Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,876,158	C→T	N162N (AAC→AAT)	nimT →	2‑nitroimidazole exporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,876,158	0	C	T	100.0%	280.6 / NA	80	N162N (AAC→AAT)	nimT	2‑nitroimidazole exporter
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (39/41);  total (39/41)

TAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAACGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTCGCGCGCCTTACATA  >  NC_000913/1876022‑1876282                                                                                                                                          |                                                                                                                             tAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGt                                                                                                                           <  2:424102/140‑1 (MQ=255)  aGGCAATGTCTTCCTGCCAGGATTAATTAAACGCGTTTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGtt                                                                                                                          >  2:25460/1‑140 (MQ=255)  aGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGtt                                                                                                                          <  2:551134/140‑1 (MQ=255)   ggCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTATGAATGGttt                                                                                                                         >  2:861694/1‑140 (MQ=255)        tGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACTGGGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTtggc                                                                                                                     >  2:869064/1‑140 (MQ=255)        tGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTtggct                                                                                                                    >  1:776450/1‑140 (MQ=255)        tGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTtggct                                                                                                                    >  1:700594/1‑140 (MQ=255)        tGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTtggct                                                                                                                    >  2:1021423/1‑140 (MQ=255)        tGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTtggct                                                                                                                    >  1:672082/1‑140 (MQ=255)        tGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTtggct                                                                                                                    >  2:1165348/1‑140 (MQ=255)        tGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATAGTCGTGCCGCTGGCTTTGAATGGTTTtggct                                                                                                                    >  1:189514/1‑140 (MQ=255)             tACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCaa                                                                                                               >  2:1253288/1‑140 (MQ=255)              aCTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAg                                                                                                              <  2:672082/140‑1 (MQ=255)                  ccAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGgcgc                                                                                                          <  1:267277/140‑1 (MQ=255)                    aGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGcgcg                                                                                                         <  1:921232/139‑1 (MQ=255)                    aGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGcgcg                                                                                                         >  2:921232/1‑139 (MQ=255)                    aGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGt                                                                                                        >  1:1264471/1‑140 (MQ=255)                       attaattaAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGc                                                                                                     <  1:1021423/140‑1 (MQ=255)                         taattaaACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTc                                                                                                   <  2:242356/140‑1 (MQ=255)                         taattaaACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTc                                                                                                   >  1:1255098/1‑140 (MQ=255)                               aaCGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTg                                                                                             <  2:27983/140‑1 (MQ=255)                                aCGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGa                                                                                            >  2:336753/1‑140 (MQ=255)                                      tttCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGtt                                                                                      <  1:25460/140‑1 (MQ=255)                                        tCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGtttt                                                                                    <  1:260609/140‑1 (MQ=255)                                                            cTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCttttttt                                                                <  2:1255098/140‑1 (MQ=255)                                                               aCCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATg                                                             >  1:1190445/1‑140 (MQ=255)                                                               aCCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATg                                                             >  1:829391/1‑140 (MQ=255)                                                                 cGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGc                                                           <  1:1315338/140‑1 (MQ=255)                                                                   gcgcATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTg                                                         <  2:1118032/140‑1 (MQ=255)                                                                    cgcATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGc                                                        <  2:1023491/140‑1 (MQ=255)                                                                    cgcATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTACCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGc                                                        >  2:641678/1‑140 (MQ=255)                                                                     gcATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTAt                                                              <  2:994929/133‑1 (MQ=255)                                                                     gcATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTAt                                                              >  1:994929/1‑133 (MQ=255)                                                                      cATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCca                                                      <  1:336753/140‑1 (MQ=255)                                                                           tCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTg                                                 <  1:1165348/140‑1 (MQ=255)                                                                             ccTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGc                                               <  1:558174/140‑1 (MQ=255)                                                                             ccTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGc                                               <  1:1253288/140‑1 (MQ=255)                                                                             ccTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGATTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGc                                               <  1:558441/140‑1 (MQ=255)                                                                              cTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCg                                              <  2:776450/140‑1 (MQ=255)                                                                               tGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGa                                             >  1:130621/1‑140 (MQ=255)                                                                                gACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGaa                                            >  2:1045951/1‑140 (MQ=255)                                                                                     tGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTcaa                                       >  1:726618/1‑140 (MQ=255)                                                                                     tGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTcaa                                       >  1:1041419/1‑140 (MQ=255)                                                                                      gggAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTcaa                                       <  1:1048638/139‑1 (MQ=255)                                                                                      gggAGCTGCAGCGGCACT‑GGGATCGGATATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTcaa                                       >  2:1048638/1‑139 (MQ=255)                                                                                       ggAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTcaaca                                     >  2:447373/1‑140 (MQ=255)                                                                                       ggAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTcaaca                                     >  1:1114860/1‑140 (MQ=255)                                                                                        gAGCTGCAGCGGCACTGGGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTcaaca                                     <  1:869064/140‑1 (MQ=255)                                                                                         aGCTGCAGCGGCACG‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCaacaac                                   <  1:1045951/140‑1 (MQ=255)                                                                                            tGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATg                                >  1:646843/1‑140 (MQ=255)                                                                                             gCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGTTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGc                                               <  1:819883/124‑1 (MQ=255)                                                                                             gCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGc                                               >  2:819883/1‑124 (MQ=255)                                                                                              cAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCa                              <  2:700594/140‑1 (MQ=255)                                                                                              cAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCa                              <  2:556571/140‑1 (MQ=255)                                                                                              cAGCGGCACT‑GGGATCGGCTATAGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCa                              <  2:189514/140‑1 (MQ=255)                                                                                                              cGGCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTcg               <  2:1114860/140‑1 (MQ=255)                                                                                                               ggCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTcgc              >  1:240801/1‑140 (MQ=255)                                                                                                               ggCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTcgc              >  1:133660/1‑140 (MQ=255)                                                                                                               ggCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTcgc              >  2:914518/1‑140 (MQ=255)                                                                                                                gCTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTcgcg             <  1:70477/140‑1 (MQ=255)                                                                                                                 cTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTcgcgc            <  2:1190445/140‑1 (MQ=255)                                                                                                                 cTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTcgcgc            <  2:130621/140‑1 (MQ=255)                                                                                                                 cTATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTcgcgc            <  2:240801/140‑1 (MQ=255)                                                                                                                  tATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTcgcgcg           <  1:1019954/140‑1 (MQ=255)                                                                                                                  tATGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTcgcgcg           <  1:861694/140‑1 (MQ=255)                                                                                                                   aTGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTCgcgcgc          <  1:914518/140‑1 (MQ=255)                                                                                                                   aTGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTCgcgcgc          <  2:646843/140‑1 (MQ=255)                                                                                                                    tGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTcgc              >  2:771010/1‑135 (MQ=255)                                                                                                                    tGGTCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACACGCAAATTTGAGTACCTcgc              <  1:771010/135‑1 (MQ=255)                                                                                                                       tCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTCGCGCGCCTTa      <  1:1353607/140‑1 (MQ=255)                                                                                                                       tCGTGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTCGCGCGCCTTa      <  2:942400/140‑1 (MQ=255)                                                                                                                          tGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTCgcgcgc          >  2:71921/1‑133 (MQ=255)                                                                                                                          tGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTCgcgcgc          <  1:71921/133‑1 (MQ=255)                                                                                                                          tGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTCGCGCGCCTTACAt   >  1:1334378/1‑140 (MQ=255)                                                                                                                          tGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTCGCGCGCCTTACAt   >  1:683022/1‑140 (MQ=255)                                                                                                                          tGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTCGCGCGCCTTACAt   >  1:986102/1‑140 (MQ=255)                                                                                                                          tGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTCGCGCGCCTTACAt   >  2:553987/1‑140 (MQ=255)                                                                                                                          tGCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTCGCGCGCCTTACAt   >  2:510065/1‑140 (MQ=255)                                                                                                                           gCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTCGCGCGCCTTACATa  >  2:230576/1‑140 (MQ=255)                                                                                                                           gCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTCGCGCGCCTTACATa  >  1:394354/1‑140 (MQ=255)                                                                                                                           gCCGCTGGCTTTGAATGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTCGCGCGCCTTACATa  >  2:359491/1‑140 (MQ=255)                                                                                                                                          |                                                                                                                             TAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACT‑GGGATCGGCTATGGTCGTGCCGCTGGCTTTGAACGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTCGCGCGCCTTACATA  >  NC_000913/1876022‑1876282

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑