Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,801,128 (G)5→6 coding (872/1017 nt) waaJ ← UDP‑glucose:(glucosyl)LPS alpha‑1,2‑glucosyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,801,1231.G100.0% 464.6 / NA 126W293R (TGG→CGG) waaJUDP‑glucose:(glucosyl)LPS alpha‑1,2‑glucosyltransferase
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base G (59/67);  total (59/67)

Only 100 of 133 total aligned reads displayed.

TTACGGTAATATTTTCGGCAAAGATAACAGACTCCTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCA‑GGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGTATAATGAATAAGAAGAGTACTTTCTGTAATCAGCTTTTTATAGTTTTGATGT  >  NC_000913/3800987‑3801256
                                                                                                                                         |                                                                                                                                     
ttACGGTAATATTTTCGGCAAAGATAACAGACTCCTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCA‑ggg                                                                                                                                    <  1:721991/140‑1 (MQ=255)
      tAATATTTTCGGCAAAGATAACAGACTCCTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCA‑ggggggaat                                                                                                                              >  1:969656/1‑136 (MQ=255)
      tAATATTTTCGGCAAAGATAACAGACTCCTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCA‑ggggggaat                                                                                                                              >  1:1378542/1‑136 (MQ=255)
         tatTTTCGGCAAAGATAACAGACTCCTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAAtttt                                                                                                                            >  1:839409/1‑140 (MQ=255)
         tatTTTCGGCAAAGATAACAGACTCCTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAAtttt                                                                                                                            >  2:192394/1‑140 (MQ=255)
           ttttCGGCAAAGATAACAGACTCCTGCTATAATTCCTGAGATATAATGATGTTGCACCAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCt                                                                                                                          <  2:1340681/140‑1 (MQ=255)
             ttCGGCAAAGATAACAGACTCCTGCTATAATTCCTGTGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTaa                                                                                                                        <  2:501713/140‑1 (MQ=255)
             ttCGGCAAAGATAACAGACTCCTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTaa                                                                                                                        <  1:182316/140‑1 (MQ=255)
              tCGGCAAAGATAACAGACTCCTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTaaa                                                                                                                       >  1:338157/1‑140 (MQ=255)
                ggCAAAGATAACAGACTCCTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGc                                                                                                                     >  1:389292/1‑140 (MQ=255)
                  cAAAGATAACAGACTCCTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTa                                                                                                                   <  1:159446/140‑1 (MQ=255)
                    aaGATAACAGACTCCTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTAtt                                                                                                                 >  1:565306/1‑140 (MQ=255)
                       aTAACAGACTCCTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTta                                                                                                              <  1:400291/140‑1 (MQ=255)
                       aTAACAGACTCCTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTta                                                                                                              <  2:452167/140‑1 (MQ=255)
                       aTAACAGACTCCTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTta                                                                                                              <  2:565306/140‑1 (MQ=255)
                              aCTCCTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTAtt                                                                                                       >  1:704612/1‑140 (MQ=255)
                                tCCTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGTGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTAtttt                                                                                                     >  2:1267059/1‑140 (MQ=255)
                                tCCTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAg                                                                                                                      <  2:148863/123‑1 (MQ=255)
                                tCCTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTAtttt                                                                                                     >  2:1122815/1‑140 (MQ=255)
                                 ccTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAg                                                                                                                      >  1:1397767/1‑122 (MQ=255)
                                 ccTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAg                                                                                                                      <  2:1397767/122‑1 (MQ=255)
                                  cTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTAc                                                                                                   >  2:371101/1‑140 (MQ=255)
                                   tGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTtat                                                                                                             >  1:119011/1‑129 (MQ=255)
                                   tGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTtat                                                                                                             <  2:119011/129‑1 (MQ=255)
                                   tGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTAcc                                                                                                  <  2:1378542/140‑1 (MQ=255)
                                   tGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTAcc                                                                                                  <  2:1258364/140‑1 (MQ=255)
                                   tGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTAcc                                                                                                  >  1:253214/1‑140 (MQ=255)
                                       ataATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATg                                                                                              <  1:1242692/140‑1 (MQ=255)
                                          aTTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGAt                                                                                           >  2:196728/1‑140 (MQ=255)
                                          aTTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGAt                                                                                           >  1:1085736/1‑140 (MQ=255)
                                             ccTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATaaa                                                                                        >  1:984985/1‑140 (MQ=255)
                                               tGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGTAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAAtt                                                                                      >  1:98479/1‑140 (MQ=255)
                                               tGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAAtt                                                                                      >  2:1041018/1‑140 (MQ=255)
                                               tGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAAtt                                                                                      >  1:477423/1‑140 (MQ=255)
                                                  gaTATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGcc                                                                                   <  1:1041018/140‑1 (MQ=255)
                                                     ataATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCAt                                                                                <  2:27889/140‑1 (MQ=255)
                                                     ataATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATATTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCAt                                                                                >  2:1163421/1‑140 (MQ=255)
                                                      taATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCAtt                                                                               <  2:839409/140‑1 (MQ=255)
                                                           atgTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGc                                                                          <  2:185748/140‑1 (MQ=255)
                                                           atgTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGc                                                                          <  2:938653/140‑1 (MQ=255)
                                                            tgTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGc                                                                          >  2:688831/1‑139 (MQ=255)
                                                             gTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGcc                                                                                   <  1:87997/129‑1 (MQ=255)
                                                             gTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGcc                                                                                   >  2:87997/1‑129 (MQ=255)
                                                             gTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCa                                                                        >  1:647577/1‑140 (MQ=255)
                                                             gTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCa                                                                        >  2:799274/1‑140 (MQ=255)
                                                             gTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCa                                                                        >  2:813247/1‑140 (MQ=255)
                                                             gTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCa                                                                        >  1:26603/1‑140 (MQ=255)
                                                             gTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCa                                                                        <  1:1122815/140‑1 (MQ=255)
                                                              ttGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCAc                                                                       <  2:883198/140‑1 (MQ=255)
                                                               tGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACg                                                                      >  1:1116276/1‑140 (MQ=255)
                                                                 cACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGt                                                                    <  2:338157/140‑1 (MQ=255)
                                                                 cACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGt                                                                    >  2:1313292/1‑140 (MQ=255)
                                                                 cACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGt                                                                    >  2:754322/1‑140 (MQ=255)
                                                                 cACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGt                                                                    >  1:419778/1‑140 (MQ=255)
                                                                 cACTAAAAGATGCTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTg                                                                                     >  2:399849/1‑123 (MQ=255)
                                                                   cTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCa                                                                        <  2:443399/134‑1 (MQ=255)
                                                                      aaaGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCGTCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGt                                                               >  1:482966/1‑140 (MQ=255)
                                                                      aaaGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGt                                                               >  1:402121/1‑140 (MQ=255)
                                                                      aaaGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGt                                                               <  2:477423/140‑1 (MQ=255)
                                                                      aaaGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATATTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGt                                                               <  1:1163421/140‑1 (MQ=255)
                                                                        aGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTg                                                             <  2:1324890/140‑1 (MQ=255)
                                                                        aGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTg                                                             <  2:402121/140‑1 (MQ=255)
                                                                         gATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGc                                                            <  1:813247/140‑1 (MQ=255)
                                                                           tGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGt                                                               <  2:716511/135‑1 (MQ=255)
                                                                           tGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGt                                                               >  1:716511/1‑135 (MQ=255)
                                                                           tGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTg                                                             <  2:507817/137‑1 (MQ=255)
                                                                           tGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTg                                                             >  1:507817/1‑137 (MQ=255)
                                                                           tGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCAc                                                          <  2:883596/140‑1 (MQ=255)
                                                                           tGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCAc                                                          <  2:578191/140‑1 (MQ=255)
                                                                           tGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCAc                                                          >  2:960863/1‑140 (MQ=255)
                                                                           tGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCAc                                                          >  2:967972/1‑140 (MQ=255)
                                                                           tGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCAc                                                          <  1:573490/140‑1 (MQ=255)
                                                                           tGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCAc                                                          <  1:361965/140‑1 (MQ=255)
                                                                           tGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCAc                                                          <  1:1256584/140‑1 (MQ=255)
                                                                           tGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCAc                                                          <  1:1313292/140‑1 (MQ=255)
                                                                           tGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCAc                                                          >  1:141035/1‑140 (MQ=255)
                                                                           tGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCAc                                                          <  1:196728/140‑1 (MQ=255)
                                                                           tGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCAc                                                          <  1:305137/140‑1 (MQ=255)
                                                                            gTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCAcc                                                         >  1:902293/1‑140 (MQ=255)
                                                                                atatCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGt                                                               <  1:1130768/130‑1 (MQ=255)
                                                                                atatCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGta                                                     <  1:180838/140‑1 (MQ=255)
                                                                                  atCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGtata                                                   <  1:482579/140‑1 (MQ=255)
                                                                                   tcattttttAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGTATaa                                                  <  2:857599/137‑1 (MQ=255)
                                                                                   tCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGTATaa                                                  <  2:241850/140‑1 (MQ=255)
                                                                                   tCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGTATaa                                                  <  1:390832/140‑1 (MQ=255)
                                                                                   tCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGTATaa                                                  <  1:391447/140‑1 (MQ=255)
                                                                                       tttttAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCa                                                           <  1:219589/127‑1 (MQ=255)
                                                                                        ttttAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGTATAATGAAt                                             <  1:678453/140‑1 (MQ=255)
                                                                                                  aataatTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGTATAATGAATAAGAAGAGTa                                   >  1:671625/1‑140 (MQ=255)
                                                                                                   ataatTGATTTCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGTATAATGAATAAGAAGAGTAc                                  <  2:231380/140‑1 (MQ=255)
                                                                                                            ttCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGTATAATGAATaaga                                         >  2:1199539/1‑124 (MQ=255)
                                                                                                            ttCGCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGTATAATGAATAAGAAGAGTACTTTCTGTaa                         >  2:630794/1‑140 (MQ=255)
                                                                                                               gCATCTCGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGTATAATGAATAAGAAGAGTACTTTCTGTAATCa                      <  1:754322/140‑1 (MQ=255)
                                                                                                                     cGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGTATAATGAATAAGAAGAGTACTTTTTGTAATCAGCtttt                <  2:1259048/140‑1 (MQ=255)
                                                                                                                     cGTGGAGAGTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGTATAATGAATAAGAAGAGTACTTTCTGTAATCAGCtttt                >  1:231248/1‑140 (MQ=255)
                                                                                                                          agagTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGTATAATGAATAAGAAGAGTACTTTCTGTAATCAGCTTTTTATAg           <  2:231248/140‑1 (MQ=255)
                                                                                                                           gagTCATCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGTATAATGAATAAGAAGAGTACTTTCTGTAATCAGCTTTTTATAGt          >  2:1086553/1‑140 (MQ=255)
                                                                                                                                aTCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGTATAATGAATAAGAAGAGTACTTTCTGTAATCAGCt                   <  1:362390/126‑1 (MQ=255)
                                                                                                                                 tCTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGTATAATGAATAAGAAGAGTACTTTCTGTAATCAGCTTTTTATAGTTTTGAt    <  1:878082/140‑1 (MQ=255)
                                                                                                                                  cTTTCCAGGGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGTATAATGAATAAGAAGAGTACTTTCTGTAATCAGCTTTTTATAGTTTTGAtg   <  2:313649/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                     
TTACGGTAATATTTTCGGCAAAGATAACAGACTCCTGCTATAATTCCTGAGATATAATGATGTTGCACTAAAAGATGTTTATATCTTTTTTTAAATTCAATAATTGATTTCGCATCTCGTGGAGAGTCATCTTTCCA‑GGGGGAATTTTCTAAAGCTATTTTATAGTATTTTACCGATGGATAAATTGCCCATTTGTGCCACGGTTTAGTTGCACCTGTATAATGAATAAGAAGAGTACTTTCTGTAATCAGCTTTTTATAGTTTTGATGT  >  NC_000913/3800987‑3801256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑