Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,772,160	T→C	intergenic (‑6/+7)	yfjU ← / ← yfjV	CP4‑57 prophage; ArsC family protein YfjU/CP4‑57 prophage; putative arsenite transporter, N‑terminal fragment

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,772,160	0	T	C	100.0%	307.9 / NA	87	intergenic (‑6/+7)	yfjU/yfjV	CP4‑57 prophage; ArsC family protein YfjU/CP4‑57 prophage; putative arsenite transporter, N‑terminal fragment
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (47/40);  total (47/40)

TTCATCACGGGTCGGTGGCATATCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGC  >  NC_000913/2772026‑2772296                                                                                                                                       |                                                                                                                                         ttCATCACGGGTCGGTGGCATATCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTa                                                                                                                                     >  2:411678/1‑140 (MQ=255)  tcatcaCGGGTCGGTGGCATATCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTaa                                                                                                                                    >  2:723983/1‑140 (MQ=255)     tcaCGGGTCGGTGGCATATCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTa                                                                                                                                 <  1:721518/140‑1 (MQ=255)         gggTCGGTGGCATATCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACaaa                                                                                                                             <  2:959213/140‑1 (MQ=255)          ggTCGGTGGCATATCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAg                                                                                                                            <  1:993515/140‑1 (MQ=255)           gTCGGTGGCATATCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACa                                                                                                                               >  2:368026/1‑136 (MQ=255)           gTCGGTGGCATATCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACa                                                                                                                               <  1:368026/136‑1 (MQ=255)           gTCGGTGGCATATCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGt                                                                                                                           >  1:568976/1‑140 (MQ=255)           gTCGGTGGCATATCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGt                                                                                                                           >  2:499675/1‑140 (MQ=255)              ggTGGCATATCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTa                                                                                                                                 >  2:37094/1‑131 (MQ=255)              ggTGGCATATCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTa                                                                                                                                 <  1:37094/131‑1 (MQ=255)               gTGGCATATCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACa                                                                                                                       >  2:896531/1‑140 (MQ=255)               gTGGCATATCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACa                                                                                                                       >  1:269907/1‑140 (MQ=255)                tGGCATATCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACag                                                                                                                      >  2:172562/1‑140 (MQ=255)                tGGCATATCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACa                                                                                                                       <  2:636037/139‑1 (MQ=255)                tGGCATATCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACa                                                                                                                       >  1:636037/1‑139 (MQ=255)                   cATATCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACagaga                                                                                                                   <  1:326810/140‑1 (MQ=255)                     tatCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAgc                                                                                                                 >  1:956725/1‑140 (MQ=255)                     tatCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAgc                                                                                                                 >  1:122010/1‑140 (MQ=255)                          agaTAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCcgcca                                                                                                            >  1:212591/1‑140 (MQ=255)                          agaTAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCcgcca                                                                                                            <  1:172562/140‑1 (MQ=255)                                ttaattaTTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAg                                                                                                      <  2:122010/140‑1 (MQ=255)                                  aattaTTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAgcg                                                                                                    <  2:956725/140‑1 (MQ=255)                                     tattGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCgg                                                                                                 >  2:312064/1‑140 (MQ=255)                                      attGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGc                                                                                                <  1:723983/140‑1 (MQ=255)                                        tGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCa                                                                                              <  2:625985/140‑1 (MQ=255)                                        tGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCa                                                                                              >  1:221717/1‑140 (MQ=255)                                          tCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCaga                                                                                            >  2:211986/1‑140 (MQ=255)                                          tCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCaga                                                                                            >  1:579841/1‑140 (MQ=255)                                          gtcgtttgTTGACGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCaga                                                                                            >  2:851112/8‑140 (MQ=25)                                           tcgTTTGTTGACGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCagag                                                                                           <  1:851112/138‑1 (MQ=255)                                            ggTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGt                                                                                          >  2:27270/1‑140 (MQ=255)                                             gTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTg                                                                                         <  2:546102/140‑1 (MQ=255)                                             gTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTg                                                                                         >  2:446816/1‑140 (MQ=255)                                                     ccGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAg                                                                                 <  1:446816/140‑1 (MQ=255)                                                      cGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGc                                                                                >  2:184514/1‑140 (MQ=255)                                                        ttgttATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCAc                                                                              <  1:211986/140‑1 (MQ=255)                                                        ttgttATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCAc                                                                              <  1:718054/140‑1 (MQ=255)                                                          gttATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCg                                                                            >  1:153590/1‑140 (MQ=255)                                                            tATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGc                                                                          <  2:87592/140‑1 (MQ=255)                                                            tATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGc                                                                          <  1:27270/140‑1 (MQ=255)                                                            tATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGc                                                                          <  1:312064/140‑1 (MQ=255)                                                             aTGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGca                                                                         >  2:720256/1‑140 (MQ=255)                                                             aTGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGca                                                                         <  2:579841/140‑1 (MQ=255)                                                             aTGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGca                                                                         <  2:781317/140‑1 (MQ=255)                                                             aTGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGca                                                                         <  1:1054191/140‑1 (MQ=255)                                                             aTGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGca                                                                         <  1:720256/140‑1 (MQ=255)                                                               gAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGcaca                                                                       <  2:221717/140‑1 (MQ=255)                                                                 aGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGt                                                                     <  2:134970/140‑1 (MQ=255)                                                                 aGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGt                                                                     <  1:499675/140‑1 (MQ=255)                                                                   cATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGc                                                                          >  2:1143358/1‑133 (MQ=255)                                                                   cATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGc                                                                          <  1:1143358/133‑1 (MQ=255)                                                                     tctcCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATg                                                                 >  2:1102632/1‑140 (MQ=255)                                                                     tctcCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATg                                                                 >  1:361663/1‑140 (MQ=255)                                                                     tctcCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATg                                                                 >  1:601976/1‑140 (MQ=255)                                                                           gCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATg                                                           >  1:771001/1‑140 (MQ=255)                                                                             gtgtTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGcc                                                         >  2:507798/1‑140 (MQ=255)                                                                                ttGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACGGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGt                                                      >  2:186386/1‑140 (MQ=255)                                                                                ttGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGt                                                      >  1:953090/1‑140 (MQ=255)                                                                                 tGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTa                                                     <  2:771001/140‑1 (MQ=255)                                                                                 tGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTa                                                     <  2:153590/140‑1 (MQ=255)                                                                                   cGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACg                                                   >  1:147220/1‑140 (MQ=255)                                                                                   cGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACg                                                   >  1:801606/1‑140 (MQ=255)                                                                                    gTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACgg                                                  <  1:338119/140‑1 (MQ=255)                                                                                     tGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGa                                                 <  1:33497/140‑1 (MQ=255)                                                                                      gAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGaa                                                >  1:503530/1‑140 (MQ=255)                                                                                         gTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTa                                             >  2:650955/1‑140 (MQ=255)                                                                                         gTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTa                                             <  1:411678/140‑1 (MQ=255)                                                                                            ccACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAata                                          >  1:258897/1‑140 (MQ=255)                                                                                               caGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATcc                                       <  2:286616/140‑1 (MQ=255)                                                                                                  gCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCa                                    >  2:1083734/1‑140 (MQ=255)                                                                                                  gCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCa                                    >  2:484456/1‑140 (MQ=255)                                                                                                  gCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCa                                    >  1:689750/1‑140 (MQ=255)                                                                                                                 aTGGTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATAtt                     >  2:160638/1‑140 (MQ=255)                                                                                                                   ggTAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATAtttt                   >  1:408319/1‑140 (MQ=255)                                                                                                                     tAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTc                 >  2:394986/1‑140 (MQ=255)                                                                                                                     tAATGTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTc                 >  1:251121/1‑140 (MQ=255)                                                                                                                         gTTGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTggg             <  2:147220/140‑1 (MQ=255)                                                                                                                          ttGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGc            >  1:438369/1‑140 (MQ=255)                                                                                                                          ttGCTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGc            <  1:1083734/140‑1 (MQ=255)                                                                                                                             cTCATATCAGCATCTAATTACAAAGTGACGGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAg         <  1:186386/140‑1 (MQ=255)                                                                                                                             cTCATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAg         >  2:345530/1‑140 (MQ=255)                                                                                                                               cATATCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGca       >  1:1064415/1‑140 (MQ=255)                                                                                                                                  atCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACAt    <  1:650955/140‑1 (MQ=255)                                                                                                                                   tCAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATg   <  1:896531/140‑1 (MQ=255)                                                                                                                                    cAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGc  <  2:380867/140‑1 (MQ=255)                                                                                                                                    cAGCATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGc  >  1:263675/1‑140 (MQ=255)                                                                                                                                       |                                                                                                                                         TTCATCACGGGTCGGTGGCATATCGAGATAATTAATTATTGTCGGTTCGTTGCCGTTGTTATGAAGCATCTCCAGCGTGTTGCGTGAGGTGCCACAGGCCGGGTTGTGATAGATGGTAATGTTGCTCATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGC  >  NC_000913/2772026‑2772296

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑