Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,376,571 T→C E69G (GAG→GGG)  sspB ← ClpXP protease specificity‑enhancing factor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,376,5710TC100.0% 313.2 / NA 87E69G (GAG→GGG) sspBClpXP protease specificity‑enhancing factor
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (52/35);  total (52/35)

GTATCTTCATCGTAGGCAGCTTCAGGCTCAAACATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTT  >  NC_000913/3376436‑3376707
                                                                                                                                       |                                                                                                                                        
gTATCTTCATCGTAGGCAGCTTCAGGCTCAAACATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCccatc                                                                                                                                      >  1:637864/1‑140 (MQ=255)
gTATCTTCATCGTAGGCAGCTTCAGGCTCAAACATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCccatc                                                                                                                                      >  1:691246/1‑140 (MQ=255)
gTATCTTCATCGTAGGCAGCTTCAGGCTCAAACATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCccatc                                                                                                                                      >  1:1001929/1‑140 (MQ=255)
   tCTTCATCGTAGGCAGCTTCAGGCTCAAACATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCAtt                                                                                                                                   >  2:159343/1‑140 (MQ=255)
     ttCATCGTAGGCAGCTTCAGGCTCAAACATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCg                                                                                                                                 >  1:348206/1‑140 (MQ=255)
     ttCATCGTAGGCAGCTTCAGGCTCAAACATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCg                                                                                                                                 >  2:436909/1‑140 (MQ=255)
       cATCGTAGGCAGCTTCAGGCTCAAACATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGcc                                                                                                                               >  1:664762/1‑140 (MQ=255)
        aTCGTAGGCAGCTTCAGGCTCAAACATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCa                                                                                                                              >  2:191801/1‑140 (MQ=255)
        aTCGTAGGCAGCTTCAGGCTCAAACATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCa                                                                                                                              >  2:22413/1‑140 (MQ=255)
             aGGCAGCTTCAGGCTCAAACATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTcc                                                                                                                         >  1:1062345/1‑140 (MQ=255)
               gCAGCTTCAGGCTCAAACATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAg                                                                                                                       >  2:825739/1‑140 (MQ=255)
                   cTTCAGGCTCAAACATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTg                                                                                                                   >  2:1019318/1‑140 (MQ=255)
                   cTTCAGGCTCAAACATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTg                                                                                                                   >  2:13070/1‑140 (MQ=255)
                   cTTCAGGCTCAAACATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTg                                                                                                                   >  1:339839/1‑140 (MQ=255)
                        ggCTCAAACATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCACCAGTTCCAGATTGCCGAc                                                                                                              >  1:1053710/1‑140 (MQ=255)
                            cAAACATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCa                                                                                                          <  2:611125/140‑1 (MQ=255)
                             aaaCATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCAc                                                                                                         >  2:983602/1‑140 (MQ=255)
                             aaaCATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCAc                                                                                                         >  2:1107118/1‑140 (MQ=255)
                             aaaCATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCAc                                                                                                         >  2:182167/1‑140 (MQ=255)
                             aaaCATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCAc                                                                                                         >  2:947133/1‑140 (MQ=255)
                              aaCATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCAcg                                                                                                        >  1:414830/1‑140 (MQ=255)
                              aaCATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCAcg                                                                                                        <  1:655549/140‑1 (MQ=255)
                                cATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCAcgcg                                                                                                      <  2:1062345/140‑1 (MQ=255)
                                   cGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACgcggcg                                                                                                   <  2:664762/140‑1 (MQ=255)
                                   cGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACgcggcg                                                                                                   >  2:33255/1‑140 (MQ=255)
                                   cGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACgcggcg                                                                                                   <  1:947133/140‑1 (MQ=255)
                                   cGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACgcggcg                                                                                                   >  1:5011/1‑140 (MQ=255)
                                   cGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACgcggcg                                                                                                   >  1:307114/1‑140 (MQ=255)
                                    gTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGgcgc                                                                                                  >  2:341957/1‑140 (MQ=255)
                                     tGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCa                                                                                                 <  1:825739/140‑1 (MQ=255)
                                       ccTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAAt                                                                                               >  1:531455/1‑140 (MQ=255)
                                       ccTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAAt                                                                                               >  1:414039/1‑140 (MQ=255)
                                        cTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATg                                                                                              <  2:414830/140‑1 (MQ=255)
                                         tGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGt                                                                                             >  2:973201/1‑140 (MQ=255)
                                           cgcCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTg                                                                                           >  2:525142/1‑140 (MQ=255)
                                                         gCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGccc                                                                             <  1:182167/140‑1 (MQ=255)
                                                            tAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTc                                                                          >  2:914822/1‑140 (MQ=255)
                                                            tAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTc                                                                          >  1:71058/1‑140 (MQ=255)
                                                            tAGATAGCCAGCACGGCAG‑CAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCa                                                                         >  1:382041/1‑140 (MQ=255)
                                                             aGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCa                                                                         <  2:339839/140‑1 (MQ=255)
                                                             aGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCa                                                                         <  2:1055464/140‑1 (MQ=255)
                                                               aTAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCAcg                                                                       <  2:71058/140‑1 (MQ=255)
                                                                tAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCAcgc                                                                      <  1:1107118/140‑1 (MQ=255)
                                                                 aGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCAcgcg                                                                     <  1:159343/140‑1 (MQ=255)
                                                                  gCCAGCACGGCGGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAGAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGACTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCACCTCACgcgc                                                                    <  2:753137/140‑1 (MQ=255)
                                                                   ccgtgctggCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCa                                                                   >  1:929607/8‑140 (MQ=255)
                                                                   ccAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGccc                                                                             <  1:942932/130‑1 (MQ=255)
                                                                   ccAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGccc                                                                             >  2:942932/1‑130 (MQ=255)
                                                                   ccAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCa                                                                   <  2:1001929/140‑1 (MQ=255)
                                                                   ccAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCa                                                                   <  1:537486/140‑1 (MQ=255)
                                                                   ccAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCa                                                                   >  1:289986/1‑140 (MQ=255)
                                                                   ccAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCa                                                                   <  1:1019318/140‑1 (MQ=255)
                                                                   ccAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCa                                                                   >  2:177449/1‑140 (MQ=255)
                                                                   ccAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCACCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCa                                                                   <  2:1053710/140‑1 (MQ=255)
                                                                       cACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGt                                                                           <  2:1011455/128‑1 (MQ=255)
                                                                       cACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGt                                                                           >  1:1011455/1‑128 (MQ=255)
                                                                       cACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATAtt                                                               >  2:509455/1‑140 (MQ=255)
                                                                       cACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATAtt                                                               >  2:409587/1‑140 (MQ=255)
                                                                       cACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATAtt                                                               >  1:684396/1‑140 (MQ=255)
                                                                       cACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATAtt                                                               >  2:311467/1‑140 (MQ=255)
                                                                       cACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATAtt                                                               >  1:1104448/1‑140 (MQ=255)
                                                                        aCGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTc                                                              >  2:316386/1‑140 (MQ=255)
                                                                         cGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATAtt                                                               <  1:422325/138‑1 (MQ=255)
                                                                         cGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATAtt                                                               >  2:422325/1‑138 (MQ=255)
                                                                            cagccagcGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATa                                                          >  2:666016/1‑140 (MQ=255)
                                                                                 agcGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCata                                                                 <  1:918124/128‑1 (MQ=255)
                                                                                 agcGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCata                                                                 >  2:918124/1‑128 (MQ=255)
                                                                                   cGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCt                                                   <  2:382041/140‑1 (MQ=255)
                                                                                    ggCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTg                                                  <  2:684396/140‑1 (MQ=255)
                                                                                    ggCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTg                                                  <  1:22413/140‑1 (MQ=255)
                                                                                    ggCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTg                                                  <  1:191801/140‑1 (MQ=255)
                                                                                             aCCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAgg                                         >  2:271532/1‑140 (MQ=255)
                                                                                             aCCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAgg                                         <  1:436909/140‑1 (MQ=255)
                                                                                               cTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGa                                       >  1:165618/1‑140 (MQ=255)
                                                                                                    gcgGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTc                                  <  1:271532/140‑1 (MQ=255)
                                                                                                     cgGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTca                                 <  2:414039/140‑1 (MQ=255)
                                                                                                     cgGAATGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGCCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTca                                 <  2:531455/140‑1 (MQ=255)
                                                                                                         aTGCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATc                             <  1:509455/140‑1 (MQ=255)
                                                                                                           gCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATcca                           <  1:666016/140‑1 (MQ=255)
                                                                                                           gCCACCAAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATcca                           <  1:796413/140‑1 (MQ=255)
                                                                                                            ccaccaAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATc                             >  1:649296/1‑137 (MQ=255)
                                                                                                            ccaccaAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATc                             <  2:649296/137‑1 (MQ=255)
                                                                                                             caccaAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATccacc                         <  2:5011/140‑1 (MQ=255)
                                                                                                             caccaAAGCGCGCGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATccacc                         >  2:138798/1‑140 (MQ=255)
                                                                                                                    gcgcgcGTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGt                  <  2:165618/140‑1 (MQ=255)
                                                                                                                       cgcgTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTgcg               >  1:31470/1‑140 (MQ=255)
                                                                                                                       cgcgTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTgcg               >  2:32648/1‑140 (MQ=255)
                                                                                                                       cgcgTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTgcg               >  1:973241/1‑140 (MQ=255)
                                                                                                                       cgcgTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTgcg               >  1:1133342/1‑140 (MQ=255)
                                                                                                                         cgTTAAAGCGCACCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTgcggc             >  1:1156895/1‑140 (MQ=255)
                                                                                                                                    aCCCCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGtt  >  2:1110748/1‑140 (MQ=255)
                                                                                                                                       |                                                                                                                                        
GTATCTTCATCGTAGGCAGCTTCAGGCTCAAACATCGTGCCTGCGCCATTTTCACGGGCGTAGATAGCCAGCACGGCAGCCAGCGGCACAGAAACCTGACGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTT  >  NC_000913/3376436‑3376707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑