Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,287,208	T→C	pseudogene (1707/2525 nt)	yejO ←	adhesin‑like autotransporter YejO

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,287,208	0	T	C	100.0%	246.4 / NA	69	pseudogene (1707/2525 nt)	yejO	adhesin‑like autotransporter YejO
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (36/33);  total (36/33)

AACGGCTATCGATACCGAGCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCTACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCAGACTCCAGCTATGGTTGCCATTA  >  NC_000913/2287076‑2287344                                                                                                                                     |                                                                                                                                         aaCGGCTATCGATACCGAGCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGa                                                                                                                                   <  1:195932/140‑1 (MQ=255)   cGGCTATCGATACCGAGCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACg                                                                                                                                 <  1:904412/140‑1 (MQ=255)   cGGCTATCGATACCGAGCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACg                                                                                                                                 <  2:466786/140‑1 (MQ=255)       tATCGATACCGAGCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTTCGCCACCAAGACGCTca                                                                                                                             >  2:1013935/1‑140 (MQ=255)       tATCGATACCGAGCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTca                                                                                                                             >  2:898761/1‑140 (MQ=255)        aTCGATACCGAGCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTcac                                                                                                                            <  1:180651/140‑1 (MQ=255)           gATACCGAGCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTcacgca                                                                                                                         <  2:954602/140‑1 (MQ=255)           gATACCGAGCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTcacgca                                                                                                                         <  2:101515/140‑1 (MQ=255)             tACCGAGCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTcacgcacg                                                                                                                       <  2:1089708/140‑1 (MQ=255)             tACCGAGCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTcacgcacg                                                                                                                       <  1:328337/140‑1 (MQ=255)             tACCGAGCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCATATCGTAACTAACGCCTTTTACGCCACCAAGACGCTcacgcacg                                                                                                                       <  2:345139/140‑1 (MQ=255)               ccGAGCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGgt                                                                                                                     >  1:235105/1‑140 (MQ=255)                  aGCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGa                                                                                                                                   >  2:46027/1‑123 (MQ=255)                  aGCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGa                                                                                                                                   <  1:46027/123‑1 (MQ=255)                  aGCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTcacgc                                                                                                                          <  1:725603/132‑1 (MQ=255)                  aGCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTcacgc                                                                                                                          >  2:725603/1‑132 (MQ=255)                   gCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTcc                                                                                                                 >  1:1091144/1‑140 (MQ=255)                   gCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTcc                                                                                                                 >  2:235692/1‑140 (MQ=255)                    cGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCa                                                                                                                >  1:672104/1‑140 (MQ=255)                       cAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTcacgca                                                                                                                         <  2:51776/128‑1 (MQ=255)                       cAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTcacgca                                                                                                                         >  1:51776/1‑128 (MQ=255)                       cAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGtt                                                                                                             >  1:413948/1‑140 (MQ=255)                        aGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTc                                                                                                            <  1:1116441/140‑1 (MQ=255)                            ccGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCa                                                                                                        <  2:179494/140‑1 (MQ=255)                            ccGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCa                                                                                                        <  2:43297/140‑1 (MQ=255)                               tCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCa                                                                                                     >  2:1107692/1‑140 (MQ=255)                                        gCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCGACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGc                                                                                            >  1:382837/1‑140 (MQ=255)                                                  aGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCGACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCgg                                                                                  <  2:382837/140‑1 (MQ=255)                                                  aGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCgg                                                                                  <  2:672104/140‑1 (MQ=255)                                                  aGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCgg                                                                                  <  2:413948/140‑1 (MQ=255)                                                     tCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGgccg                                                                               <  1:937143/140‑1 (MQ=255)                                                     ccccGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGgccg                                                                               <  2:235105/139‑1 (MQ=255)                                                       ccGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGgccgcc                                                                             <  1:898761/140‑1 (MQ=255)                                                       ccGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGgccgcc                                                                             <  2:790033/140‑1 (MQ=255)                                                        cGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCa                                                                            >  1:1041665/1‑140 (MQ=255)                                                        cGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCa                                                                            >  1:950542/1‑140 (MQ=255)                                                        cGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCa                                                                            <  1:931979/140‑1 (MQ=255)                                                               gTGGTCGCGTTGTTGCGGGTGTTAATTGCCGAACTCCCCATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAg                                                                     <  2:808697/140‑1 (MQ=255)                                                                          gttgCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTgg                                                          >  1:141933/1‑140 (MQ=255)                                                                          gttgCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTgg                                                          >  1:486635/1‑140 (MQ=255)                                                                           ttgCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGt                                                         <  1:234525/140‑1 (MQ=255)                                                                            tgCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGtt                                                        >  2:437550/1‑140 (MQ=255)                                                                             gCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTg                                                       >  1:25797/1‑140 (MQ=255)                                                                             gCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCCTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTg                                                       >  2:500895/1‑140 (MQ=255)                                                                               gggTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTTCGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGaa                                                     <  1:1013935/140‑1 (MQ=255)                                                                                    ttAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGt                                                >  1:271061/1‑140 (MQ=255)                                                                                           ccGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTgc                                         >  2:110992/1‑140 (MQ=255)                                                                                           ccGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTgc                                         >  1:175302/1‑140 (MQ=255)                                                                                                        cGCCGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTg                            >  2:88003/1‑140 (MQ=255)                                                                                                          ccGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGc                           >  1:1080311/1‑139 (MQ=255)                                                                                                          ccGTATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGc                           <  2:1080311/139‑1 (MQ=255)                                                                                                             tATCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCAGa                       <  1:437550/140‑1 (MQ=255)                                                                                                              aTCGTAACTAACGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCAGAc                      <  2:1041665/140‑1 (MQ=255)                                                                                                                  taactaacGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCAGACTCCa                  >  1:881070/1‑140 (MQ=255)                                                                                                                  taactaacGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCAGACTCCa                  >  2:363991/1‑140 (MQ=255)                                                                                                                    actaacGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCAGACTCCAGc                >  2:967146/1‑140 (MQ=255)                                                                                                                     ctaacCCCTTTTACCCCACAAAGACGCTCACCCACGGTGTCCAGTTCTGCATCAAATGCCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCAGACTCCAGCt               <  2:1091144/140‑1 (MQ=255)                                                                                                                        acGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCa                         >  2:639837/1‑127 (MQ=255)                                                                                                                        acGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCa                         <  1:639837/127‑1 (MQ=255)                                                                                                                        acGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCAGACTCCAGCTATg            >  1:260711/1‑140 (MQ=255)                                                                                                                         cGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCAGACTCCAGCTATgg           >  1:27128/1‑140 (MQ=255)                                                                                                                         cGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCAGACTCCAGCTATgg           >  1:303861/1‑140 (MQ=255)                                                                                                                         cGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCAGACTCCAGCTATgg           >  2:583281/1‑140 (MQ=255)                                                                                                                         cGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCAGACTCCAGCTATgg           >  2:707580/1‑140 (MQ=255)                                                                                                                         cGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCAGACTCCAGCTATgg           >  1:1074691/1‑140 (MQ=255)                                                                                                                         cGCCTTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCAGACTCCAGCTATgg           >  1:1056280/1‑140 (MQ=255)                                                                                                                          gCCCTTTACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCAGACTCCAGCTATGGt          <  1:500895/140‑1 (MQ=255)                                                                                                                               ttACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCAGACTCCAGCTATGGTTGCCa     <  1:916080/140‑1 (MQ=255)                                                                                                                               ttACGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCAGACTCCAGCTATGGTTGCCa     >  1:992280/1‑140 (MQ=255)                                                                                                                                  cGCCACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCAGACTCCAGCTATGGTTGCCATTa  <  2:25797/140‑1 (MQ=255)                                                                                                                                     |                                                                                                                                         AACGGCTATCGATACCGAGCGTCAGGCCCGTCAATGTTTGCTCAAAACCAGCTCCCGCATCAGTGGTCACGTTGTTGCGGGTGTTAATTGCCGAACTCCACATCGCCGTATCGTAACTAACGCCTTTTACGCTACCAAGACGCTCACGCACGGTGTCCAGTTCTGCATCAAATACCAGCGGTTGTGCGGCCGCCATATTCAGCACATCAGTGGTTGAAGGGGTAATTTGCGCGCGATTCTCTGCCAGACTCCAGCTATGGTTGCCATTA  >  NC_000913/2287076‑2287344

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑