Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,656,399 C→T intergenic (‑41/+137) pepB ← / ← iscX aminopeptidase B/accessory iron‑sulfur cluster assembly protein IscX

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,656,3990CT98.4% 220.0 / NA 63intergenic (‑41/+137)pepB/iscXaminopeptidase B/accessory iron‑sulfur cluster assembly protein IscX
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base T (34/28);  total (35/28)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TGCCGTCATTATTAATGCTGTAAGTTGCTTTTTCTCCCCAGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGCCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTGGGGTGAACGAGCGCAGCCAACGCATCTGCGGCGTGAAGCATGACGCG  >  NC_000913/2656268‑2656531
                                                                                                                                   |                                                                                                                                    
tGCCGTCATTATTAATGCTGTAAGTTGCTTTTTCTCCCCAGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGAtt                                                                                                                             >  1:261313/1‑140 (MQ=255)
     tCATTATTAATGCTGTAAGTTGCTTTTTCTCCCCAGCGCTCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTc                                                                                                                         >  1:280070/1‑140 (MQ=255)
       attattAATGCTGTAAGTTGCTTTTTCTCCCCAGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAATGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCg                                                                                                                       >  2:666279/1‑140 (MQ=255)
       attattAATGCTGTAAGTTGCTTTTTCTCCCCAGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCg                                                                                                                       >  2:1396179/1‑140 (MQ=255)
                 cTGTAAGTTGCTTTTTCTCCCCAGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGAtt                                                                                                             >  1:1027474/1‑140 (MQ=255)
                   gTAAGTTGCTTTTTCTCCCCAGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTcg                                                                                                           >  1:1396360/1‑140 (MQ=255)
                   gTAAGTTGCTTTTTCTCCCCAGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTcg                                                                                                           >  2:204757/1‑140 (MQ=255)
                   gTAAGTTGCTTTTTCTCCCCAGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTcg                                                                                                           <  1:591449/140‑1 (MQ=255)
                   gTAAGTTGCTTTTTCTCCCCAGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTCGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTcg                                                                                                           <  1:557654/140‑1 (MQ=255)
                      aGTTGCTTTTTCTCCCCAGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGt                                                                                                        <  1:994299/140‑1 (MQ=255)
                      aGTTGCTTTTTCTCCCCAGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGt                                                                                                        <  1:1175737/140‑1 (MQ=255)
                        ttGCTTTTTCTCCCCAGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTg                                                                                                      >  2:1156900/1‑140 (MQ=255)
                          gCTTTTTCTCCCCAGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCa                                                                                                    <  2:1396360/140‑1 (MQ=255)
                           cTTTTTCTCCCCAGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAg                                                                                                   >  1:1363845/1‑140 (MQ=255)
                           cTTTTTCTCCCCAGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAg                                                                                                   >  1:266933/1‑140 (MQ=255)
                                    cccAGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTcg                                                                                                           >  1:133459/1‑123 (MQ=255)
                                    cccAGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTcg                                                                                                           <  2:133459/123‑1 (MQ=255)
                                       aGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAag                                                                                       <  2:1363845/140‑1 (MQ=255)
                                       aGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAag                                                                                       <  2:1027474/140‑1 (MQ=255)
                                       aGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAag                                                                                       >  2:789320/1‑140 (MQ=255)
                                         cgcgcgTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAagtg                                                                                     <  1:1130989/140‑1 (MQ=255)
                                         cgcgcgTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAagtg                                                                                     >  2:1280412/1‑140 (MQ=255)
                                         cgcgcgTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAagtg                                                                                     >  2:836465/1‑140 (MQ=255)
                                         cgcgcgTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAagtg                                                                                     >  1:772480/1‑140 (MQ=255)
                                            tcgTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAagtgagt                                                                                  <  2:280070/139‑1 (MQ=255)
                                             cgTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAagtgagtg                                                                                 <  2:283995/140‑1 (MQ=255)
                                              gTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAATGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAgtgagtga                                                                                <  1:666279/140‑1 (MQ=255)
                                                   cAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGccc                                                                           <  2:266933/140‑1 (MQ=255)
                                                   cAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGccc                                                                           >  2:705562/1‑140 (MQ=255)
                                                    aGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGcccc                                                                          <  1:204757/140‑1 (MQ=255)
                                                        tGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGa                                                                      <  1:1156900/140‑1 (MQ=255)
                                                          ggTAGAGGGGGTAATCTTCATCTCTTCTGTCATTTTAGTTATCCTTCTTTGTAAACGGGCCGCCAGTTGGCAGCCCCAGGATTTTTCCGCTAAATGATTCGCTTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGc                                                                    >  2:210976/1‑140 (MQ=255)
                                                          ggTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGc                                                                    <  2:477782/140‑1 (MQ=255)
                                                          ggTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGc                                                                    <  1:225246/140‑1 (MQ=255)
                                                             agagagGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATa                                                                 <  2:803526/140‑1 (MQ=255)
                                                                    gTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCa                                                                         >  2:732193/1‑125 (MQ=255)
                                                                    gTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCa                                                                         <  1:732193/125‑1 (MQ=255)
                                                                    gTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATa                                                                 >  2:1283750/1‑133 (MQ=255)
                                                                    gTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATa                                                                 <  1:1283750/133‑1 (MQ=255)
                                                                    gTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACt                                                          >  1:629977/1‑140 (MQ=255)
                                                                     tAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCa                                                                   >  2:1331526/1‑130 (MQ=255)
                                                                     tAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCa                                                                   <  1:1331526/130‑1 (MQ=255)
                                                                     tAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCa                                                                   >  2:87415/1‑130 (MQ=255)
                                                                     tAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCa                                                                   <  1:87415/130‑1 (MQ=255)
                                                                          ttCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGa                                                    <  2:629977/140‑1 (MQ=255)
                                                                               cGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTggg                                               >  2:686536/1‑140 (MQ=255)
                                                                                   tCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGNNCGCCAGTTGGCAGTCCCAGGATTTTTGCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTGGGGTGa                                           >  1:326659/1‑140 (MQ=255)
                                                                                   tCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTGGGGTGa                                           >  1:8434/1‑140 (MQ=255)
                                                                                    cTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTGGGGTGaa                                          >  1:481311/1‑140 (MQ=255)
                                                                                        cATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTGGGGTGAACGAg                                      <  1:686536/140‑1 (MQ=255)
                                                                                          ttttAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTGGGGTGAACGAgcg                                    <  1:279725/140‑1 (MQ=255)
                                                                                                   tCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTGGGGTGAACGAGCGCAGCCAACg                           >  2:932577/1‑140 (MQ=255)
                                                                                                     cttcttTGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTGGGGTGAACGAGCGCAGCCAACGCa                         >  2:253599/1‑140 (MQ=255)
                                                                                                           tGTAAAAGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTGGGGTGAACGAGCGCAGCCAACGCATCTgcg                   <  2:481311/140‑1 (MQ=255)
                                                                                                                 aGGGCCGCCAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTGGGGTGAACGAGCGCAGCCAACGCATCTGCGGCGTGa             >  2:279377/1‑140 (MQ=255)
                                                                                                                     ccgccAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTGGGGTGAACGAGCGCAGCCAACGCATCTGCGGCGTGAAGCa         >  2:205452/1‑140 (MQ=255)
                                                                                                                     ccgccAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTGGGGTGAACGAGCGCAGCCAACGCATCTGCGGCGTGAAGCa         >  2:1328999/1‑140 (MQ=255)
                                                                                                                     ccgccAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTGGGGTGAACGAGCGCAGCCAACGCATCTGCGGCGTGAAGCa         >  2:1322531/1‑140 (MQ=255)
                                                                                                                       gccAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTGGGGTGAACGAGCGCAGCCAACGCATCTGCGGCGTGAAGCATg       >  2:704144/1‑140 (MQ=255)
                                                                                                                        ccAGTTGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTGGGGTGAACGAGCGCAGCCAACGCATCTGCGGCGTGAAGCATGa      >  2:785818/1‑140 (MQ=255)
                                                                                                                            ttGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTGGGGTGAACGAGCGCAGCCAACGCATCTGCGGCGt               <  2:808530/127‑1 (MQ=255)
                                                                                                                            ttGGCAGTCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTGGGGTGAACGAGCGCAGCCAACGCATCTGCGGCGt               >  1:808530/1‑127 (MQ=255)
                                                                                                                            ttGGCAGTCCCAGGATTATTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTGGGGTGAACGAGCGCAGCCAACGCATCTGCGGCGTGAAGCATGAcgcg  <  2:1244449/140‑1 (MQ=255)
                                                                                                                                   |                                                                                                                                    
TGCCGTCATTATTAATGCTGTAAGTTGCTTTTTCTCCCCAGCGCGCGTCGGCAGGTTGGGTAGAGAGGGTAATCTTCATCGCTTCTGTCATTTTAGTTATCCTTCTTTGTAAAAGGGCCGCCAGTTGGCAGCCCCAGGATTTTTCCGCTAAATGATTCGCGTTGCAGGAAGGCGGCAAGTGAGTGAAGCCCCAGGAGCATAGATAACTATGTGACTGGGGTGAACGAGCGCAGCCAACGCATCTGCGGCGTGAAGCATGACGCG  >  NC_000913/2656268‑2656531

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: