Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,000,660	Δ1 bp	coding (316/2259 nt)	xdhA →	putative xanthine dehydrogenase molybdenum‑binding subunit XdhA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,000,658	0	C	.	100.0%	329.4 / NA	76	coding (314/2259 nt)	xdhA	putative xanthine dehydrogenase molybdenum‑binding subunit XdhA
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base . (40/36);  total (40/36)

GGAAGATGTGCCTGATATTCCATTCGCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGGCCCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCACCAATCCATAACGGTGGCAATTTACTG  >  NC_000913/3000521‑3000791                                                                                                                                          |                                                                                                                                      ggAAGATGTGCCTGATATTCCATTCGCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGGccg                                                                                                                                     >  1:874936/1‑139 (MQ=255)     gATGTGCCTGATATTCCATTCGCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGAt                                                                                                                                <  1:329152/140‑1 (MQ=255)        gtgCCTGATATTCCATTCGCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGaa                                                                                                                             >  2:725628/1‑140 (MQ=255)          gCCTGATATTCCATTCGCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACt                                                                                                                           <  2:3037/140‑1 (MQ=255)           ccTGATATTCCATTCGCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACt                                                                                                                           >  1:1093956/1‑139 (MQ=255)           ccTGATATTCCATTCGCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACt                                                                                                                           <  2:1093956/139‑1 (MQ=255)           ccTGATATTCCATTCGCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTc                                                                                                                          >  2:1089856/1‑140 (MQ=255)           ccTGATATTCCATTCGCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTc                                                                                                                          >  2:934208/1‑140 (MQ=255)             tGATTTCCCTTTCGCTAAAGCTGGCCTCGCGTGGCCGGTTAACAAAAACAGCCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCAc                                                                                                                        <  2:566220/140‑1 (MQ=255)             tGATATTCCATTCGCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCAc                                                                                                                        >  2:997401/1‑140 (MQ=255)               atatTCCATTCGCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACgg                                                                                                                      >  1:1038113/1‑140 (MQ=255)                tatTCCATTCGCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGc                                                                                                                     >  2:78075/1‑140 (MQ=255)                tatTCCATTCGCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGc                                                                                                                     >  2:989267/1‑140 (MQ=255)                      aTTCGCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGaaaa                                                                                                               >  1:536214/1‑140 (MQ=255)                        tCGCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAg                                                                                                             >  1:579327/1‑140 (MQ=255)                        tCGCTACAGCCGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCCCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAg                                                                                                             >  1:285447/1‑140 (MQ=255)                         cGCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAgc                                                                                                            >  2:252108/1‑140 (MQ=255)                          gCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAgcg                                                                                                           >  1:518052/1‑140 (MQ=255)                          gCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAgcg                                                                                                           >  1:502419/1‑140 (MQ=255)                           cTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAgcgg                                                                                                          >  1:211745/1‑140 (MQ=255)                           cTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAgcgg                                                                                                          <  2:955473/140‑1 (MQ=255)                            tACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAgcggc                                                                                                         >  1:693840/1‑140 (MQ=255)                                gCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCaa                                                                                                     <  1:368742/140‑1 (MQ=255)                                gCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCaa                                                                                                     <  1:725628/140‑1 (MQ=255)                                gCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCaa                                                                                                     <  1:767907/140‑1 (MQ=255)                                    ggCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTgg                                                                                                 >  1:453381/1‑140 (MQ=255)                                     gCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGt                                                                                                <  1:233126/140‑1 (MQ=255)                                          ccTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCa                                                                                           <  2:502419/140‑1 (MQ=255)                                          ccTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCa                                                                                           <  1:934208/140‑1 (MQ=255)                                           cTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGgcgc                                                                                                       >  2:834842/1‑127 (MQ=255)                                           cTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGgcgc                                                                                                       <  1:834842/127‑1 (MQ=255)                                              gACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGa                                                                                       >  2:466406/1‑140 (MQ=255)                                              gACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGa                                                                                       <  1:997401/140‑1 (MQ=255)                                               acacTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAg                                                                                      >  1:478151/1‑140 (MQ=255)                                                  cTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTgg                                                                                   <  2:211745/140‑1 (MQ=255)                                                   ttGACGAAAACAAGCGCGATCCCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGc                                                                                  >  2:662880/1‑140 (MQ=255)                                                   ttGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGc                                                                                  >  2:847339/1‑140 (MQ=255)                                                   ttGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGc                                                                                  <  1:973223/140‑1 (MQ=255)                                                   ttGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGc                                                                                  <  1:252108/140‑1 (MQ=255)                                                   ttGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGc                                                                                  >  1:67959/1‑140 (MQ=255)                                                         aaaaCAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAAt                                                                            <  1:847339/140‑1 (MQ=255)                                                           aaCAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAATTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTa                                                                          <  2:351260/140‑1 (MQ=255)                                                            aCAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTAc                                                                         <  2:432016/140‑1 (MQ=255)                                                            aCAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTAc                                                                         <  2:478151/140‑1 (MQ=255)                                                            aCAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTAc                                                                         <  1:1084036/140‑1 (MQ=255)                                                            aCAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTAc                                                                         <  2:1038113/140‑1 (MQ=255)                                                                 cgcgATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGtt                                                                    >  2:760235/1‑140 (MQ=255)                                                                     aTACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATca                                                                >  2:92097/1‑140 (MQ=255)                                                                                cgcgCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGaa                                                     <  2:518052/140‑1 (MQ=255)                                                                                 gcgcACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAg                                                    <  2:693840/140‑1 (MQ=255)                                                                                      cTGCTACCTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAgcggcg                                               <  1:771040/140‑1 (MQ=255)                                                                                      cTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAgcggcg                                               <  2:453381/140‑1 (MQ=255)                                                                                       tGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGgcgc                                              <  1:78075/140‑1 (MQ=255)                                                                                         cTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTg                                            >  1:245304/1‑140 (MQ=255)                                                                                         cTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTg                                            >  2:899407/1‑140 (MQ=255)                                                                                              tCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCaga                                       >  1:919999/1‑140 (MQ=255)                                                                                                 ccATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCagaaga                                    >  1:503674/1‑140 (MQ=255)                                                                                                 ccATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCagaaga                                    >  2:671480/1‑140 (MQ=255)                                                                                                 ccATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCagaaga                                    >  1:188699/1‑140 (MQ=255)                                                                                                      ttCGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTg                               <  2:245304/140‑1 (MQ=255)                                                                                                        cGTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCa                             <  2:536214/140‑1 (MQ=255)                                                                                                         gTCATCATGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCAc                            <  1:989267/140‑1 (MQ=255)                                                                                                           catcatGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCACCa                          <  2:874936/140‑1 (MQ=255)                                                                                                                tGGTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCACCAATCCa                     >  1:1109322/1‑140 (MQ=255)                                                                                                                  gTGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCACCAATCCATa                   >  2:502344/1‑140 (MQ=255)                                                                                                                   tGACGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCACCAATCCATaa                  >  1:77917/1‑140 (MQ=255)                                                                                                                     aCGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCAcc                           <  1:1040264/129‑1 (MQ=255)                                                                                                                     aCGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCAcc                           >  2:1040264/1‑129 (MQ=255)                                                                                                                     aCGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCAc                            >  1:374764/1‑128 (MQ=255)                                                                                                                     aCGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCAc                            <  2:374764/128‑1 (MQ=255)                                                                                                                     aCGCCGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCACCAATCCATAACg                >  2:925575/1‑140 (MQ=255)                                                                                                                         cGTTGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCACCAATCCATAACGGTgg            <  1:502344/140‑1 (MQ=255)                                                                                                                           ttGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCACCAATCCAt                    >  1:271221/1‑130 (MQ=255)                                                                                                                           ttGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCACCAATCCAt                    <  2:271221/130‑1 (MQ=255)                                                                                                                           ttGCCATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCACCAATCCATAACGGTGGCa          >  1:492252/1‑140 (MQ=255)                                                                                                                              ccATCGTCGTGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCACCAATCCATAACGGTGGCAAtt       <  1:1041996/140‑1 (MQ=255)                                                                                                                                   gtcgtGG‑CCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCACCAATCCATAACGGTGGCAATTTACTg  >  1:970333/1‑140 (MQ=255)                                                                                                                                          |                                                                                                                                      GGAAGATGTGCCTGATATTCCATTCGCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGGCCCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCACCAATCCATAACGGTGGCAATTTACTG  >  NC_000913/3000521‑3000791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑