| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,540,372 | (GC)5→4 | coding (442‑443/1098 nt) | cysA ← | sulfate/thiosulfate ABC transporter ATP binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,540,364 | 0 | G | . | 100.0% | 107.6 / NA | 26 | coding (451/1098 nt) | cysA | sulfate/thiosulfate ABC transporter ATP binding subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (14/12); total (14/12) | |||||||||||
| * | NC_000913 | 2,540,365 | 0 | C | . | 100.0% | 107.6 / NA | 26 | coding (450/1098 nt) | cysA | sulfate/thiosulfate ABC transporter ATP binding subunit |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (14/12); total (14/12) | |||||||||||
GATCGTGGGTCACAAAAACGCTGGTGAATTTTAGTTCTTCATGGAGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCAGCGCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGATGGGCAAGCTGGACCATTTCCAGCAATTTTGTCACTTTCGCTTTGATGGCTG > NC_000913/2540226‑2540483 || gATCGTGGGTCACAAAAACGCTGGTGAATTTTAGTTCTTCATGGAGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCAcagccagc > 1:353090/1‑140 (MQ=255) aTCGTGGGTCACAAAAACGCTGGTGAATTTTAGTTCTTCATGGAGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCAgcg < 2:708110/140‑1 (MQ=255) tCGTGGGTCACAAAAACGCTGGTGAATTTTAGTTCTTCATGGAGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCAgcgc > 2:391507/1‑140 (MQ=255) tGGGTCACAAAAACGCTGGTGAATTTTAGTTCTTCATGGAGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCAgcgcgcg > 1:1049847/1‑140 (MQ=255) tGGGTCACAAAAACGCTGGTGAATTTTAGTTCTTCATGGAGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCAgcgcgcg > 2:1061867/1‑140 (MQ=255) gggTCACAAAAACGCTGGTGAATTTTAGTTCTTCATGGAGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCAgcgcgcg < 1:198029/139‑1 (MQ=255) gggTCACAAAAACGCTGGTGAATTTTAGTTCTTCATGGAGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCAgcgcgcg > 2:198029/1‑139 (MQ=255) ggTCACAAAAACGCTGGTGAATTTTAGTTCTTCATGGAGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCAgcgcgcgcc > 1:845737/1‑139 (MQ=255) gTCACAAAAACGCTGGTGAATTTTAGTTCTTCATGGAGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCAgcgcgcgcca > 1:240277/1‑138 (MQ=255) tCACAAAAACGCTGGTGAATTTTAGTTCTTCATGGAGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCAgcgcgcgccag > 1:1018491/1‑137 (MQ=255) cacaAAAACGCTGGTGAATTTTAGTTCTTCATGGAGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCAgcgcgcgccagc < 2:353090/140‑5 (MQ=255) tcaAAAACGCTGGTGAATTTTAGTTCTTCATGGAGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCAgcgcgcgccagcg > 2:787107/2‑135 (MQ=255) cGCTGGTGAATTTTAGTTCTTCATGGAGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCAcgcg < 1:1061867/140‑1 (MQ=255) cGCTGGTGAATTTTAGTTCTTCATGGAGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCAcgcg > 1:48390/1‑140 (MQ=255) cGCTGGTGAATTTTAGTTCTTCATGGAGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCAcgcg < 2:48390/140‑1 (MQ=255) ggTGAATTTTAGTTCTTCATGGAGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGt < 2:893774/140‑1 (MQ=255) gAGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTgc < 1:741633/140‑1 (MQ=255) aGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTgcg < 1:787107/140‑1 (MQ=255) cGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGAt > 2:415846/1‑140 (MQ=255) gCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATa > 2:3177/1‑140 (MQ=255) cAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGa > 2:717058/1‑140 (MQ=255) aCCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGATGGGCAAGCTGGa > 2:269278/1‑140 (MQ=255) cTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGATggg < 1:651114/129‑1 (MQ=255) cTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGATggg > 2:651114/1‑129 (MQ=255) cTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGATGGGCAAGCTGGAcc > 2:801234/1‑140 (MQ=255) tGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGATGGGCAAGCTGGACCa > 2:414951/1‑140 (MQ=255) tGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGATGGGCAAGCTGGACCa > 2:647180/1‑140 (MQ=255) cgcATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGATggg < 2:347060/126‑1 (MQ=255) cgcATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGATggg > 1:347060/1‑126 (MQ=255) tCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGATGGGCAAGCTGGACCATTTCCa < 2:240277/140‑1 (MQ=255) aGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGATGGGCAAGCTGGACCATTTCCAGCa > 1:816910/1‑140 (MQ=255) cgcgcCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCATGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGATGGGCAAGCTGGACCATTTCCAGCAAt > 2:608475/1‑140 (MQ=255) cgcgcCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGATGGGCAAGCTGGACCATTTCCAGCAAt > 2:305188/1‑140 (MQ=255) ccAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGATGGGCAAGCTGGACCATTTCCAGCAATTTTg < 1:1121855/140‑1 (MQ=255) cAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGATGGGCAAGCTGGACCATTTCCAGCAATTTTGt < 1:717058/140‑1 (MQ=255) gcagcaGAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGATGGGCAAGCTGGACCATTTCCAGCAATTTTGTCACTTTCGCTTTGAt < 2:816910/140‑1 (MQ=255) agcagAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGATGGGCAAGCTGGACCATTTCCAGCAATTTTGTCACTTTCGCTTTGATgg > 1:518127/1‑140 (MQ=255) agAATTTGCGGTTCCACAGCCA‑‑GCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGATGGGCAAGCTGGACCATTTCCAGCAATTTTGTCACTTTCGCTTTGATGGCTg < 1:125319/140‑1 (MQ=255) || GATCGTGGGTCACAAAAACGCTGGTGAATTTTAGTTCTTCATGGAGTTGACGCAGCCAGCGACGCAGCTCTTTACGCACCTGCGCATCCAGCGCGCCAAACGGTTCATCAAGCAGCAGAATTTGCGGTTCCACAGCCAGCGCGCGCGCCAGCGCCACGCGCTGTTTCTGGCCGCCGGAAAGCTGCGCCGGATAACGATCCGCCAGATGGGCAAGCTGGACCATTTCCAGCAATTTTGTCACTTTCGCTTTGATGGCTG > NC_000913/2540226‑2540483 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |