Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 268,466 T→C G165G (GGA→GGG)  ykfA ← CP4‑6 prophage; putative GTP‑binding protein YkfA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913268,4660TC100.0% 316.6 / NA 88G165G (GGA→GGG) ykfACP4‑6 prophage; putative GTP‑binding protein YkfA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (43/45);  total (43/45)

ATCCGCTCGGCCATCACCTTAAGCCCCCATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGTCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATAAAAATGTTCATCCACCGTCAGCGCCCGGTCATCGGCCTTAATCAGC  >  NC_000913/268332‑268601
                                                                                                                                      |                                                                                                                                       
atcCGCTCGGCCATCACCTTAAGCCCCCATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGcccccc                                                                                                                                    <  2:166488/140‑1 (MQ=255)
atcCGCTCGGCCATCACCTTAAGCCCCCATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGcccccc                                                                                                                                    <  2:675814/140‑1 (MQ=255)
 tcCGCTCGGCCATCACCTTAAGCCCCCATTGTAGACGGACCGACACAGCACACACCGGCTGGACGGGCTGGAACAGCCCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCa                                                                                                                                   >  2:1161284/1‑140 (MQ=255)
  ccGCTCGGCCATCACCTTAAGCCCCCATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGTAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCAc                                                                                                                                  <  1:294357/140‑1 (MQ=255)
    gCTCGGCCATCACCTTAAGCCCCCATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCg                                                                                                                                >  1:332342/1‑140 (MQ=255)
    gCTCGGCCATCACCTTAAGCCCCCATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCg                                                                                                                                >  1:1125580/1‑140 (MQ=255)
    gCTCGGCCATCACCTTAAGCCCCCATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCGGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCg                                                                                                                                >  2:1230880/1‑140 (MQ=255)
      tCGGCCATCACCTTAAGCCCCCATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCt                                                                                                                              >  1:407309/1‑140 (MQ=255)
             tcgccTTAAGCCCCCATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGCACAGATCATGCAGCAGGCAGATTTTGCGGATGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGt                                                                                                                       <  2:1037975/137‑1 (MQ=25)
             tCACCTTAAGCCCCCATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGt                                                                                                                       <  2:682817/140‑1 (MQ=255)
                 cTTAAGCCCCCATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCgg                                                                                                                   <  2:332342/140‑1 (MQ=255)
                    aaGCCCCCATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCTGTGGACAACTGCCCCCCACCGCTGGTAGGt                                                                                                                       <  1:982684/133‑1 (MQ=255)
                    aaGCCCCCATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCTGTGGACAACTGCCCCCCACCGCTGGTAGGt                                                                                                                       >  2:982684/1‑133 (MQ=255)
                    aaGCCCCCATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCt                                                                                                                >  1:1045834/1‑140 (MQ=255)
                    aaGCCCCCATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCt                                                                                                                >  1:967825/1‑140 (MQ=255)
                     aGCCCCCATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCtt                                                                                                               <  2:1125580/140‑1 (MQ=255)
                        ccccATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATc                                                                                                            >  1:812481/1‑140 (MQ=255)
                           cATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCTCCCCACCGCTGGTAGGTTCGGCCTTATCCGa                                                                                                         >  2:509139/1‑140 (MQ=255)
                           cATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGa                                                                                                         >  2:1309124/1‑140 (MQ=255)
                           cATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGa                                                                                                         >  1:100350/1‑140 (MQ=255)
                            aTTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGAc                                                                                                        <  2:812481/140‑1 (MQ=255)
                                tAGACGGACCGACACAGCACACACCGGATGGACGTGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGc                                                                                                    <  1:1028327/140‑1 (MQ=255)
                                     ggACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATa                                                                                               >  2:1255738/1‑140 (MQ=255)
                                      gACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATaa                                                                                              <  2:407309/140‑1 (MQ=255)
                                      gACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATaa                                                                                              >  2:812646/1‑140 (MQ=255)
                                      gACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATaa                                                                                              <  1:509139/140‑1 (MQ=255)
                                      gACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATaa                                                                                              >  1:877105/1‑140 (MQ=255)
                                       aCCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGa                                                                                                         <  2:477000/128‑1 (MQ=255)
                                       aCCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGa                                                                                                         >  1:477000/1‑128 (MQ=255)
                                       aCCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATaac                                                                                             >  2:420754/1‑140 (MQ=255)
                                       aCCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATaa                                                                                              <  1:1016600/139‑1 (MQ=255)
                                       aCCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATaa                                                                                              >  2:1016600/1‑139 (MQ=255)
                                       aCCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCATGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATaac                                                                                             >  2:718321/1‑140 (MQ=255)
                                        ccGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATaaca                                                                                            >  1:1272088/1‑140 (MQ=255)
                                          gACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATaacaaa                                                                                          >  2:792413/1‑140 (MQ=255)
                                          gACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATaacaaa                                                                                          >  2:1279165/1‑140 (MQ=255)
                                             acaGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAg                                                                                       <  2:956086/140‑1 (MQ=255)
                                             acaGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAg                                                                                       <  2:876877/140‑1 (MQ=255)
                                                 cacacaCCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCAcc                                                                                   >  1:595329/1‑140 (MQ=255)
                                                  acacacCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCt                                                                                  <  1:1230880/140‑1 (MQ=255)
                                                    acacCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTa                                                                                <  2:996668/140‑1 (MQ=255)
                                                    acacCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTa                                                                                <  1:1134877/140‑1 (MQ=255)
                                                    acacCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTa                                                                                <  2:599891/140‑1 (MQ=255)
                                                    acacCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTa                                                                                <  1:1255738/140‑1 (MQ=255)
                                                     cacCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTAt                                                                               <  2:797100/140‑1 (MQ=255)
                                                      acCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTAt                                                                               >  1:595198/1‑139 (MQ=255)
                                                      acCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTAt                                                                               <  2:595198/139‑1 (MQ=255)
                                                      acCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATg                                                                              <  1:1024568/140‑1 (MQ=255)
                                                      acCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATg                                                                              >  1:1268803/1‑140 (MQ=255)
                                                      acCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATg                                                                              >  2:174010/1‑140 (MQ=255)
                                                         ggATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCg                                                                           <  1:1289087/140‑1 (MQ=255)
                                                          gATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGTTATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCgg                                                                          >  1:857791/1‑140 (MQ=255)
                                                          gATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCgg                                                                          <  1:124459/140‑1 (MQ=255)
                                                           aTGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGt                                                                         >  2:911513/1‑140 (MQ=255)
                                                           aTGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGt                                                                         >  1:1267669/1‑140 (MQ=255)
                                                            tGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGta                                                                        <  2:1268803/140‑1 (MQ=255)
                                                              gACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGtata                                                                      >  2:465484/1‑140 (MQ=255)
                                                              gACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTAGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGtata                                                                      >  1:1333672/1‑140 (MQ=255)
                                                               aCGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATAc                                                                     <  2:100350/140‑1 (MQ=255)
                                                                 gggCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACct                                                                   <  1:1309124/140‑1 (MQ=255)
                                                                        aaCAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAAt                                                            <  2:459194/140‑1 (MQ=255)
                                                                             cTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACct                                                                   >  2:1369666/1‑128 (MQ=255)
                                                                             cTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACct                                                                   <  1:1369666/128‑1 (MQ=255)
                                                                             cTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCt                                                       <  1:420754/140‑1 (MQ=255)
                                                                             cTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCt                                                       >  2:71988/1‑140 (MQ=255)
                                                                             cTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCt                                                       <  2:376762/140‑1 (MQ=255)
                                                                             cTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCt                                                       <  1:1279165/140‑1 (MQ=255)
                                                                             cTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCATGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCt                                                       <  1:718321/140‑1 (MQ=255)
                                                                                 tGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAAt                                                            >  1:71037/1‑131 (MQ=255)
                                                                                 tGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAAt                                                            <  2:71037/131‑1 (MQ=255)
                                                                                    agcagGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATa                                                <  1:812646/140‑1 (MQ=255)
                                                                                      caggcagATTTTGCGGCTGATCTTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATaaa                                              <  2:1272088/140‑1 (MQ=255)
                                                                                      caggcagATTTTGCGGCTGATATTCTGCTACTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATaaa                                              <  1:1271403/140‑1 (MQ=255)
                                                                                       aggcagATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATaaaa                                             >  1:173357/1‑140 (MQ=255)
                                                                                        ggcagATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATaaaaa                                            >  2:909169/1‑140 (MQ=255)
                                                                                        ggcagATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATaaaaa                                            <  1:1161284/140‑1 (MQ=255)
                                                                                          cagATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATAAAAATg                                          <  2:773717/140‑1 (MQ=255)
                                                                                                  gCGGCTGATATCCTGCTTCTGCGCCGTGGACAACTGCCCCCCGCCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATAAAAATGTTCATCCa                                  <  2:327110/140‑1 (MQ=255)
                                                                                                      cTGATATTCTGCTTCTGCGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATAAAAATGTTCATCCACCGt                              <  1:71988/140‑1 (MQ=255)
                                                                                                               tgcttctgcGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATAAAAATGTTCATCCACCGTCAGCGCCCg                     >  1:953602/1‑140 (MQ=255)
                                                                                                                gcttctgcGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATAAAAATGTTCATCCACCGTCAGCGCCCgg                    >  1:1225768/1‑140 (MQ=255)
                                                                                                                gcttctgcGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATAAAAATGTTCATCCACCGTCAGCGCCCgg                    >  1:727757/1‑140 (MQ=255)
                                                                                                                gcttctgcGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATAAAAATGTTCATCCACCGTCAGCGCCCgg                    >  1:1289691/1‑140 (MQ=255)
                                                                                                                   tctgcGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATAAAAATGTTCATCCACCGTCAGCGCCCGGTCa                 >  1:52941/1‑140 (MQ=255)
                                                                                                                   tctgcGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATAAAAATGTTCATCCACCGTCAGCGCCCGGTCa                 <  2:877105/140‑1 (MQ=255)
                                                                                                                   tctgcGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATAAAAATGTTCATCCACCGTCAGCGCCCGGTCa                 >  2:931423/1‑140 (MQ=255)
                                                                                                                    ctgcGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATAAAAATGTTCATCCACCGTCAGCGCCCGGTCAt                <  1:792413/140‑1 (MQ=255)
                                                                                                                    ctgcGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATAAAAATGTTCATCCACCGTCAGCGCCCGGTCAt                <  1:909169/140‑1 (MQ=255)
                                                                                                                    ctgcGCCGTGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATAAAAATGTTCATCCACCGTCAGCGCCCGGTCAt                >  2:517014/1‑140 (MQ=255)
                                                                                                                            tGGACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATAAAAATGTTCATCCACCGTCAGCGCCCGGTCATCGGCCTTa        >  1:407960/1‑140 (MQ=255)
                                                                                                                              gACAACTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATAAAAATGTTCATCCACCGTCAGCGCCCGGTCATCGGCCTTAAt      <  1:517014/140‑1 (MQ=255)
                                                                                                                                  aCTGCCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATAAAAATGTTCATCCACCGTCAGCGCCCGGTCATCGGCCTTAATCAGc  <  2:953602/140‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                       
ATCCGCTCGGCCATCACCTTAAGCCCCCATTGTAGACGGACCGACACAGCACACACCGGATGGACGGGCTGGAACAGCTCATGCAGCAGGCAGATTTTGCGGCTGATATTCTGCTTCTGCGCCGTGGACAACTGTCCCCCACCGCTGGTAGGTTCGGCCTTATCCGACTGGCTGATAACAAACAGCACCTTATGCCGGTATACCTCTCCAATCACCTGATGATAAAAATGTTCATCCACCGTCAGCGCCCGGTCATCGGCCTTAATCAGC  >  NC_000913/268332‑268601

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑