Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,634,086	0	T	C	23.5%	152.6 / 51.5	85	pseudogene (373/1607 nt)	yhiL	putative uncharacterized protein YhiL
Reads supporting (aligned to +/- strand):  ref base T (25/40);  new base C (9/11);  total (34/51)
Fisher's exact test for biased strand distribution p-value = 6.12e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.57e-01
Rejected as consensus: Frequency below/above cutoff threshold.

TTTGAAATTACCACTAAGAAGAGTAAAGAAATTTCTCGCTATGATAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTC  >  NC_000913/3633952‑3634224                                                                                                                                       |                                                                                                                                           tttGAAATTACCACTAAGAAGAGTAAAGAAATTTCTCGCTATGATAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATgg                                                                                                                                       <  2:27449/140‑1 (MQ=255)         tACCACTAAGAAGAGTAAAGAAATTTCTCGCTATGATAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGAt                                                                                                                               <  1:1060252/140‑1 (MQ=255)          aCCACTAAGAAGAGTAAAGAAATTTCTCGCTATGATAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATa                                                                                                                              >  2:493529/1‑140 (MQ=255)          aCCACTAAGAAGAGTAAAGAAATTTCTCGCTATGATAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATa                                                                                                                              >  2:1130519/1‑140 (MQ=255)              cTAAGAAGAGTAAAGAAATTTCTCGCTATGATAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGCAATGGGAGACGATAAttt                                                                                                                          <  2:368671/140‑1 (MQ=255)                 agaagaGTAAAGAAATTTCTCGCTATGATAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTaa                                                                                                                       <  1:270591/140‑1 (MQ=255)                 agaagaGTAAAGAAATTTCTCGCTATGATAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTaa                                                                                                                       <  2:605440/140‑1 (MQ=255)                 agaagaGTAAAGAAATTTCTCGCTATGATAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTaa                                                                                                                       <  1:690976/140‑1 (MQ=255)                    agagTAAAGAAATTTCTCGCTATGATAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAacac                                                                                                                    <  2:771203/140‑1 (MQ=255)                     gagTAAAGAAATTTCTCGCTATGATAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAAcaca                                                                                                                   <  1:821010/140‑1 (MQ=255)                     gagTAAAGAAATTTCTCGCTATGATAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAAcaca                                                                                                                   <  2:485010/140‑1 (MQ=255)                     gagTAAAGAAATTTCTCGCTATGATAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGCAATGGGAGACGATAATTTTAAcaca                                                                                                                   <  1:237704/140‑1 (MQ=255)                           aGAAATTTCTCGCTATGATAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGCAATGGGAGACGATAATTTTAACACATGGTTa                                                                                                             >  1:618503/1‑140 (MQ=255)                                tttCTCGCTATGATAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGCAATGGGAGACGATAATTTTAACACATGGTTATTGTc                                                                                                        <  2:895597/140‑1 (MQ=255)                                tttCTCGCTATGATAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGCAATGGGAGACGATAATTTTAACACATGGTTATTGTc                                                                                                        >  1:27543/1‑140 (MQ=255)                                tttCTCGCTATGATAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGCAATGGGAGACGATAATTTTAACACATGGTTATTGTc                                                                                                        <  2:618503/140‑1 (MQ=255)                                     cGCTATGATAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGta                                                                                                   <  1:950927/140‑1 (MQ=255)                                            aTAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGt                                                                                            <  2:377719/140‑1 (MQ=255)                                                  aGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTc                                                                                                        >  1:961494/1‑122 (MQ=255)                                                  aGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTc                                                                                                        <  2:961494/122‑1 (MQ=255)                                                  aGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGt                                                                                            >  1:519456/1‑134 (MQ=255)                                                  aGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGt                                                                                            <  2:519456/134‑1 (MQ=255)                                                  aGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGCAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGAt                                                                                      >  2:573739/1‑140 (MQ=255)                                                   gCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGCAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATa                                                                                     <  1:573739/140‑1 (MQ=255)                                                    cccATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGta                                                                                                   >  1:829865/1‑125 (MQ=255)                                                    cccATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGta                                                                                                   <  2:829865/125‑1 (MQ=255)                                                    cccATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGt                                                                                            <  1:149658/132‑1 (MQ=255)                                                    cccATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGt                                                                                            >  2:149658/1‑132 (MQ=255)                                                    cccATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTa                                                                                           >  2:1073581/1‑133 (MQ=255)                                                    cccATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTa                                                                                           <  1:1073581/133‑1 (MQ=255)                                                    cccATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATaa                                                                                    >  2:684641/1‑140 (MQ=255)                                                    cccATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATaa                                                                                    >  2:348123/1‑140 (MQ=255)                                                    cccATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATaa                                                                                    >  1:221270/1‑140 (MQ=255)                                                    cccATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATaa                                                                                    >  2:269146/1‑140 (MQ=255)                                                       aTCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACg                                                                                 <  1:757303/140‑1 (MQ=255)                                                       aTCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACg                                                                                 <  1:493529/140‑1 (MQ=255)                                                       aTCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGCAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACg                                                                                 >  1:874788/1‑140 (MQ=255)                                                          aaCTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTAt                                                                              <  1:102013/140‑1 (MQ=255)                                                          aaCTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTAt                                                                              <  2:766820/140‑1 (MQ=255)                                                           aCTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATc                                                                             <  1:655451/140‑1 (MQ=255)                                                                            tGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGa                                                            <  1:287169/140‑1 (MQ=255)                                                                              gattATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAAt                                                          <  2:560112/138‑1 (MQ=255)                                                                              aTTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAAt                                                          >  1:771712/1‑140 (MQ=255)                                                                              aTTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAAt                                                          >  2:1060062/1‑140 (MQ=255)                                                                              aTTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAAt                                                          <  2:771712/140‑1 (MQ=255)                                                                              aTTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAAt                                                          <  2:815606/140‑1 (MQ=255)                                                                               tttATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATc                                                         >  2:235344/1‑140 (MQ=255)                                                                               tttATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATc                                                         <  2:221270/140‑1 (MQ=255)                                                                                    ctcCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCtatta                                                    <  1:308381/140‑1 (MQ=255)                                                                                      ccAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATtata                                                  <  2:966007/140‑1 (MQ=255)                                                                                         gagGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTc                                               >  1:923931/1‑140 (MQ=255)                                                                                            gAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTg                                            <  1:74773/140‑1 (MQ=255)                                                                                            gAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGCAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTg                                            >  1:237996/1‑140 (MQ=255)                                                                                             aaTTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGa                                           <  1:684641/140‑1 (MQ=255)                                                                                             aaTTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGa                                           <  1:1107769/140‑1 (MQ=255)                                                                                             aaTTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGCAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGa                                           <  2:27543/140‑1 (MQ=255)                                                                                             aaTTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGCAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGa                                           <  2:370438/140‑1 (MQ=255)                                                                                               ttAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAat                                         <  1:1060062/140‑1 (MQ=255)                                                                                               ttAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAat                                         <  2:675269/140‑1 (MQ=255)                                                                                               ttAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGCAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAat                                         <  1:890088/140‑1 (MQ=255)                                                                                               ttAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGCAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAat                                         <  2:874788/140‑1 (MQ=255)                                                                                                taataaAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAata                                        <  1:269146/140‑1 (MQ=255)                                                                                                taataaAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAata                                        <  1:348123/140‑1 (MQ=255)                                                                                                 aataaaataaTAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAatat                                       >  1:450273/1‑140 (MQ=255)                                                                                                      aataatAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCtata                                  >  1:1094815/1‑140 (MQ=255)                                                                                                      aataatAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCtata                                  >  2:1078401/1‑140 (MQ=255)                                                                                                             aCCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGtt                           <  1:1130519/140‑1 (MQ=255)                                                                                                             aCCGCCCTTACACTCAACAGTAACGGCAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGtt                           <  2:237996/140‑1 (MQ=255)                                                                                                                gCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCAc                        <  2:450273/140‑1 (MQ=255)                                                                                                                           cAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAAc             <  2:1026717/140‑1 (MQ=255)                                                                                                                            aaCAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACt                       >  2:231733/1‑129 (MQ=255)                                                                                                                            aaCAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACt                       <  1:231733/129‑1 (MQ=255)                                                                                                                            aaCAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAAcc            <  1:318753/140‑1 (MQ=255)                                                                                                                            aaCAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAAcc            >  1:517145/1‑140 (MQ=255)                                                                                                                            aaCAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAAcc            >  1:903296/1‑140 (MQ=255)                                                                                                                            aaCAGTAACGGCAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGt                            >  2:778158/1‑124 (MQ=255)                                                                                                                            aaCAGTAACGGCAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGt                            <  1:778158/124‑1 (MQ=255)                                                                                                                            aaCAGTAACGGCAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAAcc            >  2:580753/1‑140 (MQ=255)                                                                                                                            aaCAGTAACGGCAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAAcc            >  1:7006/1‑140 (MQ=255)                                                                                                                                 tAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACt       >  2:56985/1‑140 (MQ=255)                                                                                                                                 tAACGGCAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACt       >  2:252031/1‑140 (MQ=255)                                                                                                                                   aCGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACttt     >  1:189861/1‑140 (MQ=255)                                                                                                                                   aCGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACttt     <  1:933905/140‑1 (MQ=255)                                                                                                                                   aCGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACttt     >  2:933905/1‑140 (MQ=255)                                                                                                                                      gTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTtctc  >  2:165708/1‑140 (MQ=255)                                                                                                                                       |                                                                                                                                           TTTGAAATTACCACTAAGAAGAGTAAAGAAATTTCTCGCTATGATAGAAAGCCCATCAACTTTATAAATTATATCTGATTTATCTCCAGAGGAATTAATAAAATAATAACCGCCCTTACACTCAACAGTAACGGTAATGGGAGACGATAATTTTAACACATGGTTATTGTCTGGTATAATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTC  >  NC_000913/3633952‑3634224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑