| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,519,446 | T→C | E293E (GAA→GAG) | yjhU ← | KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator YjhU |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,519,446 | 0 | T | C | 97.1% | 356.2 / ‑0.7 | 105 | E293E (GAA→GAG) | yjhU | KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator YjhU |
| Reads supporting (aligned to +/- strand): ref base T (2/1); new base C (51/51); total (53/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 107 total aligned reads displayed.
ATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGCGACCACAAATGACACCTACT > NC_000913/4519309‑4519581 | atatCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGtctctctc > 2:162034/1‑140 (MQ=255) tatCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTcc > 1:256785/1‑140 (MQ=255) tCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTcccc > 1:1152750/1‑140 (MQ=255) aTGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAg < 2:1156947/140‑1 (MQ=255) ggggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCa > 2:77476/1‑140 (MQ=255) gggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCccacca > 2:293084/1‑136 (MQ=255) gggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCccacca < 1:293084/136‑1 (MQ=255) gggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCaa > 1:785405/1‑140 (MQ=255) gggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCaa > 1:788625/1‑140 (MQ=255) gggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCaa > 1:183013/1‑140 (MQ=255) ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACGCGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAg > 2:190391/1‑140 (MQ=255) ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAg > 1:282876/1‑140 (MQ=255) ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAg > 2:780010/1‑140 (MQ=255) ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAg > 1:635196/1‑140 (MQ=255) ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAg > 1:414866/1‑140 (MQ=255) ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAg > 1:493526/1‑140 (MQ=255) ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAg > 2:642575/1‑140 (MQ=255) ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAg > 1:929650/1‑140 (MQ=255) ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAg > 1:1136403/1‑140 (MQ=255) ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAg > 2:541256/1‑140 (MQ=255) ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAg > 2:798126/1‑140 (MQ=255) ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAg > 1:1057543/1‑140 (MQ=255) ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAg > 2:222814/1‑140 (MQ=255) ggCAGTTGTTCATTCTTTTAGTGTGATAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAg > 2:810966/1‑140 (MQ=255) ttttAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTc > 1:36101/1‑140 (MQ=255) ttAGTGTGGTAATTCACGCGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCaa < 1:190391/140‑1 (MQ=255) ttAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCaa < 2:282876/140‑1 (MQ=255) ttAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCaa < 1:798126/140‑1 (MQ=255) ttAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCaa > 2:658426/1‑140 (MQ=255) ttAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCaa > 2:5346/1‑140 (MQ=255) tAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAAt > 2:111303/1‑140 (MQ=255) tAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAAt > 2:187829/1‑140 (MQ=255) aGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATc < 2:414866/140‑1 (MQ=255) aGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATc < 1:1070031/140‑1 (MQ=255) tgtgGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTg > 2:392188/1‑140 (MQ=255) tgGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGcc > 2:1011980/1‑140 (MQ=255) tgGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGcc > 1:188404/1‑140 (MQ=255) gTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAAt < 2:1040668/133‑1 (MQ=255) gTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAAt > 1:1040668/1‑133 (MQ=255) gTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCtt > 1:18964/1‑140 (MQ=255) aaTTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAg < 2:1057543/140‑1 (MQ=255) aTTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGc < 2:1136403/140‑1 (MQ=255) ttCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGt < 1:319742/124‑1 (MQ=255) ttCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGt > 2:319742/1‑124 (MQ=255) ttCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCt < 1:1109679/140‑1 (MQ=255) cacaCGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGa > 2:576241/1‑140 (MQ=255) cacGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGc > 1:137483/1‑140 (MQ=255) acGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGcc > 1:546598/1‑140 (MQ=255) acGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGcc > 2:555869/1‑140 (MQ=255) gCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAg > 1:183866/1‑140 (MQ=255) ccAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGa < 1:780010/140‑1 (MQ=255) ccAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGa < 2:403099/140‑1 (MQ=255) cAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGAc > 1:246396/1‑140 (MQ=255) cAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGAc < 1:642575/140‑1 (MQ=255) aGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACt < 2:137483/140‑1 (MQ=255) cAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGa < 2:785405/140‑1 (MQ=255) aaaaaCTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGAt < 2:635196/140‑1 (MQ=255) aaaCTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTc < 1:5346/140‑1 (MQ=255) aaaCTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTc < 2:666572/140‑1 (MQ=255) aCTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTccc > 2:669913/1‑140 (MQ=255) tGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGaa > 2:833750/1‑140 (MQ=255) gTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACg < 2:36101/140‑1 (MQ=255) gTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACg < 2:256785/140‑1 (MQ=255) gTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACg < 2:246396/140‑1 (MQ=255) gTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACg < 1:576241/140‑1 (MQ=255) ttCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGt < 2:244792/140‑1 (MQ=255) ttCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGt < 2:30167/140‑1 (MQ=255) tcaACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAAc < 2:188404/140‑1 (MQ=255) tCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGcc > 1:640266/1‑140 (MQ=255) gTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCacga > 2:1106978/1‑140 (MQ=255) gACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCa < 2:417512/140‑1 (MQ=255) tatCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATccc > 2:1050742/1‑140 (MQ=255) atCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACggg > 1:830212/1‑133 (MQ=255) atCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTCGTCAACATCAGCCACGACggg < 2:830212/133‑1 (MQ=255) cctccCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCccttc < 1:222814/140‑1 (MQ=255) ctccCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCccttcc < 2:546598/140‑1 (MQ=255) tccCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCccttcct < 2:183866/140‑1 (MQ=255) tccCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCccttcct < 2:651635/140‑1 (MQ=255) tccCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCccttcct < 1:1050742/140‑1 (MQ=255) tccCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCccttc > 1:1021732/1‑138 (MQ=255) tccCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCccttc < 2:1021732/138‑1 (MQ=255) tccCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCCGGTCAACATCAGCCACGACGGGCATCccttcct < 1:833750/140‑1 (MQ=255) ccAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCacga < 2:892673/123‑1 (MQ=255) ccAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCacga > 1:892673/1‑123 (MQ=255) ccAGCAGGGCACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCccttc < 1:937761/136‑1 (MQ=255) cACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAg > 1:1031401/1‑140 (MQ=255) cACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAg > 1:250052/1‑140 (MQ=255) cACCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAg > 1:82127/1‑140 (MQ=255) aCCCAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGc > 1:273641/1‑140 (MQ=255) ccAACGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGCGa < 2:198741/140‑1 (MQ=255) aaCGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGCGAcc < 1:1011980/140‑1 (MQ=255) cGTTGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGCGACcac < 1:392188/140‑1 (MQ=255) ttGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGCGACCACaa < 1:669913/140‑1 (MQ=255) ttGCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGCGACCACaa < 1:555869/140‑1 (MQ=255) gCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGCGACCACAAAt < 2:1031401/140‑1 (MQ=255) gCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGCGACCACAAAt < 1:107174/140‑1 (MQ=255) gCGTCATAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGCGACCACAAAt < 2:250052/140‑1 (MQ=255) tAGCCTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGCGACCACAAATGACAcc < 1:1106978/140‑1 (MQ=255) ccTCTCTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGCGACCACAAATGACACCTAc < 2:18964/140‑1 (MQ=255) ctctctCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGCGACCACAAATGACACCTACt < 1:7944/140‑1 (MQ=255) | ATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGCGACCACAAATGACACCTACT > NC_000913/4519309‑4519581 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |