Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	481,357	A→G	V1016A (GTA→GCA)	acrB ←	multidrug efflux pump RND permease AcrB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	481,357	0	A	G	100.0%	350.7 / NA	96	V1016A (GTA→GCA)	acrB	multidrug efflux pump RND permease AcrB
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (49/47);  total (49/47)

GCCGCTTACGCGGCCTTAGTGATTACACGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTACCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAGGTCATCAGGATCGGACG  >  NC_000913/481220‑481487                                                                                                                                          |                                                                                                                                   gCCGCTTACGCGGCCTTAGTGATTACACGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCTCCACAAAAAATACGGGAACGAAGAAGATTGCCAGTccc                                                                                                                                  >  2:288081/1‑140 (MQ=255)     cTTACGCGGCCTTAGTGATTACACGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTg                                                                                                                              <  2:629635/140‑1 (MQ=255)         cgcgGCCTTAGTGATTACACGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGt                                                                                                                          <  2:151647/140‑1 (MQ=255)                  aGTGATTACACGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCa                                                                                                                     >  2:178172/1‑136 (MQ=255)                  aGTGATTACACGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCa                                                                                                                     <  1:178172/136‑1 (MQ=255)                  aGTGATTACACGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATccc                                                                                                                 >  2:495826/1‑140 (MQ=255)                      aTTACACGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCg                                                                                                                >  2:590973/1‑137 (MQ=255)                      aTTACACGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCg                                                                                                                <  1:590973/137‑1 (MQ=255)                        tACACGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGc                                                                                                                             <  2:823537/122‑1 (MQ=255)                        tACACGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGc                                                                                                                             >  1:823537/1‑122 (MQ=255)                        tACACGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCAt                                                                                                           >  2:474195/1‑140 (MQ=255)                        tACACGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCAt                                                                                                           >  2:133924/1‑140 (MQ=255)                        tACACGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATAACGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCAt                                                                                                           >  2:675107/1‑140 (MQ=255)                         acacGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCAt                                                                                                           >  2:1150141/1‑139 (MQ=255)                         acacGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCAt                                                                                                           <  1:1150141/139‑1 (MQ=255)                          cacGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATccc                                                                                                                 >  1:314943/1‑132 (MQ=255)                          cacGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATccc                                                                                                                 <  2:314943/132‑1 (MQ=255)                          cacGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTa                                                                                                         <  2:630675/140‑1 (MQ=255)                          cacGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTa                                                                                                         <  1:495826/140‑1 (MQ=255)                            cGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTaca                                                                                                       <  1:1119334/140‑1 (MQ=255)                            cGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTaca                                                                                                       <  1:90150/140‑1 (MQ=255)                            cGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTaca                                                                                                       <  1:474195/140‑1 (MQ=255)                             gTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTaca                                                                                                       >  1:643129/1‑139 (MQ=255)                             gTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTaca                                                                                                       <  2:643129/139‑1 (MQ=255)                              ttGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAGGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACAcc                                                                                                     >  2:615183/1‑140 (MQ=255)                              ttGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACAcc                                                                                                     <  1:1010691/140‑1 (MQ=255)                               tGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCg                                                                                                    >  2:684197/1‑140 (MQ=255)                                gTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATccc                                                                                                                 <  2:59387/126‑1 (MQ=255)                                gTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATccc                                                                                                                 >  1:59387/1‑126 (MQ=255)                                gTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCCCCCATTACACCgg                                                                                                   >  1:9637/1‑140 (MQ=255)                                 tATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGt                                                                                                  >  1:351068/1‑140 (MQ=255)                                 tATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGt                                                                                                  <  1:963257/140‑1 (MQ=255)                                 tATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGt                                                                                                  >  2:382597/1‑140 (MQ=255)                                     aaTGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCt                                                                                              >  2:248086/1‑140 (MQ=255)                                         atgatCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTg                                                                                          >  1:716107/1‑140 (MQ=255)                                         atgatCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTg                                                                                          >  1:923604/1‑140 (MQ=255)                                         atgatCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGCACCTACTg                                                                                          >  1:309781/1‑140 (MQ=255)                                           gatCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCg                                                                                        >  1:125312/1‑140 (MQ=255)                                             tCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGtt                                                                                      >  1:97773/1‑140 (MQ=255)                                                aCAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTg                                                                                   <  2:1104215/140‑1 (MQ=255)                                                      tGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGcc                                                                             >  1:253925/1‑140 (MQ=255)                                                       ggCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCg                                                                            >  2:405452/1‑140 (MQ=255)                                                       ggCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCg                                                                            <  1:258782/140‑1 (MQ=255)                                                       ggCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCg                                                                            >  1:158229/1‑140 (MQ=255)                                                           gtgCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGATGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAAc                                                                        >  1:1010367/1‑140 (MQ=255)                                                           gtgCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAAc                                                                        >  2:335343/1‑140 (MQ=255)                                                            tgCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGcc                                                                             >  1:893855/1‑134 (MQ=255)                                                            tgCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGcc                                                                             <  2:893855/134‑1 (MQ=255)                                                            tgCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAAcc                                                                       <  1:382597/140‑1 (MQ=255)                                                              cTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAg                                                                     >  2:734886/1‑140 (MQ=255)                                                              cTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAg                                                                     >  1:1038621/1‑140 (MQ=255)                                                              cTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAg                                                                     >  2:568110/1‑140 (MQ=255)                                                              cTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAg                                                                     >  1:197651/1‑140 (MQ=255)                                                                cGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCa                                                                   <  2:923604/140‑1 (MQ=255)                                                                 gATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCAc                                                                  <  1:734886/140‑1 (MQ=255)                                                                 gATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCAc                                                                  <  1:639423/140‑1 (MQ=255)                                                                 gATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCAc                                                                  <  1:568110/140‑1 (MQ=255)                                                                 gATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCAc                                                                  <  2:313956/140‑1 (MQ=255)                                                                 gATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCAc                                                                  <  2:97773/140‑1 (MQ=255)                                                                 gATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATAACGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCAc                                                                  <  1:675107/140‑1 (MQ=255)                                                                  atatCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCAcc                                                                 >  1:384767/1‑140 (MQ=255)                                                                   tatCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCa                                                                >  2:724668/1‑140 (MQ=255)                                                                    atCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCGCCAg                                                               <  2:716107/140‑1 (MQ=255)                                                                    atCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAg                                                               <  2:9637/140‑1 (MQ=255)                                                                    atCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAg                                                               <  2:253925/140‑1 (MQ=255)                                                                    atCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAg                                                               <  2:1038621/140‑1 (MQ=255)                                                                    atCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAg                                                               <  1:684197/140‑1 (MQ=255)                                                                      cTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCg                                                                            <  2:717763/125‑1 (MQ=255)                                                                      cTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCg                                                                            >  1:717763/1‑125 (MQ=255)                                                                             cTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATaa                                                      >  1:287184/1‑140 (MQ=255)                                                                               tGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAAcc                                                    >  1:577219/1‑140 (MQ=255)                                                                                gCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCa                                                   >  2:132422/1‑140 (MQ=255)                                                                                      aaaGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCa                                             >  1:1009718/1‑140 (MQ=255)                                                                                        aGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATa                                           >  1:337678/1‑140 (MQ=255)                                                                                             cggcgAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAg                                                  >  1:966917/1‑128 (MQ=255)                                                                                             cggcgAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAg                                                  <  2:966917/128‑1 (MQ=255)                                                                                             cggcgAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCa                                             >  1:1152738/1‑133 (MQ=255)                                                                                             cggcgAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCa                                             <  2:1152738/133‑1 (MQ=255)                                                                                               gcgAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGa                                    <  2:287184/140‑1 (MQ=255)                                                                                                   accaccACAAAGAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGAt                                <  2:158229/140‑1 (MQ=255)                                                                                                              gAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCg                     <  1:572307/140‑1 (MQ=255)                                                                                                              gAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCg                     <  1:405452/140‑1 (MQ=255)                                                                                                              gAATACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCg                     <  2:197651/140‑1 (MQ=255)                                                                                                               aaTACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGa                    >  1:639590/1‑140 (MQ=255)                                                                                                                aTACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAg                   >  2:986872/1‑140 (MQ=255)                                                                                                                aTACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAg                   <  2:366560/140‑1 (MQ=255)                                                                                                                aTACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAg                   <  2:125312/140‑1 (MQ=255)                                                                                                                aTACCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAg                   <  1:132422/140‑1 (MQ=255)                                                                                                                  aCCGGAACGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAGGt                 >  1:1010354/1‑140 (MQ=255)                                                                                                                         cGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAg                   <  2:816582/131‑1 (MQ=255)                                                                                                                         cGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAg                   >  1:816582/1‑131 (MQ=255)                                                                                                                         cGAAGAAGATTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAGGTCATCAgg          >  1:200657/1‑140 (MQ=255)                                                                                                                             gaagaTTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAGGTCATCAGGATCg      <  1:248086/140‑1 (MQ=255)                                                                                                                              aagaTTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAGGTCATCAGGATCgg     >  2:305621/1‑140 (MQ=255)                                                                                                                              aagaTTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAGGTCATCAGGATCgg     <  2:1010354/140‑1 (MQ=255)                                                                                                                                 aTTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAGGtcat              <  2:1058133/128‑1 (MQ=255)                                                                                                                                 aTTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAGGtcat              >  1:1058133/1‑128 (MQ=255)                                                                                                                                 aTTGCCAGTGCCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAGGTCATCAGGATCGGACg  >  2:1078743/1‑140 (MQ=255)                                                                                                                                          |                                                                                                                                   GCCGCTTACGCGGCCTTAGTGATTACACGTTGTATCAATGATGATCGACAGTATGGCTGTGCTCGATATCTTCATTCTTGCGGCTAAAGCGGCGGCGAACCACCACAAAGAATACCGGAACGAAGAAGATTGCCAGTACCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAGGTCATCAGGATCGGACG  >  NC_000913/481220‑481487

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑