Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	41,373	A→G	L187L (TTG→CTG)	caiT ←	L‑carnitine:gamma‑butyrobetaine antiporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	41,373	0	A	G	100.0%	283.7 / NA	81	L187L (TTG→CTG)	caiT	L‑carnitine:gamma‑butyrobetaine antiporter
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (44/37);  total (44/37)

CAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAACCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCA  >  NC_000913/41239‑41508                                                                                                                                       |                                                                                                                                        cAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCtt                                                                                                                                    >  2:586304/1‑140 (MQ=255)   gTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTg                                                                                                                                  >  2:910878/1‑140 (MQ=255)       cAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCgt                                                                                                                              >  1:263312/1‑140 (MQ=255)         gggTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAGGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCgtgt                                                                                                                            >  2:730963/1‑140 (MQ=255)          ggTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGTTCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGtt                                                                                                                           <  2:362501/140‑1 (MQ=255)          ggTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGtt                                                                                                                           <  2:969487/140‑1 (MQ=255)             aTGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGttttt                                                                                                                        >  2:737440/1‑140 (MQ=255)              tGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGc                                                                                                                                <  2:799209/131‑1 (MQ=255)              tGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGc                                                                                                                                >  1:799209/1‑131 (MQ=255)              tGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTc                                                                                                                       >  2:520989/1‑140 (MQ=255)                   aaTGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCTGAACAGCCCTTTGGCGTGTTTTTCACCTa                                                                                                                  <  2:648571/140‑1 (MQ=255)                   aaTGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTa                                                                                                                  <  1:96777/140‑1 (MQ=255)                    aTGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTAc                                                                                                                 >  1:990455/1‑140 (MQ=255)                      gCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCa                                                                                                               >  1:238715/1‑140 (MQ=255)                      gCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCa                                                                                                               >  1:98054/1‑140 (MQ=255)                      gCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCa                                                                                                               >  1:778214/1‑140 (MQ=255)                      gCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCa                                                                                                               >  2:125778/1‑140 (MQ=255)                          aacaacCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCgg                                                                                                           <  1:528804/140‑1 (MQ=255)                          aacaacCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCgg                                                                                                           >  1:701712/1‑140 (MQ=255)                             aacCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCAc                                                                                                        <  2:733946/140‑1 (MQ=255)                             aacCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCAc                                                                                                        <  2:990455/140‑1 (MQ=255)                             aacCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCAc                                                                                                        <  1:706678/140‑1 (MQ=255)                             aacCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCAc                                                                                                        <  1:586304/140‑1 (MQ=255)                                          acTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGc                                                                                                             <  2:981566/122‑1 (MQ=255)                                          acTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGc                                                                                                             >  1:981566/1‑122 (MQ=255)                                          acTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTg                                                                                           >  1:184272/1‑140 (MQ=255)                                          acTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTg                                                                                           >  2:396356/1‑140 (MQ=255)                                            tCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTggg                                                                                         >  2:888164/1‑140 (MQ=255)                                            tCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTggg                                                                                         >  1:884305/1‑140 (MQ=255)                                             cGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTgggg                                                                                        >  1:341321/1‑140 (MQ=255)                                              ggTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGc                                                                                       >  1:747537/1‑140 (MQ=255)                                               gTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCg                                                                                      >  1:476290/1‑140 (MQ=255)                                               gTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCg                                                                                      >  1:727277/1‑140 (MQ=255)                                               gTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCg                                                                                      >  2:624024/1‑140 (MQ=255)                                               gTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCg                                                                                      >  2:896843/1‑140 (MQ=255)                                               gTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCg                                                                                      >  1:217281/1‑140 (MQ=255)                                                    cAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCa                                                                                 <  1:520989/140‑1 (MQ=255)                                                                 aGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCg                                                                    <  2:830932/140‑1 (MQ=255)                                                                   gCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGa                                                                  <  1:910878/140‑1 (MQ=255)                                                                   gCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGa                                                                  <  1:125778/140‑1 (MQ=255)                                                                    cccAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGAc                                                                 >  1:443483/1‑140 (MQ=255)                                                                    cccAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCGACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGAc                                                                 >  2:1047856/1‑140 (MQ=255)                                                                     ccAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACa                                                                <  2:263312/140‑1 (MQ=255)                                                                        gACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAaag                                                             <  1:415694/140‑1 (MQ=255)                                                                          cTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAaagaa                                                           <  1:730997/140‑1 (MQ=255)                                                                             gTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAaagaa                                                           <  1:579034/137‑1 (MQ=255)                                                                             gTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAaagaa                                                           >  2:579034/1‑137 (MQ=255)                                                                                   aTCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGGAGTAAGc                                                  >  2:760965/1‑140 (MQ=255)                                                                                   aTCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGc                                                  >  2:1171866/1‑140 (MQ=255)                                                                                   aTCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGc                                                  >  2:923740/1‑140 (MQ=255)                                                                                   aTCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGc                                                  >  2:542016/1‑140 (MQ=255)                                                                                   aTCGCGAAGATCAAGACGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGa                                                                  <  1:918585/124‑1 (MQ=255)                                                                                   aTCGCGAAGATCAAGACGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGa                                                                  >  2:918585/1‑124 (MQ=255)                                                                                    tCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCg                                                 <  2:727277/140‑1 (MQ=255)                                                                                                  gCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAg                                   <  2:778214/140‑1 (MQ=255)                                                                                                  gCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAg                                   <  2:701712/140‑1 (MQ=255)                                                                                                  gCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAg                                   <  1:1047856/140‑1 (MQ=255)                                                                                                   cgacgaGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGTTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAgg                                  <  2:807395/140‑1 (MQ=255)                                                                                                   cgacgaGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAgg                                  <  1:896843/140‑1 (MQ=255)                                                                                                   cgacgaGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAgg                                  <  2:1110179/140‑1 (MQ=255)                                                                                                      cgaGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAgg                                             >  1:1163120/1‑126 (MQ=255)                                                                                                      cgaGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAgg                                             <  2:1163120/126‑1 (MQ=255)                                                                                                      cgaGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAg                               >  1:1147491/1‑140 (MQ=255)                                                                                                      cgaGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAg                               >  1:1049229/1‑140 (MQ=255)                                                                                                      cgaGATAGAAGTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTG‑TTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGc                              >  1:827851/1‑140 (MQ=255)                                                                                                        agaTAGAAGTTGTCGATGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGCt                             <  2:1049229/140‑1 (MQ=255)                                                                                                                gTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGCTGTAAGTgg                     <  1:396356/140‑1 (MQ=255)                                                                                                                gTTGTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGCTGTAAGTgg                     <  1:888164/140‑1 (MQ=255)                                                                                                                   gTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAgg                                  >  2:756226/1‑124 (MQ=255)                                                                                                                   gTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAgg                                  <  1:756226/124‑1 (MQ=255)                                                                                                                   gTCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGCTGTAAGTGGccc                  >  2:1079611/1‑140 (MQ=255)                                                                                                                    tCGACGATAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGCTGTAAGTGGCCCa                 >  1:996146/1‑140 (MQ=255)                                                                                                                     cgacgaTAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGCTGTAAGTGGCCCAc                <  2:184272/140‑1 (MQ=255)                                                                                                                       acgaTAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGCTGTAAGTGGCCCACgg              <  1:923740/140‑1 (MQ=255)                                                                                                                        cgaTAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGCTGTAAGTGGCCCACGGc             >  2:890859/1‑140 (MQ=255)                                                                                                                         gaTAGTGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGC‑ACTGAAAGGAAGCTGTAAGTGGCCCACGGCag           <  1:624024/140‑1 (MQ=255)                                                                                                                              tGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGt       >  2:617872/1‑140 (MQ=255)                                                                                                                              tGCCGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGt       >  1:982438/1‑140 (MQ=255)                                                                                                                                ccGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTcc     >  2:866148/1‑140 (MQ=255)                                                                                                                                ccGAACAGCCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTcc     <  2:884305/140‑1 (MQ=255)                                                                                                                                ccGAACAGCCCTTTGGCGTG‑TTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTccc    <  2:827851/140‑1 (MQ=255)                                                                                                                                   aacagcCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCa  >  1:970716/1‑140 (MQ=255)                                                                                                                                   aacagcCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCa  >  2:476075/1‑140 (MQ=255)                                                                                                                                       |                                                                                                                                        CAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCATCGCGAAGATCAAGGCGACGAGATAGAAGTTGTCGACGATAGTGCCGAACAACCCTTTGGCGTGTTTTTCACCTACCAGCGGCACCAGTGTCGAGCTGGGGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCA  >  NC_000913/41239‑41508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑