| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,840,141 | A→G | intergenic (‑148/‑74) | nlpA ← / → yicS | lipoprotein‑28/uncharacterized protein YicS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,840,141 | 0 | A | G | 99.0% | 352.9 / ‑5.4 | 99 | intergenic (‑148/‑74) | nlpA/yicS | lipoprotein‑28/uncharacterized protein YicS |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (54/44); total (55/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TACCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACG > NC_000913/3840017‑3840275 | tACCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGc > 2:1162461/1‑140 (MQ=255) aCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCg > 1:1037549/1‑140 (MQ=255) aCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCg > 1:508604/1‑140 (MQ=255) ccTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGa > 2:431185/1‑140 (MQ=255) aCTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGaa > 2:86647/1‑140 (MQ=255) cTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGaaa > 2:983873/1‑140 (MQ=255) tataGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAg > 2:881022/1‑140 (MQ=255) taGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGaaa > 2:147953/1‑137 (MQ=255) taGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGaaa < 1:147953/137‑1 (MQ=255) aGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCaa > 1:1160954/1‑140 (MQ=255) gCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCaaa > 2:148321/1‑140 (MQ=255) cGGTAAGGTCGCTTCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAAc > 2:659245/1‑140 (MQ=255) cGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAGAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAAc > 2:1124304/1‑140 (MQ=255) cGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAAc > 1:491811/1‑140 (MQ=255) gTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTa < 1:955360/140‑1 (MQ=255) tAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAg < 2:306007/132‑1 (MQ=255) tAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAg > 1:306007/1‑132 (MQ=255) tAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCaaa > 1:478311/1‑136 (MQ=255) tAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCaaa < 2:478311/136‑1 (MQ=255) tAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCaa > 1:24285/1‑135 (MQ=255) tAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCaa < 2:24285/135‑1 (MQ=255) tAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTac > 1:740565/1‑140 (MQ=255) tAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTac > 2:628097/1‑140 (MQ=255) tAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTac > 1:805767/1‑140 (MQ=255) tAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTac > 1:1126469/1‑140 (MQ=255) aGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTacac > 2:324074/1‑140 (MQ=255) aGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTacac > 2:246644/1‑140 (MQ=255) aGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTacac > 1:974879/1‑140 (MQ=255) gTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACtt < 1:628097/140‑1 (MQ=255) cGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTAt < 1:881022/140‑1 (MQ=255) gCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCaaa < 2:1169087/129‑1 (MQ=255) gCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCaaa > 1:1169087/1‑129 (MQ=255) gCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACt < 2:727752/136‑1 (MQ=255) gCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACt > 1:727752/1‑136 (MQ=255) gCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATg > 2:170476/1‑140 (MQ=255) gCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATg < 2:491811/140‑1 (MQ=255) cTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCAATGAAAGCAAACTACACTTATGc > 1:1159098/1‑140 (MQ=255) tGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCt < 1:1162461/140‑1 (MQ=255) tttAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCAtt > 1:272110/1‑140 (MQ=255) tttAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCAtt < 1:86647/140‑1 (MQ=255) aaaaCGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATa < 2:1087636/140‑1 (MQ=255) cgaaacgCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATAcaca > 1:586872/1‑140 (MQ=255) gaaacgCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACAt < 1:983873/140‑1 (MQ=255) cTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTaa < 1:69978/140‑1 (MQ=255) tCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAg > 1:176253/1‑140 (MQ=255) cGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAgg < 2:1160954/140‑1 (MQ=255) aaGAATAAAAAGGAATAAAAGTGGAATATAGAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGa < 1:1124304/140‑1 (MQ=255) aaGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGa < 1:659245/140‑1 (MQ=255) aaTAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATc > 2:647615/1‑140 (MQ=255) aaaaaGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCCATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCAt < 2:808348/140‑1 (MQ=255) aaGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGaa < 2:974879/140‑1 (MQ=255) aaGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGaa < 1:324074/140‑1 (MQ=255) gAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAAcc < 2:958447/140‑1 (MQ=255) gAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCAATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAAcc < 2:1159098/140‑1 (MQ=255) gAATAAAAGTGGAATATAAAGTCTGGCACTTCATACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAAcc < 2:958448/140‑1 (MQ=255) aaTAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAAcc > 1:725919/1‑139 (MQ=255) aaTAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAAcc < 2:725919/139‑1 (MQ=255) aaTAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCa > 2:943631/1‑140 (MQ=255) aaaGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGa < 2:814628/140‑1 (MQ=255) aaGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGac > 1:1002646/1‑140 (MQ=255) aGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGaca < 1:453534/140‑1 (MQ=255) aGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGaca < 1:647615/140‑1 (MQ=255) gTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGacac < 2:1126469/140‑1 (MQ=255) gAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACactac > 2:730044/1‑140 (MQ=255) taAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAAcc < 2:1154478/124‑1 (MQ=255) taAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAAcc > 1:1154478/1‑124 (MQ=255) aaaGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTa > 2:1144659/1‑140 (MQ=255) aaGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTAt > 2:359626/1‑140 (MQ=255) ggCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCAc > 2:340178/1‑140 (MQ=255) ggCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCAc > 2:528054/1‑140 (MQ=255) ggCACTTCTTACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCAc > 2:1129048/1‑140 (MQ=255) cttACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAGGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTc > 1:1086788/1‑140 (MQ=255) cttACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTc > 2:296281/1‑140 (MQ=255) ttACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCg < 1:431185/140‑1 (MQ=255) ttACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCg < 1:943631/140‑1 (MQ=255) ttACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCg < 1:1144659/140‑1 (MQ=255) ttACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCg < 2:176253/140‑1 (MQ=255) tACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACtttt > 2:504324/1‑135 (MQ=255) tACTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACtttt < 1:504324/135‑1 (MQ=255) aCTGACCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCt < 1:1129048/140‑1 (MQ=255) aCCACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGc > 1:198803/1‑140 (MQ=255) ccACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGcc > 2:442219/1‑140 (MQ=255) ccACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGcc > 2:266885/1‑140 (MQ=255) ccACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGcc < 1:296281/140‑1 (MQ=255) ccACGCAAGCACGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGcc < 2:130533/140‑1 (MQ=255) cACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCa > 1:1158187/1‑140 (MQ=255) cACGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCa > 2:775410/1‑140 (MQ=255) aCGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAg > 1:189073/1‑140 (MQ=255) aCGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAg < 2:740565/140‑1 (MQ=255) cGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCt < 2:83711/132‑1 (MQ=255) cGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCt > 1:83711/1‑132 (MQ=255) cGCAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAgg > 1:1144857/1‑140 (MQ=255) cAAGCGCGTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCa < 2:805767/140‑1 (MQ=255) cgcgTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGc > 1:243876/1‑135 (MQ=255) cgcgTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGc < 2:243876/135‑1 (MQ=255) cgcgTTTCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGt > 1:88503/1‑140 (MQ=255) tttCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATAc < 2:586872/140‑1 (MQ=255) ttCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGcc > 1:665315/1‑126 (MQ=255) ttCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGcc < 2:665315/126‑1 (MQ=255) ttCGTGCAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACg > 2:64537/1‑140 (MQ=255) | TACCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACG > NC_000913/3840017‑3840275 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |