Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,037,809	(GT)5→4	noncoding (291‑292/2905 nt)	rrlA →	23S ribosomal RNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,037,801	0	G	.	100.0%	138.2 / NA	72	noncoding (283/2905 nt)	rrlA	23S ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base . (29/43);  total (29/43)
*	NC_000913	4,037,802	0	T	.	100.0%	138.2 / NA	72	noncoding (284/2905 nt)	rrlA	23S ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (29/43);  total (29/43)

GAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCA  >  NC_000913/4037693‑4037933                                                                                                             ||                                                                                                                                    gAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGt                                                                                                     <  1:490425/140‑1 (MQ=2)  aGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTg                                                                                                    <  2:278311/140‑1 (MQ=9)   ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGc                                                                                                   <  2:593695/140‑1 (MQ=12)     cGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGa                                                                                                 <  2:98291/140‑1 (MQ=16)     cGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGa                                                                                                 >  2:326689/1‑140 (MQ=12)          cGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAg                                                                                            <  2:102366/140‑1 (MQ=16)                 aCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACa                                                                                     <  2:343817/140‑1 (MQ=16)                 aCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACa                                                                                     <  2:824079/140‑1 (MQ=12)                        cATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGt                                                                              <  2:735660/140‑1 (MQ=16)                         aTCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTa                                                                             <  1:378798/140‑1 (MQ=16)                           cTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTaca                                                                           <  1:790059/140‑1 (MQ=16)                                 aCCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACaaaaa                                                                     <  1:418593/140‑1 (MQ=16)                                 aCCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACaaaaa                                                                     <  2:189127/140‑1 (MQ=16)                                   cccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATg                                                                   >  1:1069154/1‑140 (MQ=12)                                   cccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATg                                                                   >  2:424012/1‑140 (MQ=12)                                   cccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATg                                                                   >  1:605778/1‑140 (MQ=12)                                    ccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGc                                                                  >  2:167524/1‑140 (MQ=12)                                     cGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGca                                                                 >  2:775235/1‑140 (MQ=12)                                     cGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGca                                                                 >  1:283367/1‑140 (MQ=12)                                     cGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGca                                                                 >  2:196698/1‑140 (MQ=12)                                     cGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGca                                                                 >  2:207279/1‑140 (MQ=12)                                     cGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGca                                                                 >  2:930855/1‑140 (MQ=12)                                     cGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGca                                                                 >  2:442358/1‑140 (MQ=12)                                     cGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGca                                                                 >  2:503363/1‑140 (MQ=12)                                       aGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGcaca                                                               <  2:642491/140‑1 (MQ=16)                                       aGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGcaca                                                               >  1:816555/1‑140 (MQ=12)                                       aGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGcaca                                                               <  2:605778/140‑1 (MQ=16)                                        ggAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACAt                                                              >  2:122516/1‑140 (MQ=12)                                        ggAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACAt                                                              >  1:810128/1‑140 (MQ=12)                                                 aTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGc                                                     <  1:442358/140‑1 (MQ=12)                                                   cAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTc                                                   >  2:1026887/1‑140 (MQ=12)                                                    aaCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCg                                                  <  2:1093583/140‑1 (MQ=12)                                                    aaCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCg                                                  >  2:294774/1‑140 (MQ=12)                                                        gagaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGa                                              <  1:1026887/140‑1 (MQ=12)                                                           aTTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGGGTa                                           >  2:313820/1‑140 (MQ=255)                                                                cccAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGc                                                     <  2:721189/125‑1 (MQ=12)                                                                cccAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGc                                                     >  1:721189/1‑125 (MQ=12)                                                                cccAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCg                                      >  2:1032036/1‑140 (MQ=12)                                                                cccAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCg                                      <  1:769508/140‑1 (MQ=12)                                                                    gTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGac                                  <  2:151686/140‑1 (MQ=12)                                                                    gTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGac                                  <  1:930855/140‑1 (MQ=12)                                                                    gTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGac                                  <  2:1093074/140‑1 (MQ=12)                                                                    gTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGac                                  <  1:196698/140‑1 (MQ=12)                                                                    gTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGac                                  <  2:39780/140‑1 (MQ=12)                                                                     tAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCggg                                    >  2:475084/1‑137 (MQ=12)                                                                     tAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCggg                                    <  1:475084/137‑1 (MQ=12)                                                                        cggcgAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGt                              >  1:600118/1‑140 (MQ=12)                                                                         ggcgAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTg                             >  1:482583/1‑140 (MQ=12)                                                                          gcgagcgaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTgg                            >  1:557910/1‑140 (MQ=12)                                                                          gcgagcgaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTgg                            <  1:503363/140‑1 (MQ=12)                                                                             agcgaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTAt                         <  2:283367/140‑1 (MQ=12)                                                                             agcgaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTAt                         <  1:235852/140‑1 (MQ=12)                                                                              gcgaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATc                        <  1:1009432/140‑1 (MQ=12)                                                                              gcgaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATc                        <  1:523219/140‑1 (MQ=12)                                                                              gcgaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATc                        <  1:1032036/140‑1 (MQ=12)                                                                              gcgaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATc                        <  2:378125/140‑1 (MQ=12)                                                                               cgaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATcc                       >  1:130740/1‑140 (MQ=12)                                                                               cgaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATcc                       <  1:424012/140‑1 (MQ=12)                                                                                 aaCGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTg                     >  2:589003/1‑140 (MQ=12)                                                                                        agcagcCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAat              <  1:580582/140‑1 (MQ=12)                                                                                        agcagcCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAat              <  2:130740/140‑1 (MQ=12)                                                                                            gcCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATgg          >  2:851258/1‑140 (MQ=12)                                                                                            gcCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATgg          <  1:519082/140‑1 (MQ=12)                                                                                            gcCCAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATgg          >  2:940623/1‑140 (MQ=12)                                                                                              ccAGAGCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATgggg        >  2:141729/1‑140 (MQ=12)                                                                                                 gagCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGa     <  2:967298/140‑1 (MQ=12)                                                                                                 gagCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGCGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGa     <  2:958809/140‑1 (MQ=255)                                                                                                  agCCTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCAGGACACGTGGTATCCTGTCTGAATATGGGGGGAc    <  2:976325/140‑1 (MQ=255)                                                                                                    ccTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCa  <  1:75592/140‑1 (MQ=12)                                                                                                    ccTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCa  <  1:167524/140‑1 (MQ=12)                                                                                                    ccTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCa  <  1:785291/140‑1 (MQ=12)                                                                                                    ccTGAATCA‑‑GTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCa  <  1:117905/140‑1 (MQ=12)                                                                                                             ||                                                                                                                                    GAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCA  >  NC_000913/4037693‑4037933

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑