Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,536,360 A→G intergenic (+329/+254) yjhR → / ← nanS KpLE2 phage‑like element; PLD‑like domain‑containing protein YjhR/N‑acetyl‑9‑O‑acetylneuraminate esterase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,536,3600AG100.0% 170.5 / NA 51intergenic (+329/+254)yjhR/nanSKpLE2 phage‑like element; PLD‑like domain‑containing protein YjhR/N‑acetyl‑9‑O‑acetylneuraminate esterase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (40/11);  total (40/11)

AATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTAAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTATGCGGTGCGCGTTTTTCACCCTTGTGCCAGATTATT  >  NC_000913/4536227‑4536493
                                                                                                                                     |                                                                                                                                     
aataatGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACtgt                                                                                                                                 >  2:112630/1‑140 (MQ=255)
  taatGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTgtgt                                                                                                                               >  2:628212/1‑140 (MQ=255)
  taatGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTgtgt                                                                                                                               >  2:250068/1‑140 (MQ=255)
  taatGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTgtgt                                                                                                                               >  2:1014673/1‑140 (MQ=255)
    atGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAg                                                                                                                             >  2:476077/1‑140 (MQ=255)
      ggCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGAt                                                                                                                           >  2:5238/1‑140 (MQ=255)
       gCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATg                                                                                                                          >  2:240070/1‑140 (MQ=255)
       gCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATg                                                                                                                          >  2:91267/1‑140 (MQ=255)
       gCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATg                                                                                                                          >  1:609785/1‑140 (MQ=255)
            aTTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATGATCGCCAGAACGGCATATCAGGACGGTACTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGt                                                                                                                     >  2:1046140/1‑140 (MQ=255)
            aTTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTCCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGt                                                                                                                     >  2:1046141/1‑140 (MQ=255)
                  ttGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGAttt                                                                                                               >  1:406662/1‑140 (MQ=255)
                       catcatTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAg                                                                                                          <  2:609785/140‑1 (MQ=255)
                          catTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAATGAACTGTGTAGATGTTCGTAGATTTCCGAGCCa                                                                                                       >  1:243019/1‑140 (MQ=255)
                          catTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACATTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCa                                                                                                       >  1:1096965/1‑140 (MQ=255)
                               aGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATc                                                                                                  >  1:850270/1‑140 (MQ=255)
                               aGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATc                                                                                                  >  1:1015745/1‑140 (MQ=255)
                                   tatCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGaaa                                                                                              >  1:15437/1‑140 (MQ=255)
                                    atcatcatcGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGcc                                                                                                        >  1:463997/1‑129 (MQ=255)
                                    atcatcatcGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGcc                                                                                                        <  2:463997/129‑1 (MQ=255)
                                    atcatcatcGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGaaaa                                                                                             >  1:1042777/1‑140 (MQ=255)
                                    atcatcatcGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGaaaa                                                                                             >  1:554876/1‑140 (MQ=255)
                                    atcatcatcGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGaaaa                                                                                             >  1:125895/1‑140 (MQ=255)
                                    atcatcatcGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGaaaa                                                                                             >  2:1052611/1‑140 (MQ=255)
                                    atcatcatcGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGaaaa                                                                                             >  1:91264/1‑140 (MQ=255)
                                        tcatcGTCTATTTGCCAGATTCCGTCGATTTATATTCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTCCGGGTAAACTGTGTAGATGTTGGTAGATTTCCGAGCCATAATCGAAAAGgcg                                                                                         <  2:902824/140‑1 (MQ=255)
                                          atcGTTTATTTGCCAGAACCCGTCGACTTATAACCGCAAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCAAAAACTTCCCAGTGAACTGTGTAGATGTTGGTAGATTTCCGAGCCATAATCGAAAAGGcgcg                                                                                       <  2:850339/140‑1 (MQ=255)
                                          atcGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGcgcg                                                                                       <  1:1046140/140‑1 (MQ=255)
                                          atcGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGcgcg                                                                                       <  1:1046141/140‑1 (MQ=255)
                                           tcGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCgg                                                                                      >  1:139783/1‑140 (MQ=255)
                                           tcGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCgg                                                                                      >  1:902824/1‑140 (MQ=255)
                                            cGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCAAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGcgcgta                                                                                     <  1:338798/140‑3 (MQ=255)
                                             gTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGAt                                                                                    <  2:850270/140‑1 (MQ=255)
                                             gTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGAt                                                                                    <  2:1015745/140‑1 (MQ=255)
                                             gTCTATTGGCCAGAACCCCGCGCTTTATAATCGCCAGAGCGGCATATCAGGCCGTGGCGGCAAAGGCTGTGGCCAAAAACGTTCCAGTGAATTGTGAAGATGTTCGAAGATTTCCGAGCCATAATCGAAAAGGCGCGGAt                                                                                    <  2:554876/140‑1 (MQ=255)
                                              tCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATg                                                                                   >  1:943428/1‑140 (MQ=255)
                                               cTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGt                                                                                  >  1:850339/1‑140 (MQ=255)
                                                tATTTGCCAAAATCCGTCGACTTATAACCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTc                                                                                 <  2:142289/140‑1 (MQ=255)
                                                     gCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTa                                                                            >  1:301908/1‑140 (MQ=255)
                                                     gCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTa                                                                            <  2:15437/140‑1 (MQ=255)
                                                      ccAGAATCCGTCGATTTATAATCGCCAGACCGGCATATCAGGAGGGTGCTGCGAACGCTGTGGCCAAAAACGTCCAAATGAACTGTGTAGATGTTCGTAGATTCCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTaa                                                                           <  2:243019/140‑1 (MQ=255)
                                                       cAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAg                                                                          >  2:964752/1‑140 (MQ=255)
                                                       cAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAg                                                                          >  2:990977/1‑140 (MQ=255)
                                                          aacccGTCGACTTATAATCGCAAAAACGGCTTATCAGGCCGGTGCTGGGAACGCTGTGGCCCAAAACGTCCCAGTGAGCTGTGAAGATGTGCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCa                                                                       <  2:1096965/137‑1 (MQ=255)
                                                          aaTCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCa                                                                       <  1:1057030/140‑1 (MQ=255)
                                                            tCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATc                                                                     <  1:964752/140‑1 (MQ=255)
                                                                tCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGc                                                                 >  1:1009549/1‑140 (MQ=255)
                                                                 cGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACTTTCCAGTGAACTGTGTAGTTTTTCGTATATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCt                                                                <  2:1039809/140‑1 (MQ=255)
                                                                  gACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTa                                                               <  2:406662/140‑1 (MQ=255)
                                                                         aaccGCAAGAACGGCATAGCAGGAGGGTGCTGCGAACGCTGTGGCCAAAACCGTTCCAGTGAACTGTGTAGATGTTCGTAGTTTCCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTa                                                        <  2:139783/137‑1 (MQ=255)
                                                                         aaTCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTa                                                        <  1:476077/140‑1 (MQ=255)
                                                                              ccAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCt                                                                <  1:847159/127‑1 (MQ=255)
                                                                              ccAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCt                                                                >  2:847159/1‑127 (MQ=255)
                                                                              ccAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCaa                                                   >  1:838528/1‑140 (MQ=255)
                                                                                     ggCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATaacaac                                            <  2:301908/140‑1 (MQ=255)
                                                                                         tatCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGtt                                        >  1:1141793/1‑140 (MQ=255)
                                                                                                    tgctgcGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAGTAACAACGGTTTATGCGGTgcg                             >  1:826587/1‑140 (MQ=255)
                                                                                                    tgctgcGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTATGCGGTgcg                             >  2:488746/1‑140 (MQ=255)
                                                                                                      ctgcGAACGCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTATGCGGTGcgcg                           >  2:742470/1‑140 (MQ=255)
                                                                                                              gCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTATGCGGTGCGCGTTTTTCAc                   >  1:93266/1‑140 (MQ=255)
                                                                                                              gCTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTATGCGGTGCGCGTTTTTCAc                   >  2:753722/1‑140 (MQ=255)
                                                                                                               cTGTGGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTATGCGGTGCGCGTTTTTCAcc                  <  1:240070/140‑1 (MQ=255)
                                                                                                                tgtgGCCCAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTATGCGGTGCGCGTTTTTCAccc                 <  1:742470/140‑1 (MQ=255)
                                                                                                                     cccAAAACGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTATGCGGTGCGCGTTTTTCACCCTtgtg            <  1:695685/140‑1 (MQ=255)
                                                                                                                      caaaacCGTTCCAGTGAACTGTGGAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTATGCGGTGCGCGTTTTTCACCCTTGTGc           <  2:838528/138‑1 (MQ=255)
                                                                                                                      caaaaaCGTTCCAGTGAACTGTTTAGATGTTCGTAGATTTCCGAGCCATAATCGAGAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTATGCGGTGCGCGTTTTTCACCCTTGTGc           <  1:405530/138‑1 (MQ=255)
                                                                                                                      caaaaaCGTCCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTATGCGGTGCGCGTTTTTCACCCTTGTGc           <  1:250068/138‑1 (MQ=255)
                                                                                                                        aaaaCGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTATGCGGTGCGCGTTTTTCACCCTTGTGCCa         <  1:488746/140‑1 (MQ=255)
                                                                                                                        aaaaCGTTCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTATGCGGTGCGCGTTTTTCACCCTTGTGCCa         <  2:1141793/140‑1 (MQ=255)
                                                                                                                          atcGTTCCGTTGAACTGTGTAGTTGTTCGTAGTTTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTATGCGGTGCGCGTTTTTCACCCTTGTGCCAGa       <  2:943428/138‑1 (MQ=255)
                                                                                                                               tCCAGTGAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTATGCGGTGCGCGTTTTTCACCCTTGTGCCAGattatt  >  1:1018345/1‑140 (MQ=255)
                                                                                                                                     |                                                                                                                                     
AATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTAAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTATGCGGTGCGCGTTTTTCACCCTTGTGCCAGATTATT  >  NC_000913/4536227‑4536493

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: