| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 380,022 | (G)10→11 | intergenic (‑141/+47) | frmR ← / ← yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 380,012 | 1 | . | G | 80.0% | 200.3 / 44.5 | 70 | intergenic (‑131/+57) | frmR/yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO |
| Reads supporting (aligned to +/- strand): ref base . (8/6); new base G (42/14); total (50/20) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.73e-01 | |||||||||||
GGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACC > NC_000913/379877‑380146 | ggCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑gggg > 1:1180815/1‑140 (MQ=255) gcatgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGaa > 2:1030191/1‑140 (MQ=255) catgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAgg < 2:1151887/140‑1 (MQ=255) tgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AACCGCCAGGGAAGgc > 1:14468/1‑140 (MQ=255) caATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGgccc > 1:224607/1‑139 (MQ=255) aaTATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGgccgcc > 1:1304157/1‑140 (MQ=255) aGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAgc > 1:1213576/1‑140 (MQ=255) gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAgcgg > 1:94973/1‑140 (MQ=255) gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAgcgg > 2:476965/1‑140 (MQ=255) gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAgcggg > 2:1007240/1‑140 (MQ=255) gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAgcggg < 2:1304157/140‑1 (MQ=255) gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGG‑G‑GG‑GG‑C‑T‑AATCAGCAGGGAAGGCCGCCCCGGATAgcggg > 2:602440/1‑140 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAgcgggg > 1:766407/1‑139 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAgcgggc > 2:109109/1‑140 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAgcgggc > 2:931372/1‑140 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑A‑AATCGGCAGGGAAGGCCCCCCCGGAAAgggggg > 2:898234/1‑139 (MQ=255) tATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGggcggc > 2:1192525/1‑140 (MQ=255) tATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGggcggc > 1:355758/1‑140 (MQ=255) ttCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAg > 1:718509/1‑140 (MQ=255) ttCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGa < 1:1007240/140‑1 (MQ=255) gTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGAAAGGCCGCCCCGGAAAGCGGGCGGCAGAAGGAATc > 2:355378/1‑140 (MQ=255) cAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAg > 1:519269/1‑140 (MQ=255) cAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAg > 2:1144652/1‑140 (MQ=255) cAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAg > 2:931092/1‑140 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAt > 2:568123/1‑140 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCCCCCCGGAAAGCGGGCGGCAGAAGGAATCAGAAt > 1:145990/1‑140 (MQ=255) aTACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGGGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTc < 2:718509/140‑1 (MQ=255) ccccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGG‑G‑GGTGG‑C‑T‑AATCGGAAGGGAGGGCCGCCCGGGCAAGCGGGGGGCAGAAGGAATTGGAATTTCCAg > 2:197604/1‑140 (MQ=255) ccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGt > 2:761933/1‑140 (MQ=255) ccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGt > 1:964989/1‑140 (MQ=255) tataGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGa < 1:109109/140‑1 (MQ=255) gTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACggg < 2:519269/140‑1 (MQ=255) tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGAc < 2:469355/136‑1 (MQ=255) tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGc > 2:663114/1‑140 (MQ=255) tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCCCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGAc > 1:469355/1‑136 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTg > 1:260971/1‑140 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTg > 1:70103/1‑140 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTg > 1:607147/1‑140 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTg > 2:1220384/1‑140 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCCCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGCCAGACGGGCTg > 2:255776/1‑140 (MQ=255) tataACACTGGAGAATAAAATTATTCCGGTGAGTGTGGTGGGAAAAAAACAAGGAA‑G‑‑GGGGGCG‑GG‑GG‑CGT‑AAGCTGCAGAGAAGGCCGCGCCGGATAGCGGGCGGCAGAAGGAAACAGAAATTCCAGGTCAGACGGGCt < 2:252326/140‑1 (MQ=255) aaCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AGGGGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCa > 1:252326/1‑140 (MQ=255) aaCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCaa > 2:669859/1‑140 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACggg < 2:1300570/132‑1 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACggg > 1:1300570/1‑132 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGt > 2:697180/1‑140 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGt > 2:766343/1‑140 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGt > 2:894805/1‑140 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AGGGGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCCCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTg > 2:59401/1‑140 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGTTAGCGGGCGGCAGAAGGAATAAGAATTTCCAGGTCAGCCGGGCTGCAGGTTGc > 2:895485/1‑140 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc > 2:27196/1‑140 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc > 1:735220/1‑140 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc > 1:956050/1‑140 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa > 2:230056/1‑140 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAACGAGGAA‑A‑‑GGGGG‑G‑GG‑GG‑C‑TAAATAGGAAGGGAAGGCCGCCCCGGATAGCGGGGGGAAGAAGGAATGAGAATTTCAAGGTCAGACGGCCTGCAAGTGGCAg > 2:521997/1‑140 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc < 2:665286/131‑1 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc > 1:665286/1‑131 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAg > 1:52318/1‑140 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAg < 1:663114/140‑1 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGAAAGTTGCAg > 1:513687/1‑140 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGG‑G‑GGCGG‑C‑T‑AACCGGCAGGGAAGTGCCCCCCGGATGGGGGGCGGGAGAAGGGATCAGATTTTCATGGTCGGTCTGGCGGGATGTTGCAg > 2:557176/1‑140 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGa > 1:1317032/1‑140 (MQ=255) aaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCTGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTa < 2:956050/140‑1 (MQ=255) aaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTa < 2:70103/140‑1 (MQ=255) aTCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatca > 1:492398/1‑140 (MQ=255) ccGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatcatc < 2:607147/140‑1 (MQ=255) ccGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa > 1:1215243/1‑123 (MQ=255) ccGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa < 2:1215243/123‑1 (MQ=255) gAATGTGGTCGGAAAACAAAGAGGAAGG‑‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTg < 2:681651/140‑1 (MQ=255) tgtgGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTgggg < 2:260971/140‑1 (MQ=255) gtgGTCGGAAAACAAAGAGGAA‑A‑‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgtg < 1:230056/140‑1 (MQ=255) tgGTCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgtg < 1:568123/140‑1 (MQ=255) tgGTCGGAAAACAAAGAGGAA‑A‑‑GGGGG‑GTGG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgtg < 2:1180815/140‑1 (MQ=255) ggTCGGAAAACAAAGAGGAA‑A‑‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTc > 2:1095845/1‑140 (MQ=255) tCGGAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCg < 1:931092/140‑1 (MQ=255) gcGGAAAACAAAGAGGAA‑A‑‑GGGGG‑G‑GG‑GGTC‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCg < 1:895485/139‑1 (MQ=255) gAAAACAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAc > 2:351502/1‑140 (MQ=255) aaaCAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACca < 1:894805/140‑1 (MQ=255) aaaCAAAGAGGAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACca < 1:1220384/140‑1 (MQ=255) aaaaggggaa‑ag‑gggGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATGGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTCCcaccc < 2:224607/139‑3 (MQ=255) ggAA‑AG‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTAcc > 2:600719/1‑140 (MQ=255) | GGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGG‑G‑GG‑GG‑C‑T‑AATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACC > NC_000913/379877‑380146 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |