Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,216,120	T→C	V18A (GTG→GCG)	ymgA →	putative two‑component system connector protein YmgA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,216,120	0	T	C	100.0%	272.8 / NA	74	V18A (GTG→GCG)	ymgA	putative two‑component system connector protein YmgA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (40/34);  total (40/34)

CAGAAACATTATAATGCACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGTGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGCATAATTCGTGATTTTAGCAAT  >  NC_000913/1215984‑1216253                                                                                                                                         |                                                                                                                                      cAGAAACATTATAATGCACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCt                                                                                                                                    >  1:605587/1‑140 (MQ=255)   gAAACATTATAATGCACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTcc                                                                                                                                  <  1:324403/140‑1 (MQ=255)      aCATTATAATGCACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGa                                                                                                                               >  1:211588/1‑140 (MQ=255)         ttATAATGCACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATAc                                                                                                                            >  2:788422/1‑140 (MQ=255)               tGCACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCa                                                                                                                      >  1:829694/1‑140 (MQ=255)                 cACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATg                                                                                                                    >  1:914340/1‑140 (MQ=255)                    tAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCa                                                                                                                      >  1:201611/1‑135 (MQ=255)                    tAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCa                                                                                                                      <  2:201611/135‑1 (MQ=255)                    tAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAg                                                                                                                 >  2:285185/1‑140 (MQ=255)                           gTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAAtt                                                                                                          >  2:787272/1‑140 (MQ=255)                              gCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAAttttt                                                                                                       <  2:473670/140‑1 (MQ=255)                                    tGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGTCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGc                                                                                                 <  1:279271/140‑1 (MQ=255)                                     gAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCa                                                                                                <  1:331122/140‑1 (MQ=255)                                       ataatGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGTAGa                                                                                              <  2:1106393/140‑1 (MQ=255)                                         aatGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCa                                                                                                <  1:697002/136‑1 (MQ=255)                                         aatGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCa                                                                                                >  2:697002/1‑136 (MQ=255)                                         aatGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGAct                                                                                            <  1:236936/140‑1 (MQ=255)                                          atGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGActc                                                                                           >  1:254305/1‑140 (MQ=255)                                           tGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGActct                                                                                          >  2:599536/1‑140 (MQ=255)                                           tGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGActct                                                                                          >  2:956520/1‑140 (MQ=255)                                             cAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCtta                                                                                        >  1:263390/1‑140 (MQ=255)                                                cAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCGTTGCAGACTCttatta                                                                                     <  2:842585/140‑1 (MQ=255)                                                cAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCttatta                                                                                     >  1:31755/1‑140 (MQ=255)                                                cAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCttatta                                                                                     >  2:239400/1‑140 (MQ=255)                                                   ccTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGc                                                                                  >  2:311605/1‑140 (MQ=255)                                                   ccTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGc                                                                                  >  2:977400/1‑140 (MQ=255)                                                     tGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCGGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCaa                                                                                >  2:350152/1‑140 (MQ=255)                                                     tGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGAc                                                                                             <  2:1012276/127‑1 (MQ=255)                                                     tGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGAc                                                                                             >  1:1012276/1‑127 (MQ=255)                                                          attTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACt                                                                           <  2:254305/140‑1 (MQ=255)                                                          attTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACt                                                                           <  1:787272/140‑1 (MQ=255)                                                          attTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACt                                                                           <  1:553311/140‑1 (MQ=255)                                                          attTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACt                                                                           <  1:311605/140‑1 (MQ=255)                                                                   gTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGaa                                                                  >  1:951472/1‑140 (MQ=255)                                                                   gTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGaa                                                                  >  1:1039156/1‑140 (MQ=255)                                                                     tAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAAt                                                                <  1:977400/140‑1 (MQ=255)                                                                      aGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATc                                                               >  1:668110/1‑140 (MQ=255)                                                                      aGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATc                                                               >  2:911779/1‑140 (MQ=255)                                                                        cTATGAAGTCGTTATGAAGACATCTGACAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCgg                                                             >  2:42117/1‑140 (MQ=255)                                                                          aTGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCt                                                           <  2:914340/140‑1 (MQ=255)                                                                             aaGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAg                                                        >  1:882837/1‑140 (MQ=255)                                                                                  gTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAAt                                                                <  1:88332/127‑1 (MQ=255)                                                                                  gTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAAt                                                                >  2:88332/1‑127 (MQ=255)                                                                                        aaGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCttt                                             >  2:299398/1‑140 (MQ=255)                                                                                             aTCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCGGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGAc                                        <  1:350152/140‑1 (MQ=255)                                                                                             aTCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGAc                                        >  2:602976/1‑140 (MQ=255)                                                                                             aTCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGAc                                        >  1:138668/1‑140 (MQ=255)                                                                                             aTCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGAc                                        >  2:97957/1‑140 (MQ=255)                                                                                              tCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGAcg                                       <  1:285185/140‑1 (MQ=255)                                                                                                tGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGAcgcg                                     <  2:10766/140‑1 (MQ=255)                                                                                                tGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGAcgcg                                     <  1:97957/140‑1 (MQ=255)                                                                                                tGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGAcgcg                                     <  1:239400/140‑1 (MQ=255)                                                                                                tGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGAcgcg                                     <  1:911779/140‑1 (MQ=255)                                                                                                tGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGAcgcg                                     <  2:668110/140‑1 (MQ=255)                                                                                                     aTGAACGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTa                                <  1:602976/140‑1 (MQ=255)                                                                                                         aCGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTg                            <  1:956520/140‑1 (MQ=255)                                                                                                          cGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGAcgcg                                     <  2:965877/130‑1 (MQ=255)                                                                                                          cGTATAAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGAcgcg                                     >  1:965877/1‑130 (MQ=255)                                                                                                            tataAAATATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACa                         >  2:1112269/1‑140 (MQ=255)                                                                                                            tataAAATATGAAATTACTGGCCAGGCGGCGCT‑‑AGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGc                       >  2:1135072/1‑140 (MQ=255)                                                                                                               aaaaTATGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGCa                      <  2:31755/140‑1 (MQ=255)                                                                                                                   tatGAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGCATAAt                  >  2:722040/1‑140 (MQ=255)                                                                                                                      gAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGCATAATTCg               >  1:1136259/1‑140 (MQ=255)                                                                                                                      gAAATTACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGCATAATTCg               >  1:613327/1‑140 (MQ=255)                                                                                                                          ttACTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGCATAATTCGTGAt           <  2:605587/140‑1 (MQ=255)                                                                                                                             cTGGCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGCATAATTCGTGAtttt        >  1:22966/1‑140 (MQ=255)                                                                                                                               ggCCAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGCATAATTCGTGATTTTAg      >  2:809/1‑140 (MQ=255)                                                                                                                                  cAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGCATAATTCg               <  2:1124061/128‑1 (MQ=255)                                                                                                                                  cAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGCATAATTCg               >  1:1124061/1‑128 (MQ=255)                                                                                                                                  cAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGCATAATTCGTGATTTTAg      >  2:745652/1‑137 (MQ=255)                                                                                                                                  cAGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGCATAATTCGTGATTTTAg      <  1:745652/137‑1 (MQ=255)                                                                                                                                   aGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGCATAATTCGTGATTTTAGCAAt  <  2:951472/140‑1 (MQ=255)                                                                                                                                   aGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGCATAATTCGTGATTTTAGCAAt  <  1:299398/140‑1 (MQ=255)                                                                                                                                   aGGCGGCGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGCATAATTCGTGATTTTAGCAAt  <  1:900462/140‑1 (MQ=255)                                                                                                                                     gcggcgCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGCATAATTCGTGATTTTAg      >  1:490302/1‑134 (MQ=255)                                                                                                                                     gcggcgCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGCATAATTCGTGATTTTAg      <  2:490302/134‑1 (MQ=255)                                                                                                                                         |                                                                                                                                      CAGAAACATTATAATGCACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAACAGGTTAGCTATGAAGTCGTTATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGTGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGCATAATTCGTGATTTTAGCAAT  >  NC_000913/1215984‑1216253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑