| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,450,397 | T→C | M44V (ATG→GTG) | rpsS ← | 30S ribosomal subunit protein S19 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,450,397 | 0 | T | C | 98.0% | 350.9 / ‑3.1 | 99 | M44V (ATG→GTG) | rpsS | 30S ribosomal subunit protein S19 |
| Reads supporting (aligned to +/- strand): ref base T (0/2); new base C (47/50); total (47/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTTTATCAGCAGCGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACGTGGCATGGCTTA > NC_000913/3450265‑3450532 | ttttATCAGCAGCGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGa > 2:794273/1‑140 (MQ=255)ttttATCAGCAGCGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGa < 2:275237/140‑1 (MQ=255) gcagcGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCTAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGa > 2:1086853/1‑136 (MQ=255) gcagcGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGa < 1:1086853/136‑1 (MQ=255) agcGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACTAACCATTTCCTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTg < 2:1252108/140‑1 (MQ=255) agcGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGaaa > 1:803828/1‑132 (MQ=255) agcGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGaaa < 2:803828/132‑1 (MQ=255) agcGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTg > 1:1086003/1‑140 (MQ=255) gcGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGa < 2:818908/140‑1 (MQ=255) cGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGaa > 1:1132564/1‑140 (MQ=255) cGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGaa > 2:186000/1‑140 (MQ=255) cGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGaa > 1:1072983/1‑140 (MQ=255) cGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGaa > 1:722603/1‑140 (MQ=255) tGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAacg < 2:1132564/140‑1 (MQ=255) gCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAacgac < 1:946855/140‑1 (MQ=255) aTAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGAcc < 2:1086003/140‑1 (MQ=255) aGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCa > 2:304418/1‑140 (MQ=255) aGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCa > 2:938897/1‑140 (MQ=255) tCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAgg < 1:1164903/140‑1 (MQ=255) ggTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCa > 1:330737/1‑128 (MQ=255) ggTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCa < 2:330737/128‑1 (MQ=255) ggTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAgggg > 1:191998/1‑140 (MQ=255) ggTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAgggg > 2:147404/1‑140 (MQ=255) ggTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAgg > 2:1030858/1‑138 (MQ=255) ggTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAgg < 1:1030858/138‑1 (MQ=255) tGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGct > 2:422148/1‑140 (MQ=255) tGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGct > 2:1197418/1‑140 (MQ=255) tGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGct > 1:111234/1‑140 (MQ=255) aaTTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGcttctt < 1:304418/140‑1 (MQ=255) gtgACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCa < 1:470295/140‑1 (MQ=255) gtgACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCa < 2:703723/140‑1 (MQ=255) accaaccaTTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCg < 1:3414/140‑1 (MQ=255) accaaccaTTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCg > 1:1376326/1‑140 (MQ=255) ccaaccaTTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGc < 2:446500/140‑1 (MQ=255) ccaaccaTTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGc < 1:1143161/140‑1 (MQ=255) caaccaTTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCt < 2:721748/140‑1 (MQ=255) caaccaTTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCt < 2:583421/140‑1 (MQ=255) accaTTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCttt > 2:66033/1‑140 (MQ=255) accaTTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCttt > 2:522502/1‑140 (MQ=255) accaTTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCttt > 1:305189/1‑140 (MQ=255) accaTTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCttt > 1:444743/1‑140 (MQ=255) cgtcgGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTAcc > 2:843728/1‑140 (MQ=255) cgtcgGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTAcc < 2:722603/140‑1 (MQ=255) ggTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACcttct < 2:84799/140‑1 (MQ=255) ggTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACcttct < 2:35414/140‑1 (MQ=255) ggTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACcttct < 1:938897/140‑1 (MQ=255) gTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACcttctt > 1:174560/1‑140 (MQ=255) gTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACcttctt > 2:548808/1‑140 (MQ=255) gTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACcttctt > 1:1232692/1‑140 (MQ=255) tACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCa > 2:621881/1‑140 (MQ=255) cAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGc < 2:444743/140‑1 (MQ=255) cAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGc < 1:794273/140‑1 (MQ=255) aCCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTg < 2:1113697/140‑1 (MQ=255) aCCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTg < 2:1376326/140‑1 (MQ=255) aCCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTg < 2:174560/140‑1 (MQ=255) cGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACcttct > 1:864868/1‑128 (MQ=255) cGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACcttct < 2:864868/128‑1 (MQ=255) cGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTg < 2:715020/138‑1 (MQ=255) cGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTg > 1:715020/1‑138 (MQ=255) cGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCa > 1:361063/1‑140 (MQ=255) cGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCa > 1:1335009/1‑140 (MQ=255) ggAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAg > 1:886779/1‑140 (MQ=255) gAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTg > 1:465756/1‑136 (MQ=255) gAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTg < 2:465756/136‑1 (MQ=255) aaCGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGt > 1:1017490/1‑140 (MQ=255) aCGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGc > 2:194052/1‑129 (MQ=255) aCGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGc < 1:194052/129‑1 (MQ=255) aCGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTc > 1:123826/1‑140 (MQ=255) cGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCa < 2:1335009/140‑1 (MQ=255) tGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGt > 1:390283/1‑136 (MQ=255) tGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGt < 2:390283/136‑1 (MQ=255) tGACGACCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATaaa < 1:522502/140‑1 (MQ=255) gacCATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGa < 1:843728/140‑1 (MQ=255) cATTATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCt > 1:295645/1‑140 (MQ=255) ttATGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCttt > 1:1288322/1‑140 (MQ=255) aTGGACAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCt < 1:536066/140‑1 (MQ=255) aCAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTgag < 1:422148/140‑1 (MQ=255) cAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTgaga < 1:621881/140‑1 (MQ=255) cAGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTgaga < 2:191998/140‑1 (MQ=255) aGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTgagag > 2:236791/1‑140 (MQ=255) aGCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTgagag > 1:730259/1‑140 (MQ=255) gCGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTgagaga > 1:1207980/1‑140 (MQ=255) cGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGaa > 2:441292/1‑140 (MQ=255) cGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGaa > 1:1037491/1‑140 (MQ=255) cGATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGaa > 2:1266050/1‑140 (MQ=255) gATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAAc < 2:111234/140‑1 (MQ=255) gATGGTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGCGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAAc < 2:1288322/140‑1 (MQ=255) gTCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACGTgg > 2:23062/1‑140 (MQ=255) tCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACGTGGc < 2:1037491/140‑1 (MQ=255) tCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACGTGGc < 1:1266050/140‑1 (MQ=255) tCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACGTGGc < 2:166924/140‑1 (MQ=255) tCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACGTGGc < 2:886779/140‑1 (MQ=255) tCAAACCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACGTGGc < 1:147404/140‑1 (MQ=255) aCCGATCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACGTGGCATgg > 2:1111704/1‑140 (MQ=255) aTCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACGTGGCATGGCTTa < 2:933609/140‑1 (MQ=255) aTCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACGTGGCATGGCTTa < 2:305189/140‑1 (MQ=255) aTCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACGTGGCATGGCTTa < 2:730259/140‑1 (MQ=255) aTCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACGTGGCATGGCTTa < 1:1111704/140‑1 (MQ=255) tCACGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACg < 1:86548/127‑1 (MQ=255) | TTTTATCAGCAGCGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACGTGGCATGGCTTA > NC_000913/3450265‑3450532 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |