                                           >  1:41218/1‑136 (MQ=255)        cATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGaaaaattac                                                                                                                           >  2:758799/1‑136 (MQ=255)          tCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTacca                                                                                                                        >  2:448501/1‑140 (MQ=255)          tCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTacca                                                                                                                        >  1:359789/1‑140 (MQ=255)          tCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTacca                                                                                                                        <  2:692905/140‑1 (MQ=255)            gCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTaccacc                                                                                                                      <  2:1154525/140‑1 (MQ=255)            gCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTaccacc                                                                                                                      <  1:78296/140‑1 (MQ=255)                  atgatgGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGgag                                                                                                                >  1:601998/1‑140 (MQ=255)                   tgatgGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGgaga                                                                                                               <  2:707683/140‑1 (MQ=255)                     atgGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGaaa                                                                                                             >  1:934489/1‑140 (MQ=255)                       ggggATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGaaaaa                                                                                                           >  2:714173/1‑140 (MQ=255)                        gggATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGaaaaaa                                                                                                          >  1:38255/1‑140 (MQ=255)                         ggATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAag                                                                                                         <  1:1085174/140‑1 (MQ=255)                           aTTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAagag                                                                                                       <  1:1288075/140‑1 (MQ=255)                            ttATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAgg                                                                                                      >  1:928372/1‑140 (MQ=255)                               tCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACg                                                                                                   <  1:714173/140‑1 (MQ=255)                                  aCTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAg                                                                                                <  2:359789/140‑1 (MQ=255)                                      ttCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGt                                                                                            >  1:225075/1‑140 (MQ=255)                                             ggCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATaaa                                                                                     >  2:588970/1‑140 (MQ=255)                                             ggCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATaaa                                                                                     >  1:623076/1‑140 (MQ=255)                                                ccTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATc                                                                                  <  1:758799/140‑1 (MQ=255)                                                   ttCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCtc                                                                               >  1:409352/1‑140 (MQ=255)                                                           accaccGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAg                                                                       >  1:40984/1‑140 (MQ=255)                                                           accaccGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAg                                                                       <  2:40984/140‑1 (MQ=255)                                                           accaccGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAg                                                                       <  2:934489/140‑1 (MQ=255)                                                             caccGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATc                                                                                  <  2:1023938/127‑1 (MQ=255)                                                             caccGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATc                                                                                  >  1:1023938/1‑127 (MQ=255)                                                                cGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTa                                                                  >  2:889706/1‑140 (MQ=255)                                                                  ccAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATc                                                                >  2:815968/1‑140 (MQ=255)                                                                      cGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGTTGTCGATAAAATCCTCAATCAAAGCGGTATCGCAc                                                            >  1:954281/1‑140 (MQ=255)                                                                       gTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACt                                                           <  2:409352/140‑1 (MQ=255)                                                                          tGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGc                                                        <  2:871301/140‑1 (MQ=255)                                                                               gCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATtg                                                   <  1:588970/140‑1 (MQ=255)                                                                               gCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATtg                                                   <  1:815968/140‑1 (MQ=255)                                                                                 aTCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATtgct                                                 >  1:851222/1‑140 (MQ=255)                                                                                   cGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCGCTGTCCATtgctgc                                               >  2:860059/1‑140 (MQ=255)                                                                                   cGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATtgctgc                                               >  2:359404/1‑140 (MQ=255)                                                                                    gTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTgcg                                              <  2:41218/140‑1 (MQ=255)                                                                                    gTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTgcg                                              <  2:851222/140‑1 (MQ=255)                                                                                         ggACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACt                                         <  1:41851/140‑1 (MQ=255)                                                                                           aCAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACttt                                       <  1:282810/140‑1 (MQ=255)                                                                                           aCAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACttt                                       >  1:976312/1‑140 (MQ=255)                                                                                                     tGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTAt                             >  1:1313375/1‑140 (MQ=255)                                                                                                       aaaTTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTg                           <  1:889706/140‑1 (MQ=255)                                                                                                        aaTTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTgg                          <  2:928372/140‑1 (MQ=255)                                                                                                        aaTTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTgg                          <  1:1027742/140‑1 (MQ=255)                                                                                                        aaTTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTgg                          <  2:976312/140‑1 (MQ=255)                                                                                                            aaaaGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGt                      <  2:601998/140‑1 (MQ=255)                                                                                                            aaaaGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGt                      <  2:1313375/140‑1 (MQ=255)                                                                                                            aaaaGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGt                      <  1:1022368/140‑1 (MQ=255)                                                                                                            aaaaGAGGTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATAGGCGGt                      <  2:623076/140‑1 (MQ=255)                                                                                                                   gTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGt                      >  1:1118133/1‑133 (MQ=255)                                                                                                                   gTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGt                      <  2:1118133/133‑1 (MQ=255)                                                                                                                   gTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTa               >  1:604679/1‑140 (MQ=255)                                                                                                                   gTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTAAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGt                      <  1:444732/133‑1 (MQ=255)                                                                                                                   gTCTTCTCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTAAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGt                      >  2:444732/1‑133 (MQ=255)                                                                                                                    tcttctCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTaa              >  2:436793/1‑140 (MQ=255)                                                                                                                    tcttctCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTaa              >  2:229003/1‑140 (MQ=255)                                                                                                                      ttctCGCCGGAATAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAgg            >  2:1207065/1‑140 (MQ=255)                                                                                                                                aaTAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTg  >  1:29632/1‑140 (MQ=255)                                                                                                                                aaTAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTg  >  1:261495/1‑140 (MQ=255)                                                                                                                                aaTAAAAGGCG‑AAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTg  >  1:1253227/1‑140 (MQ=255)                                                                                                                                           |                                                                                                                                  TCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTG  >  NC_000913/3856461‑3856728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑